RNA–Protein interactions for RNA: ENST00000485497.2

SENP6-209, Transcript of SUMO specific peptidase 6, humanhuman

TSL 4

Gene SENP6, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-209ENST00000485497 AEBP2Q6ZN18 517 aaPredicted RBP29.95■■■□□ 2.39
SENP6-209ENST00000485497 CHIC1Q5VXU3 224 aa28.98■■■□□ 2.23
SENP6-209ENST00000485497 SENP3Q9H4L4 574 aaPredicted RBP25.54■■□□□ 1.68
SENP6-209ENST00000485497 PHF23Q9BUL5 403 aaPredicted RBP25.41■■□□□ 1.66
SENP6-209ENST00000485497 FOXD1Q16676 465 aa23.69■■□□□ 1.38
SENP6-209ENST00000485497 PLPPR3Q6T4P5 718 aa23.41■■□□□ 1.34
SENP6-209ENST00000485497 PPP6R1Q9UPN7 881 aa22.52■■□□□ 1.2
SENP6-209ENST00000485497 ADRA2BP18089 450 aa22.49■■□□□ 1.19
SENP6-209ENST00000485497 PIAS4Q8N2W9 510 aaPredicted RBP22.29■■□□□ 1.16
SENP6-209ENST00000485497 MSH5O43196 834 aa22.03■■□□□ 1.12
SENP6-209ENST00000485497 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
SENP6-209ENST00000485497 POTEDQ86YR6 584 aa20.58■□□□□ 0.89
SENP6-209ENST00000485497 PPP4R3CPQ6ZMV5 832 aa20.56■□□□□ 0.88
SENP6-209ENST00000485497 MAPK8IP2Q13387 824 aaPredicted RBP20.48■□□□□ 0.87
SENP6-209ENST00000485497 DMRT2Q9Y5R5 561 aa20.32■□□□□ 0.84
SENP6-209ENST00000485497 CNKSR2Q8WXI2 1034 aa20.09■□□□□ 0.81
SENP6-209ENST00000485497 NCBP3Q53F19 620 aaKnown RBP19.98■□□□□ 0.79
SENP6-209ENST00000485497 RNF216Q9NWF9 866 aaPredicted RBP19.78■□□□□ 0.76
SENP6-209ENST00000485497 HOXD11P31277 338 aaPredicted RBP19.77■□□□□ 0.76
SENP6-209ENST00000485497 KCNA4P22459 653 aa19.7■□□□□ 0.74
SENP6-209ENST00000485497 NPM3O75607 178 aaKnown RBP19.64■□□□□ 0.73
SENP6-209ENST00000485497 DCAF8L1A6NGE4 600 aa19.44■□□□□ 0.7
SENP6-209ENST00000485497 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
SENP6-209ENST00000485497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.84■□□□□ 0.615e-7■□□□□ 10.6
SENP6-209ENST00000485497 RNF39Q9H2S5 420 aa18.82■□□□□ 0.6
SENP6-209ENST00000485497 SLC4A1APQ9BWU0 796 aaKnown RBP18.73■□□□□ 0.59
SENP6-209ENST00000485497 SLC4A2P04920 1241 aa18.61■□□□□ 0.57
SENP6-209ENST00000485497 C1QBPQ07021 282 aaKnown RBP18.6■□□□□ 0.57
SENP6-209ENST00000485497 CACNB1Q02641 598 aaPredicted RBP18.56■□□□□ 0.56
SENP6-209ENST00000485497 U3KPZ7 1027 aaPredicted RBP18.49■□□□□ 0.55
SENP6-209ENST00000485497 FOXD4L1Q9NU39 408 aa18.26■□□□□ 0.51
SENP6-209ENST00000485497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.2■□□□□ 0.5
SENP6-209ENST00000485497 HNRNPUL2Q1KMD3 747 aaKnown RBP18.2■□□□□ 0.5
SENP6-209ENST00000485497 MYCNP04198 464 aaPredicted RBP18.19■□□□□ 0.5
SENP6-209ENST00000485497 ZBTB22O15209 634 aa18.11■□□□□ 0.49
SENP6-209ENST00000485497 APLP2Q06481 763 aa18.11■□□□□ 0.49
SENP6-209ENST00000485497 SAMD1Q6SPF0 538 aaPredicted RBP18.11■□□□□ 0.49
SENP6-209ENST00000485497 SPINK5Q9NQ38 1064 aaPredicted RBP18.04■□□□□ 0.48
SENP6-209ENST00000485497 CAPN15O75808 1086 aa18.02■□□□□ 0.48
SENP6-209ENST00000485497 ZNF219Q9P2Y4 722 aaPredicted RBP17.88■□□□□ 0.45
SENP6-209ENST00000485497 TRHP20396 242 aaPredicted RBP17.85■□□□□ 0.45
SENP6-209ENST00000485497 EHMT2Q96KQ7 1210 aa17.8■□□□□ 0.44
SENP6-209ENST00000485497 DSG3P32926 999 aa17.78■□□□□ 0.44
SENP6-209ENST00000485497 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
SENP6-209ENST00000485497 ATXN8OSP0DMR3 200 aa17.68■□□□□ 0.42
SENP6-209ENST00000485497 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
SENP6-209ENST00000485497 ABCB7O75027 752 aa17.63■□□□□ 0.41
SENP6-209ENST00000485497 POLA2Q14181 598 aa17.49■□□□□ 0.39
SENP6-209ENST00000485497 ZBTB12Q9Y330 459 aaPredicted RBP17.24■□□□□ 0.35
SENP6-209ENST00000485497 FBLN2P98095 1184 aa17.02■□□□□ 0.32
SENP6-209ENST00000485497 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
SENP6-209ENST00000485497 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
SENP6-209ENST00000485497 MKRN4PQ13434 485 aaPredicted RBP16.89■□□□□ 0.29
SENP6-209ENST00000485497 SPDYE2BA6NHP3 402 aa16.72■□□□□ 0.27
SENP6-209ENST00000485497 SPDYE6P0CI01 402 aa16.72■□□□□ 0.27
SENP6-209ENST00000485497 SPDYE2Q495Y8 402 aa16.72■□□□□ 0.27
SENP6-209ENST00000485497 AKT1S1Q96B36 256 aa16.71■□□□□ 0.27
SENP6-209ENST00000485497 ZNF692Q9BU19 519 aaPredicted RBP16.58■□□□□ 0.24
SENP6-209ENST00000485497 SSUH2Q9Y2M2 353 aa16.54■□□□□ 0.24
SENP6-209ENST00000485497 REM2Q8IYK8 340 aaPredicted RBP16.52■□□□□ 0.24
SENP6-209ENST00000485497 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
SENP6-209ENST00000485497 SPDYE4A6NLX3 237 aa16.39■□□□□ 0.21
SENP6-209ENST00000485497 PITPNM1O00562 1244 aa16.34■□□□□ 0.21
SENP6-209ENST00000485497 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.21
SENP6-209ENST00000485497 SPDYE1Q8NFV5 336 aaPredicted RBP16.3■□□□□ 0.2
SENP6-209ENST00000485497 POTEHQ6S545 545 aa16.24■□□□□ 0.19
SENP6-209ENST00000485497 CLEC11AQ9Y240 323 aa16.21■□□□□ 0.19
SENP6-209ENST00000485497 PIP4P2Q8N4L2 257 aa16.11■□□□□ 0.17
SENP6-209ENST00000485497 FXR2P51116 673 aaKnown RBP eCLIP16.1■□□□□ 0.177e-6■■□□□ 13.4
SENP6-209ENST00000485497 FKBP8Q14318 412 aa16.08■□□□□ 0.16
SENP6-209ENST00000485497 PROM2Q8N271 834 aa16.08■□□□□ 0.16
SENP6-209ENST00000485497 STAG3Q9UJ98 1225 aa16.05■□□□□ 0.16
SENP6-209ENST00000485497 PRR29P0C7W0 189 aa16.04■□□□□ 0.16
SENP6-209ENST00000485497 PRKAR2AP13861 404 aaKnown RBP15.92■□□□□ 0.14
SENP6-209ENST00000485497 CHADLQ6NUI6 762 aa15.83■□□□□ 0.12
SENP6-209ENST00000485497 CREBZFQ9NS37 354 aa15.74■□□□□ 0.11
SENP6-209ENST00000485497 HAX1O00165 279 aa15.68■□□□□ 0.1
SENP6-209ENST00000485497 FARP1Q9Y4F1 1045 aaPredicted RBP15.68■□□□□ 0.1
SENP6-209ENST00000485497 FBXO3Q9UK99 471 aa15.65■□□□□ 0.1
SENP6-209ENST00000485497 C19orf67A6NJJ6 358 aa15.57■□□□□ 0.08
SENP6-209ENST00000485497 PLEKHG5O94827 1062 aa15.57■□□□□ 0.08
SENP6-209ENST00000485497 MIER1Q8N108 512 aa15.57■□□□□ 0.08
SENP6-209ENST00000485497 MNX1P50219 401 aaPredicted RBP15.54■□□□□ 0.08
SENP6-209ENST00000485497 PLCD3Q8N3E9 789 aa15.52■□□□□ 0.08
SENP6-209ENST00000485497 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
SENP6-209ENST00000485497 SP7Q8TDD2 431 aaPredicted RBP15.48■□□□□ 0.07
SENP6-209ENST00000485497 EVX2Q03828 476 aa15.47■□□□□ 0.07
SENP6-209ENST00000485497 CD44P16070 742 aaKnown RBP15.46■□□□□ 0.07
SENP6-209ENST00000485497 ZBTB47Q9UFB7 747 aaPredicted RBP15.42■□□□□ 0.06
SENP6-209ENST00000485497 VASPP50552 380 aaPredicted RBP15.41■□□□□ 0.06
SENP6-209ENST00000485497 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
SENP6-209ENST00000485497 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
SENP6-209ENST00000485497 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
SENP6-209ENST00000485497 KLHL34Q8N239 644 aa15.22■□□□□ 0.03
SENP6-209ENST00000485497 CLCN6P51797 869 aa15.21■□□□□ 0.03
SENP6-209ENST00000485497 RASEFQ8IZ41 740 aa15.21■□□□□ 0.03
SENP6-209ENST00000485497 GABBR2O75899 941 aa15.2■□□□□ 0.02
SENP6-209ENST00000485497 TSPYL2Q9H2G4 693 aaPredicted RBP15.2■□□□□ 0.02
SENP6-209ENST00000485497 NUBP1P53384 320 aa15.19■□□□□ 0.02
SENP6-209ENST00000485497 IFNLR1Q8IU57 520 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms