RNA–Protein interactions for RNA: ENST00000485830.1

PGAP1-211, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 1 (best)

Gene PGAP1, Length 1,222 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-211ENST00000485830 AEBP2Q6ZN18 517 aaPredicted RBP24.17■■□□□ 1.46
PGAP1-211ENST00000485830 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
PGAP1-211ENST00000485830 SENP3Q9H4L4 574 aaPredicted RBP20.61■□□□□ 0.89
PGAP1-211ENST00000485830 PHF23Q9BUL5 403 aaPredicted RBP20.3■□□□□ 0.84
PGAP1-211ENST00000485830 FOXD1Q16676 465 aa19.34■□□□□ 0.69
PGAP1-211ENST00000485830 POTEDQ86YR6 584 aa18.85■□□□□ 0.61
PGAP1-211ENST00000485830 MSH5O43196 834 aa18.24■□□□□ 0.51
PGAP1-211ENST00000485830 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
PGAP1-211ENST00000485830 PIAS4Q8N2W9 510 aaPredicted RBP17.88■□□□□ 0.45
PGAP1-211ENST00000485830 PPP6R1Q9UPN7 881 aa17.72■□□□□ 0.43
PGAP1-211ENST00000485830 ADRA2BP18089 450 aa17.7■□□□□ 0.42
PGAP1-211ENST00000485830 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
PGAP1-211ENST00000485830 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
PGAP1-211ENST00000485830 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
PGAP1-211ENST00000485830 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
PGAP1-211ENST00000485830 PPP4R3CPQ6ZMV5 832 aa15.99■□□□□ 0.15
PGAP1-211ENST00000485830 CNKSR2Q8WXI2 1034 aa15.64■□□□□ 0.09
PGAP1-211ENST00000485830 DCAF8L1A6NGE4 600 aa15.58■□□□□ 0.08
PGAP1-211ENST00000485830 RNF39Q9H2S5 420 aa15.56■□□□□ 0.08
PGAP1-211ENST00000485830 HOXD11P31277 338 aaPredicted RBP15.51■□□□□ 0.07
PGAP1-211ENST00000485830 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
PGAP1-211ENST00000485830 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
PGAP1-211ENST00000485830 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
PGAP1-211ENST00000485830 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
PGAP1-211ENST00000485830 KCNA4P22459 653 aa15.07■□□□□ 0
PGAP1-211ENST00000485830 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
PGAP1-211ENST00000485830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.84□□□□□ -0.035e-7■□□□□ 9.5
PGAP1-211ENST00000485830 POTEHQ6S545 545 aa14.63□□□□□ -0.07
PGAP1-211ENST00000485830 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.09
PGAP1-211ENST00000485830 SLC4A2P04920 1241 aa14.46□□□□□ -0.09
PGAP1-211ENST00000485830 DSG3P32926 999 aa14.39□□□□□ -0.11
PGAP1-211ENST00000485830 SPINK5Q9NQ38 1064 aaPredicted RBP14.35□□□□□ -0.11
PGAP1-211ENST00000485830 CAPN15O75808 1086 aa14.28□□□□□ -0.12
PGAP1-211ENST00000485830 SLC4A1APQ9BWU0 796 aaKnown RBP14.27□□□□□ -0.13
PGAP1-211ENST00000485830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.16□□□□□ -0.14
PGAP1-211ENST00000485830 HNRNPUL2Q1KMD3 747 aaKnown RBP14.16□□□□□ -0.14
PGAP1-211ENST00000485830 APLP2Q06481 763 aa14.14□□□□□ -0.15
PGAP1-211ENST00000485830 SAMD1Q6SPF0 538 aaPredicted RBP14.09□□□□□ -0.15
PGAP1-211ENST00000485830 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
PGAP1-211ENST00000485830 MYCNP04198 464 aaPredicted RBP14.07□□□□□ -0.16
PGAP1-211ENST00000485830 ZNF219Q9P2Y4 722 aaPredicted RBP14.03□□□□□ -0.16
PGAP1-211ENST00000485830 FOXD4L1Q9NU39 408 aa14.01□□□□□ -0.17
PGAP1-211ENST00000485830 ABCB7O75027 752 aa13.96□□□□□ -0.17
PGAP1-211ENST00000485830 ZBTB22O15209 634 aa13.87□□□□□ -0.19
PGAP1-211ENST00000485830 ATF5Q9Y2D1 282 aaPredicted RBP13.73□□□□□ -0.21
PGAP1-211ENST00000485830 POLA2Q14181 598 aa13.7□□□□□ -0.22
PGAP1-211ENST00000485830 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
PGAP1-211ENST00000485830 CHRDL2Q6WN34 429 aa13.64□□□□□ -0.23
PGAP1-211ENST00000485830 EHMT2Q96KQ7 1210 aa13.54□□□□□ -0.24
PGAP1-211ENST00000485830 ATXN8OSP0DMR3 200 aa13.52□□□□□ -0.25
PGAP1-211ENST00000485830 CSRNP3Q8WYN3 585 aa13.46□□□□□ -0.25
PGAP1-211ENST00000485830 SP7Q8TDD2 431 aaPredicted RBP13.44□□□□□ -0.26
PGAP1-211ENST00000485830 ZBTB12Q9Y330 459 aaPredicted RBP13.44□□□□□ -0.26
PGAP1-211ENST00000485830 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
PGAP1-211ENST00000485830 AKT1S1Q96B36 256 aa13.27□□□□□ -0.29
PGAP1-211ENST00000485830 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
PGAP1-211ENST00000485830 FBLN2P98095 1184 aa13.2□□□□□ -0.3
PGAP1-211ENST00000485830 REM2Q8IYK8 340 aaPredicted RBP13.17□□□□□ -0.3
PGAP1-211ENST00000485830 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
PGAP1-211ENST00000485830 HAX1O00165 279 aa13.08□□□□□ -0.32
PGAP1-211ENST00000485830 PITPNM1O00562 1244 aa13.05□□□□□ -0.32
PGAP1-211ENST00000485830 FXR2P51116 673 aaKnown RBP eCLIP13.05□□□□□ -0.32
PGAP1-211ENST00000485830 SPDYE2BA6NHP3 402 aa13.03□□□□□ -0.32
PGAP1-211ENST00000485830 SPDYE6P0CI01 402 aa13.03□□□□□ -0.32
PGAP1-211ENST00000485830 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
PGAP1-211ENST00000485830 EVX2Q03828 476 aa12.98□□□□□ -0.33
PGAP1-211ENST00000485830 ZNF692Q9BU19 519 aaPredicted RBP12.91□□□□□ -0.34
PGAP1-211ENST00000485830 SSUH2Q9Y2M2 353 aa12.87□□□□□ -0.35
PGAP1-211ENST00000485830 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
PGAP1-211ENST00000485830 SPDYE1Q8NFV5 336 aaPredicted RBP12.77□□□□□ -0.37
PGAP1-211ENST00000485830 PABPN1Q86U42 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
PGAP1-211ENST00000485830 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
PGAP1-211ENST00000485830 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
PGAP1-211ENST00000485830 GABBR2O75899 941 aa12.6□□□□□ -0.39
PGAP1-211ENST00000485830 LHX8Q68G74 356 aa12.59□□□□□ -0.39
PGAP1-211ENST00000485830 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
PGAP1-211ENST00000485830 PRR29P0C7W0 189 aa12.56□□□□□ -0.4
PGAP1-211ENST00000485830 CHADLQ6NUI6 762 aa12.51□□□□□ -0.41
PGAP1-211ENST00000485830 STAG3Q9UJ98 1225 aa12.4□□□□□ -0.42
PGAP1-211ENST00000485830 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
PGAP1-211ENST00000485830 PROM2Q8N271 834 aa12.33□□□□□ -0.44
PGAP1-211ENST00000485830 FARP1Q9Y4F1 1045 aaPredicted RBP12.31□□□□□ -0.44
PGAP1-211ENST00000485830 CREBZFQ9NS37 354 aa12.28□□□□□ -0.44
PGAP1-211ENST00000485830 CD44P16070 742 aaKnown RBP12.23□□□□□ -0.45
PGAP1-211ENST00000485830 PLSCR2Q9NRY7 297 aa12.23□□□□□ -0.45
PGAP1-211ENST00000485830 FKBP8Q14318 412 aa12.14□□□□□ -0.47
PGAP1-211ENST00000485830 CLCN6P51797 869 aa12.13□□□□□ -0.47
PGAP1-211ENST00000485830 DCBLD2Q96PD2 775 aa12.08□□□□□ -0.48
PGAP1-211ENST00000485830 ZRANB1Q9UGI0 708 aa12.08□□□□□ -0.48
PGAP1-211ENST00000485830 NPM1P06748 294 aaKnown RBP eCLIP12.07□□□□□ -0.48
PGAP1-211ENST00000485830 MNX1P50219 401 aaPredicted RBP12.07□□□□□ -0.48
PGAP1-211ENST00000485830 ZNF579Q8NAF0 562 aaKnown RBP12.04□□□□□ -0.48
PGAP1-211ENST00000485830 PAK3O75914 559 aaPredicted RBP12.02□□□□□ -0.49
PGAP1-211ENST00000485830 OTUD5Q96G74 571 aa12.01□□□□□ -0.49
PGAP1-211ENST00000485830 PLEKHG5O94827 1062 aa11.98□□□□□ -0.49
PGAP1-211ENST00000485830 MIER1Q8N108 512 aa11.98□□□□□ -0.49
PGAP1-211ENST00000485830 POTEB2H3BUK9 544 aa11.96□□□□□ -0.49
PGAP1-211ENST00000485830 GALR2O43603 387 aaPredicted RBP11.95□□□□□ -0.5
PGAP1-211ENST00000485830 PHF12Q96QT6 1004 aa11.94□□□□□ -0.5
PGAP1-211ENST00000485830 PLCD3Q8N3E9 789 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms