RNA–Protein interactions for RNA: ENST00000485661.1

NOM1-206, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

TSL 3

Gene NOM1, Length 486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-206ENST00000485661 AEBP2Q6ZN18 517 aaPredicted RBP20.81■□□□□ 0.92
NOM1-206ENST00000485661 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.72
NOM1-206ENST00000485661 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.44
NOM1-206ENST00000485661 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
NOM1-206ENST00000485661 FOXD1Q16676 465 aa16.63■□□□□ 0.25
NOM1-206ENST00000485661 POTEDQ86YR6 584 aa15.74■□□□□ 0.11
NOM1-206ENST00000485661 MSH5O43196 834 aa15.7■□□□□ 0.1
NOM1-206ENST00000485661 PLPPR3Q6T4P5 718 aa15.6■□□□□ 0.09
NOM1-206ENST00000485661 PIAS4Q8N2W9 510 aaPredicted RBP15.5■□□□□ 0.07
NOM1-206ENST00000485661 PPP6R1Q9UPN7 881 aa15.35■□□□□ 0.05
NOM1-206ENST00000485661 ADRA2BP18089 450 aa15.3■□□□□ 0.04
NOM1-206ENST00000485661 MAPK8IP2Q13387 824 aaPredicted RBP14.14□□□□□ -0.15
NOM1-206ENST00000485661 DMRT2Q9Y5R5 561 aa14.08□□□□□ -0.16
NOM1-206ENST00000485661 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
NOM1-206ENST00000485661 PPP4R3CPQ6ZMV5 832 aa13.7□□□□□ -0.22
NOM1-206ENST00000485661 CACNB1Q02641 598 aaPredicted RBP13.66□□□□□ -0.22
NOM1-206ENST00000485661 DCAF8L1A6NGE4 600 aa13.59□□□□□ -0.23
NOM1-206ENST00000485661 HOXD11P31277 338 aaPredicted RBP13.45□□□□□ -0.26
NOM1-206ENST00000485661 CNKSR2Q8WXI2 1034 aa13.41□□□□□ -0.26
NOM1-206ENST00000485661 RNF39Q9H2S5 420 aa13.34□□□□□ -0.27
NOM1-206ENST00000485661 RNF216Q9NWF9 866 aaPredicted RBP13.3□□□□□ -0.28
NOM1-206ENST00000485661 C1QBPQ07021 282 aaKnown RBP13.16□□□□□ -0.3
NOM1-206ENST00000485661 NCBP3Q53F19 620 aaKnown RBP13.16□□□□□ -0.3
NOM1-206ENST00000485661 DNAJC5BQ9UF47 199 aa13.03□□□□□ -0.32
NOM1-206ENST00000485661 NPM3O75607 178 aaKnown RBP12.98□□□□□ -0.33
NOM1-206ENST00000485661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.89□□□□□ -0.35
NOM1-206ENST00000485661 KCNA4P22459 653 aa12.76□□□□□ -0.37
NOM1-206ENST00000485661 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.41
NOM1-206ENST00000485661 CAPN15O75808 1086 aa12.47□□□□□ -0.41
NOM1-206ENST00000485661 SPINK5Q9NQ38 1064 aaPredicted RBP12.43□□□□□ -0.42
NOM1-206ENST00000485661 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
NOM1-206ENST00000485661 DSG3P32926 999 aa12.4□□□□□ -0.42
NOM1-206ENST00000485661 POTEHQ6S545 545 aa12.3□□□□□ -0.44
NOM1-206ENST00000485661 TRHP20396 242 aaPredicted RBP12.21□□□□□ -0.45
NOM1-206ENST00000485661 APLP2Q06481 763 aa12.21□□□□□ -0.45
NOM1-206ENST00000485661 ZNF219Q9P2Y4 722 aaPredicted RBP12.15□□□□□ -0.46
NOM1-206ENST00000485661 ABCB7O75027 752 aa12.14□□□□□ -0.47
NOM1-206ENST00000485661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.13□□□□□ -0.47
NOM1-206ENST00000485661 HNRNPUL2Q1KMD3 747 aaKnown RBP12.13□□□□□ -0.47
NOM1-206ENST00000485661 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
NOM1-206ENST00000485661 SLC4A1APQ9BWU0 796 aaKnown RBP12.05□□□□□ -0.48
NOM1-206ENST00000485661 MYCNP04198 464 aaPredicted RBP11.99□□□□□ -0.49
NOM1-206ENST00000485661 FOXD4L1Q9NU39 408 aa11.89□□□□□ -0.51
NOM1-206ENST00000485661 RBM42Q9BTD8 480 aaKnown RBP11.88□□□□□ -0.51
NOM1-206ENST00000485661 POLA2Q14181 598 aa11.81□□□□□ -0.52
NOM1-206ENST00000485661 ATF5Q9Y2D1 282 aaPredicted RBP11.75□□□□□ -0.53
NOM1-206ENST00000485661 ZBTB22O15209 634 aa11.73□□□□□ -0.53
NOM1-206ENST00000485661 CHRDL2Q6WN34 429 aa11.72□□□□□ -0.53
NOM1-206ENST00000485661 ZBTB12Q9Y330 459 aaPredicted RBP11.55□□□□□ -0.56
NOM1-206ENST00000485661 AKT1S1Q96B36 256 aa11.54□□□□□ -0.56
NOM1-206ENST00000485661 ATXN8OSP0DMR3 200 aa11.48□□□□□ -0.57
NOM1-206ENST00000485661 REM2Q8IYK8 340 aaPredicted RBP11.43□□□□□ -0.58
NOM1-206ENST00000485661 OSCARQ8IYS5 282 aa11.42□□□□□ -0.58
NOM1-206ENST00000485661 SP7Q8TDD2 431 aaPredicted RBP11.41□□□□□ -0.58
NOM1-206ENST00000485661 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
NOM1-206ENST00000485661 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
NOM1-206ENST00000485661 HAX1O00165 279 aa11.29□□□□□ -0.6
NOM1-206ENST00000485661 FBLN2P98095 1184 aa11.26□□□□□ -0.61
NOM1-206ENST00000485661 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.61
NOM1-206ENST00000485661 CSRNP3Q8WYN3 585 aa11.21□□□□□ -0.61
NOM1-206ENST00000485661 MKRN4PQ13434 485 aaPredicted RBP11.2□□□□□ -0.62
NOM1-206ENST00000485661 SPDYE2BA6NHP3 402 aa11.17□□□□□ -0.62
NOM1-206ENST00000485661 SPDYE6P0CI01 402 aa11.17□□□□□ -0.62
NOM1-206ENST00000485661 SPDYE2Q495Y8 402 aa11.17□□□□□ -0.62
NOM1-206ENST00000485661 EHMT2Q96KQ7 1210 aa11.12□□□□□ -0.63
NOM1-206ENST00000485661 ZNF692Q9BU19 519 aaPredicted RBP11.07□□□□□ -0.64
NOM1-206ENST00000485661 EVX2Q03828 476 aa11.06□□□□□ -0.64
NOM1-206ENST00000485661 CLEC11AQ9Y240 323 aa11.06□□□□□ -0.64
NOM1-206ENST00000485661 SPDYE1Q8NFV5 336 aaPredicted RBP11.04□□□□□ -0.64
NOM1-206ENST00000485661 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
NOM1-206ENST00000485661 SSUH2Q9Y2M2 353 aa11.02□□□□□ -0.65
NOM1-206ENST00000485661 PABPN1Q86U42 306 aaKnown RBP eCLIP10.91□□□□□ -0.66
NOM1-206ENST00000485661 C19orf67A6NJJ6 358 aa10.9□□□□□ -0.66
NOM1-206ENST00000485661 CHADLQ6NUI6 762 aa10.84□□□□□ -0.67
NOM1-206ENST00000485661 PRR29P0C7W0 189 aa10.83□□□□□ -0.68
NOM1-206ENST00000485661 GABBR2O75899 941 aa10.82□□□□□ -0.68
NOM1-206ENST00000485661 LHX8Q68G74 356 aa10.72□□□□□ -0.69
NOM1-206ENST00000485661 SPDYE4A6NLX3 237 aa10.68□□□□□ -0.7
NOM1-206ENST00000485661 CD44P16070 742 aaKnown RBP10.66□□□□□ -0.7
NOM1-206ENST00000485661 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
NOM1-206ENST00000485661 CLCN6P51797 869 aa10.58□□□□□ -0.72
NOM1-206ENST00000485661 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
NOM1-206ENST00000485661 POTEIP0CG38 1075 aa10.56□□□□□ -0.72
NOM1-206ENST00000485661 CREBZFQ9NS37 354 aa10.54□□□□□ -0.72
NOM1-206ENST00000485661 DCBLD2Q96PD2 775 aa10.52□□□□□ -0.73
NOM1-206ENST00000485661 ZRANB1Q9UGI0 708 aa10.49□□□□□ -0.73
NOM1-206ENST00000485661 ZNF579Q8NAF0 562 aaKnown RBP10.46□□□□□ -0.73
NOM1-206ENST00000485661 PAK3O75914 559 aaPredicted RBP10.37□□□□□ -0.75
NOM1-206ENST00000485661 PROM2Q8N271 834 aa10.37□□□□□ -0.75
NOM1-206ENST00000485661 GALR2O43603 387 aaPredicted RBP10.36□□□□□ -0.75
NOM1-206ENST00000485661 MNX1P50219 401 aaPredicted RBP10.34□□□□□ -0.75
NOM1-206ENST00000485661 NPM1P06748 294 aaKnown RBP eCLIP10.33□□□□□ -0.76
NOM1-206ENST00000485661 PHF12Q96QT6 1004 aa10.3□□□□□ -0.76
NOM1-206ENST00000485661 PLSCR2Q9NRY7 297 aa10.28□□□□□ -0.76
NOM1-206ENST00000485661 OTUD5Q96G74 571 aa10.24□□□□□ -0.77
NOM1-206ENST00000485661 POTEB2H3BUK9 544 aa10.21□□□□□ -0.77
NOM1-206ENST00000485661 MIER1Q8N108 512 aa10.21□□□□□ -0.77
NOM1-206ENST00000485661 FKBP8Q14318 412 aa10.19□□□□□ -0.78
NOM1-206ENST00000485661 TSPYL2Q9H2G4 693 aaPredicted RBP10.19□□□□□ -0.78
NOM1-206ENST00000485661 PELP1Q8IZL8 1130 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms