RNA–Protein interactions for RNA: ENST00000485709.1

C1D-207, Transcript of C1D nuclear receptor corepressor, humanhuman

TSL 3

Gene C1D, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1D-207ENST00000485709 AEBP2Q6ZN18 517 aaPredicted RBP27.99■■■□□ 2.07
C1D-207ENST00000485709 CHIC1Q5VXU3 224 aa26.62■■□□□ 1.85
C1D-207ENST00000485709 SENP3Q9H4L4 574 aaPredicted RBP23.8■■□□□ 1.4
C1D-207ENST00000485709 PHF23Q9BUL5 403 aaPredicted RBP23.54■■□□□ 1.36
C1D-207ENST00000485709 FOXD1Q16676 465 aa22.21■■□□□ 1.15
C1D-207ENST00000485709 POTEDQ86YR6 584 aa21.39■■□□□ 1.01
C1D-207ENST00000485709 PLPPR3Q6T4P5 718 aa21.28■■□□□ 1
C1D-207ENST00000485709 PPP6R1Q9UPN7 881 aa20.87■□□□□ 0.93
C1D-207ENST00000485709 ADRA2BP18089 450 aa20.79■□□□□ 0.92
C1D-207ENST00000485709 PIAS4Q8N2W9 510 aaPredicted RBP20.75■□□□□ 0.91
C1D-207ENST00000485709 MSH5O43196 834 aa20.7■□□□□ 0.9
C1D-207ENST00000485709 MAPK8IP2Q13387 824 aaPredicted RBP19.09■□□□□ 0.65
C1D-207ENST00000485709 SCAF1Q9H7N4 1312 aaKnown RBP18.96■□□□□ 0.63
C1D-207ENST00000485709 DMRT2Q9Y5R5 561 aa18.9■□□□□ 0.62
C1D-207ENST00000485709 PPP4R3CPQ6ZMV5 832 aa18.69■□□□□ 0.58
C1D-207ENST00000485709 CNKSR2Q8WXI2 1034 aa18.3■□□□□ 0.52
C1D-207ENST00000485709 HOXD11P31277 338 aaPredicted RBP18.24■□□□□ 0.51
C1D-207ENST00000485709 DCAF8L1A6NGE4 600 aa18.12■□□□□ 0.49
C1D-207ENST00000485709 RNF216Q9NWF9 866 aaPredicted RBP18.12■□□□□ 0.49
C1D-207ENST00000485709 NCBP3Q53F19 620 aaKnown RBP17.96■□□□□ 0.47
C1D-207ENST00000485709 CACNB1Q02641 598 aaPredicted RBP17.87■□□□□ 0.45
C1D-207ENST00000485709 NPM3O75607 178 aaKnown RBP17.74■□□□□ 0.43
C1D-207ENST00000485709 RNF39Q9H2S5 420 aa17.71■□□□□ 0.43
C1D-207ENST00000485709 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
C1D-207ENST00000485709 KCNA4P22459 653 aa17.49■□□□□ 0.39
C1D-207ENST00000485709 C1QBPQ07021 282 aaKnown RBP17.43■□□□□ 0.38
C1D-207ENST00000485709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.37■□□□□ 0.37
C1D-207ENST00000485709 U3KPZ7 1027 aaPredicted RBP17.04■□□□□ 0.32
C1D-207ENST00000485709 SLC4A2P04920 1241 aa16.95■□□□□ 0.3
C1D-207ENST00000485709 SPINK5Q9NQ38 1064 aaPredicted RBP16.78■□□□□ 0.28
C1D-207ENST00000485709 CAPN15O75808 1086 aa16.71■□□□□ 0.27
C1D-207ENST00000485709 DSG3P32926 999 aa16.62■□□□□ 0.25
C1D-207ENST00000485709 POTEHQ6S545 545 aa16.54■□□□□ 0.24
C1D-207ENST00000485709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.52■□□□□ 0.24
C1D-207ENST00000485709 HNRNPUL2Q1KMD3 747 aaKnown RBP16.52■□□□□ 0.24
C1D-207ENST00000485709 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
C1D-207ENST00000485709 APLP2Q06481 763 aa16.49■□□□□ 0.23
C1D-207ENST00000485709 TRHP20396 242 aaPredicted RBP16.48■□□□□ 0.23
C1D-207ENST00000485709 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
C1D-207ENST00000485709 ZNF219Q9P2Y4 722 aaPredicted RBP16.42■□□□□ 0.22
C1D-207ENST00000485709 MYCNP04198 464 aaPredicted RBP16.38■□□□□ 0.21
C1D-207ENST00000485709 ABCB7O75027 752 aa16.35■□□□□ 0.21
C1D-207ENST00000485709 FOXD4L1Q9NU39 408 aa16.26■□□□□ 0.19
C1D-207ENST00000485709 ZBTB22O15209 634 aa16.1■□□□□ 0.17
C1D-207ENST00000485709 POLA2Q14181 598 aa16.06■□□□□ 0.16
C1D-207ENST00000485709 ATF5Q9Y2D1 282 aaPredicted RBP16.06■□□□□ 0.16
C1D-207ENST00000485709 RBM42Q9BTD8 480 aaKnown RBP15.8■□□□□ 0.12
C1D-207ENST00000485709 ATXN8OSP0DMR3 200 aa15.74■□□□□ 0.11
C1D-207ENST00000485709 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
C1D-207ENST00000485709 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
C1D-207ENST00000485709 AKT1S1Q96B36 256 aa15.48■□□□□ 0.07
C1D-207ENST00000485709 CHRDL2Q6WN34 429 aa15.46■□□□□ 0.07
C1D-207ENST00000485709 CSRNP3Q8WYN3 585 aa15.42■□□□□ 0.06
C1D-207ENST00000485709 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
C1D-207ENST00000485709 REM2Q8IYK8 340 aaPredicted RBP15.36■□□□□ 0.05
C1D-207ENST00000485709 FBLN2P98095 1184 aa15.35■□□□□ 0.05
C1D-207ENST00000485709 MKRN4PQ13434 485 aaPredicted RBP15.31■□□□□ 0.04
C1D-207ENST00000485709 SPDYE2BA6NHP3 402 aa15.23■□□□□ 0.03
C1D-207ENST00000485709 SPDYE6P0CI01 402 aa15.23■□□□□ 0.03
C1D-207ENST00000485709 SPDYE2Q495Y8 402 aa15.23■□□□□ 0.03
C1D-207ENST00000485709 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
C1D-207ENST00000485709 PIP4P2Q8N4L2 257 aa15.12■□□□□ 0.01
C1D-207ENST00000485709 ZNF692Q9BU19 519 aaPredicted RBP15.08■□□□□ 0
C1D-207ENST00000485709 SSUH2Q9Y2M2 353 aa15.06■□□□□ 0
C1D-207ENST00000485709 SP7Q8TDD2 431 aaPredicted RBP15.05■□□□□ -0
C1D-207ENST00000485709 FXR2P51116 673 aaKnown RBP eCLIP15.04■□□□□ -0
C1D-207ENST00000485709 SPDYE1Q8NFV5 336 aaPredicted RBP14.95□□□□□ -0.02
C1D-207ENST00000485709 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
C1D-207ENST00000485709 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
C1D-207ENST00000485709 HAX1O00165 279 aa14.82□□□□□ -0.04
C1D-207ENST00000485709 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
C1D-207ENST00000485709 PRR29P0C7W0 189 aa14.69□□□□□ -0.06
C1D-207ENST00000485709 EVX2Q03828 476 aa14.69□□□□□ -0.06
C1D-207ENST00000485709 CHADLQ6NUI6 762 aa14.66□□□□□ -0.06
C1D-207ENST00000485709 SPDYE4A6NLX3 237 aa14.6□□□□□ -0.07
C1D-207ENST00000485709 C19orf67A6NJJ6 358 aa14.56□□□□□ -0.08
C1D-207ENST00000485709 FARP1Q9Y4F1 1045 aaPredicted RBP14.44□□□□□ -0.1
C1D-207ENST00000485709 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
C1D-207ENST00000485709 CREBZFQ9NS37 354 aa14.37□□□□□ -0.11
C1D-207ENST00000485709 GABBR2O75899 941 aa14.33□□□□□ -0.12
C1D-207ENST00000485709 CD44P16070 742 aaKnown RBP14.32□□□□□ -0.12
C1D-207ENST00000485709 PROM2Q8N271 834 aa14.27□□□□□ -0.13
C1D-207ENST00000485709 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
C1D-207ENST00000485709 ZRANB1Q9UGI0 708 aa14.14□□□□□ -0.15
C1D-207ENST00000485709 ZNF579Q8NAF0 562 aaKnown RBP14.11□□□□□ -0.15
C1D-207ENST00000485709 LHX8Q68G74 356 aa14.09□□□□□ -0.15
C1D-207ENST00000485709 NPM1P06748 294 aaKnown RBP eCLIP14.07□□□□□ -0.16
C1D-207ENST00000485709 CLCN6P51797 869 aa14.07□□□□□ -0.16
C1D-207ENST00000485709 POTEIP0CG38 1075 aa14.05□□□□□ -0.16
C1D-207ENST00000485709 PAK3O75914 559 aaPredicted RBP14□□□□□ -0.17
C1D-207ENST00000485709 FKBP8Q14318 412 aa13.98□□□□□ -0.17
C1D-207ENST00000485709 PHF12Q96QT6 1004 aa13.97□□□□□ -0.17
C1D-207ENST00000485709 GALR2O43603 387 aaPredicted RBP13.95□□□□□ -0.18
C1D-207ENST00000485709 PLSCR2Q9NRY7 297 aa13.95□□□□□ -0.18
C1D-207ENST00000485709 DCBLD2Q96PD2 775 aa13.93□□□□□ -0.18
C1D-207ENST00000485709 MIER1Q8N108 512 aa13.92□□□□□ -0.18
C1D-207ENST00000485709 TSPYL2Q9H2G4 693 aaPredicted RBP13.85□□□□□ -0.19
C1D-207ENST00000485709 PLEKHG5O94827 1062 aa13.84□□□□□ -0.19
C1D-207ENST00000485709 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
C1D-207ENST00000485709 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms