RNA–Protein interactions for RNA: ENST00000485374.5

U2SURP-210, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 4

Gene U2SURP, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-210ENST00000485374 AEBP2Q6ZN18 517 aaPredicted RBP23.8■■□□□ 1.4
U2SURP-210ENST00000485374 CHIC1Q5VXU3 224 aa22.53■■□□□ 1.2
U2SURP-210ENST00000485374 SENP3Q9H4L4 574 aaPredicted RBP20.24■□□□□ 0.83
U2SURP-210ENST00000485374 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
U2SURP-210ENST00000485374 FOXD1Q16676 465 aa18.91■□□□□ 0.62
U2SURP-210ENST00000485374 PLPPR3Q6T4P5 718 aa17.96■□□□□ 0.47
U2SURP-210ENST00000485374 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
U2SURP-210ENST00000485374 MSH5O43196 834 aa17.65■□□□□ 0.42
U2SURP-210ENST00000485374 PIAS4Q8N2W9 510 aaPredicted RBP17.65■□□□□ 0.42
U2SURP-210ENST00000485374 ADRA2BP18089 450 aa17.62■□□□□ 0.41
U2SURP-210ENST00000485374 POTEDQ86YR6 584 aa17.33■□□□□ 0.36
U2SURP-210ENST00000485374 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
U2SURP-210ENST00000485374 DMRT2Q9Y5R5 561 aa16.06■□□□□ 0.16
U2SURP-210ENST00000485374 SCAF1Q9H7N4 1312 aaKnown RBP16.03■□□□□ 0.16
U2SURP-210ENST00000485374 PPP4R3CPQ6ZMV5 832 aa15.79■□□□□ 0.12
U2SURP-210ENST00000485374 KCNA4P22459 653 aa15.7■□□□□ 0.1
U2SURP-210ENST00000485374 NCBP3Q53F19 620 aaKnown RBP15.49■□□□□ 0.07
U2SURP-210ENST00000485374 HOXD11P31277 338 aaPredicted RBP15.46■□□□□ 0.07
U2SURP-210ENST00000485374 CNKSR2Q8WXI2 1034 aa15.45■□□□□ 0.06
U2SURP-210ENST00000485374 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
U2SURP-210ENST00000485374 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
U2SURP-210ENST00000485374 NPM3O75607 178 aaKnown RBP15.22■□□□□ 0.03
U2SURP-210ENST00000485374 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
U2SURP-210ENST00000485374 RNF39Q9H2S5 420 aa15.1■□□□□ 0.01
U2SURP-210ENST00000485374 SLC4A1APQ9BWU0 796 aaKnown RBP15.02■□□□□ -0
U2SURP-210ENST00000485374 DNAJC5BQ9UF47 199 aa14.88□□□□□ -0.03
U2SURP-210ENST00000485374 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
U2SURP-210ENST00000485374 C1QBPQ07021 282 aaKnown RBP14.84□□□□□ -0.03
U2SURP-210ENST00000485374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.051e-7■■■□□ 16
U2SURP-210ENST00000485374 CSRNP3Q8WYN3 585 aa14.59□□□□□ -0.07
U2SURP-210ENST00000485374 ZBTB22O15209 634 aa14.44□□□□□ -0.1
U2SURP-210ENST00000485374 U3KPZ7 1027 aaPredicted RBP14.44□□□□□ -0.1
U2SURP-210ENST00000485374 FOXD4L1Q9NU39 408 aa14.4□□□□□ -0.1
U2SURP-210ENST00000485374 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
U2SURP-210ENST00000485374 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
U2SURP-210ENST00000485374 CAPN15O75808 1086 aa14.19□□□□□ -0.14
U2SURP-210ENST00000485374 DSG3P32926 999 aa14.13□□□□□ -0.15
U2SURP-210ENST00000485374 MYCNP04198 464 aaPredicted RBP14.07□□□□□ -0.16
U2SURP-210ENST00000485374 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
U2SURP-210ENST00000485374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.94□□□□□ -0.18
U2SURP-210ENST00000485374 APLP2Q06481 763 aa13.94□□□□□ -0.18
U2SURP-210ENST00000485374 HNRNPUL2Q1KMD3 747 aaKnown RBP13.94□□□□□ -0.18
U2SURP-210ENST00000485374 ATXN8OSP0DMR3 200 aa13.91□□□□□ -0.18
U2SURP-210ENST00000485374 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
U2SURP-210ENST00000485374 ABCB7O75027 752 aa13.89□□□□□ -0.19
U2SURP-210ENST00000485374 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
U2SURP-210ENST00000485374 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
U2SURP-210ENST00000485374 POLA2Q14181 598 aa13.58□□□□□ -0.24
U2SURP-210ENST00000485374 POTEHQ6S545 545 aa13.56□□□□□ -0.24
U2SURP-210ENST00000485374 RBM42Q9BTD8 480 aaKnown RBP13.43□□□□□ -0.26
U2SURP-210ENST00000485374 ZBTB12Q9Y330 459 aaPredicted RBP13.25□□□□□ -0.29
U2SURP-210ENST00000485374 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
U2SURP-210ENST00000485374 FKBP8Q14318 412 aa13.17□□□□□ -0.3
U2SURP-210ENST00000485374 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
U2SURP-210ENST00000485374 AKT1S1Q96B36 256 aa13.14□□□□□ -0.31
U2SURP-210ENST00000485374 FBLN2P98095 1184 aa13.1□□□□□ -0.31
U2SURP-210ENST00000485374 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.32
U2SURP-210ENST00000485374 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
U2SURP-210ENST00000485374 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
U2SURP-210ENST00000485374 PITPNM1O00562 1244 aa12.91□□□□□ -0.34
U2SURP-210ENST00000485374 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
U2SURP-210ENST00000485374 SPDYE2BA6NHP3 402 aa12.87□□□□□ -0.35
U2SURP-210ENST00000485374 SPDYE6P0CI01 402 aa12.87□□□□□ -0.35
U2SURP-210ENST00000485374 SPDYE2Q495Y8 402 aa12.87□□□□□ -0.35
U2SURP-210ENST00000485374 FXR2P51116 673 aaKnown RBP eCLIP12.79□□□□□ -0.361e-6■■■■□ 22.8
U2SURP-210ENST00000485374 PROM2Q8N271 834 aa12.77□□□□□ -0.37
U2SURP-210ENST00000485374 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
U2SURP-210ENST00000485374 SSUH2Q9Y2M2 353 aa12.72□□□□□ -0.37
U2SURP-210ENST00000485374 SP7Q8TDD2 431 aaPredicted RBP12.69□□□□□ -0.38
U2SURP-210ENST00000485374 FBXO3Q9UK99 471 aa12.69□□□□□ -0.38
U2SURP-210ENST00000485374 CLEC11AQ9Y240 323 aa12.66□□□□□ -0.38
U2SURP-210ENST00000485374 HAX1O00165 279 aa12.64□□□□□ -0.39
U2SURP-210ENST00000485374 SPDYE1Q8NFV5 336 aaPredicted RBP12.64□□□□□ -0.39
U2SURP-210ENST00000485374 PRKAR2AP13861 404 aaKnown RBP12.57□□□□□ -0.4
U2SURP-210ENST00000485374 PABPN1Q86U42 306 aaKnown RBP eCLIP12.55□□□□□ -0.4
U2SURP-210ENST00000485374 EVX2Q03828 476 aa12.53□□□□□ -0.4
U2SURP-210ENST00000485374 AMER1Q5JTC6 1135 aaPredicted RBP12.49□□□□□ -0.41
U2SURP-210ENST00000485374 VASPP50552 380 aaPredicted RBP12.47□□□□□ -0.41
U2SURP-210ENST00000485374 CHADLQ6NUI6 762 aa12.45□□□□□ -0.42
U2SURP-210ENST00000485374 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
U2SURP-210ENST00000485374 PRR29P0C7W0 189 aa12.42□□□□□ -0.42
U2SURP-210ENST00000485374 RTN4Q9NQC3 1192 aaKnown RBP12.42□□□□□ -0.42
U2SURP-210ENST00000485374 C19orf67A6NJJ6 358 aa12.38□□□□□ -0.43
U2SURP-210ENST00000485374 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
U2SURP-210ENST00000485374 PLCD3Q8N3E9 789 aa12.25□□□□□ -0.45
U2SURP-210ENST00000485374 MIER1Q8N108 512 aa12.24□□□□□ -0.45
U2SURP-210ENST00000485374 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
U2SURP-210ENST00000485374 GABBR2O75899 941 aa12.21□□□□□ -0.45
U2SURP-210ENST00000485374 KLHL34Q8N239 644 aa12.2□□□□□ -0.46
U2SURP-210ENST00000485374 PLEKHG5O94827 1062 aa12.17□□□□□ -0.46
U2SURP-210ENST00000485374 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
U2SURP-210ENST00000485374 SPOCK2Q92563 424 aa12.14□□□□□ -0.47
U2SURP-210ENST00000485374 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
U2SURP-210ENST00000485374 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
U2SURP-210ENST00000485374 PKD2Q13563 968 aa12□□□□□ -0.49
U2SURP-210ENST00000485374 POTEIP0CG38 1075 aa11.98□□□□□ -0.49
U2SURP-210ENST00000485374 ZRANB1Q9UGI0 708 aa11.98□□□□□ -0.49
U2SURP-210ENST00000485374 ZNF579Q8NAF0 562 aaKnown RBP11.97□□□□□ -0.49
U2SURP-210ENST00000485374 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
U2SURP-210ENST00000485374 CLCN6P51797 869 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms