RNA–Protein interactions for RNA: ENST00000485219.1

C3orf38-203, Transcript of chromosome 3 open reading frame 38, humanhuman

TSL 3

Gene C3orf38, Length 433 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf38-203ENST00000485219 AEBP2Q6ZN18 517 aaPredicted RBP27.71■■■□□ 2.03
C3orf38-203ENST00000485219 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
C3orf38-203ENST00000485219 PHF23Q9BUL5 403 aaPredicted RBP24.01■■□□□ 1.43
C3orf38-203ENST00000485219 SENP3Q9H4L4 574 aaPredicted RBP23.49■■□□□ 1.35
C3orf38-203ENST00000485219 PLPPR3Q6T4P5 718 aa22.25■■□□□ 1.15
C3orf38-203ENST00000485219 FOXD1Q16676 465 aa21.77■■□□□ 1.08
C3orf38-203ENST00000485219 ADRA2BP18089 450 aa21.11■□□□□ 0.97
C3orf38-203ENST00000485219 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
C3orf38-203ENST00000485219 PIAS4Q8N2W9 510 aaPredicted RBP20.59■□□□□ 0.89
C3orf38-203ENST00000485219 MSH5O43196 834 aa19.99■□□□□ 0.79
C3orf38-203ENST00000485219 PPP4R3CPQ6ZMV5 832 aa19.63■□□□□ 0.73
C3orf38-203ENST00000485219 KCNA4P22459 653 aa19.42■□□□□ 0.7
C3orf38-203ENST00000485219 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
C3orf38-203ENST00000485219 NCBP3Q53F19 620 aaKnown RBP19.18■□□□□ 0.66
C3orf38-203ENST00000485219 MAPK8IP2Q13387 824 aaPredicted RBP19.08■□□□□ 0.64
C3orf38-203ENST00000485219 CNKSR2Q8WXI2 1034 aa19.03■□□□□ 0.64
C3orf38-203ENST00000485219 NPM3O75607 178 aaKnown RBP18.9■□□□□ 0.62
C3orf38-203ENST00000485219 DMRT2Q9Y5R5 561 aa18.79■□□□□ 0.6
C3orf38-203ENST00000485219 RNF216Q9NWF9 866 aaPredicted RBP18.61■□□□□ 0.57
C3orf38-203ENST00000485219 SLC4A1APQ9BWU0 796 aaKnown RBP18.54■□□□□ 0.56
C3orf38-203ENST00000485219 HOXD11P31277 338 aaPredicted RBP18.48■□□□□ 0.55
C3orf38-203ENST00000485219 DNAJC5BQ9UF47 199 aa18.33■□□□□ 0.52
C3orf38-203ENST00000485219 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
C3orf38-203ENST00000485219 DCAF8L1A6NGE4 600 aa17.95■□□□□ 0.46
C3orf38-203ENST00000485219 CSRNP3Q8WYN3 585 aa17.94■□□□□ 0.46
C3orf38-203ENST00000485219 ZBTB22O15209 634 aa17.88■□□□□ 0.45
C3orf38-203ENST00000485219 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
C3orf38-203ENST00000485219 FOXD4L1Q9NU39 408 aa17.81■□□□□ 0.44
C3orf38-203ENST00000485219 SLC4A2P04920 1241 aa17.8■□□□□ 0.44
C3orf38-203ENST00000485219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.61■□□□□ 0.41
C3orf38-203ENST00000485219 MYCNP04198 464 aaPredicted RBP17.46■□□□□ 0.39
C3orf38-203ENST00000485219 U3KPZ7 1027 aaPredicted RBP17.35■□□□□ 0.37
C3orf38-203ENST00000485219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
C3orf38-203ENST00000485219 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
C3orf38-203ENST00000485219 ATXN8OSP0DMR3 200 aa17.18■□□□□ 0.34
C3orf38-203ENST00000485219 RNF39Q9H2S5 420 aa17.16■□□□□ 0.34
C3orf38-203ENST00000485219 SAMD1Q6SPF0 538 aaPredicted RBP17.15■□□□□ 0.34
C3orf38-203ENST00000485219 APLP2Q06481 763 aa16.98■□□□□ 0.31
C3orf38-203ENST00000485219 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
C3orf38-203ENST00000485219 C1QBPQ07021 282 aaKnown RBP16.96■□□□□ 0.31
C3orf38-203ENST00000485219 SPINK5Q9NQ38 1064 aaPredicted RBP16.8■□□□□ 0.28
C3orf38-203ENST00000485219 CAPN15O75808 1086 aa16.72■□□□□ 0.27
C3orf38-203ENST00000485219 ZNF219Q9P2Y4 722 aaPredicted RBP16.7■□□□□ 0.26
C3orf38-203ENST00000485219 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
C3orf38-203ENST00000485219 CACNB1Q02641 598 aaPredicted RBP16.55■□□□□ 0.24
C3orf38-203ENST00000485219 POLA2Q14181 598 aa16.47■□□□□ 0.23
C3orf38-203ENST00000485219 ABCB7O75027 752 aa16.43■□□□□ 0.22
C3orf38-203ENST00000485219 DSG3P32926 999 aa16.39■□□□□ 0.21
C3orf38-203ENST00000485219 MKRN4PQ13434 485 aaPredicted RBP16.26■□□□□ 0.19
C3orf38-203ENST00000485219 FBLN2P98095 1184 aa16.25■□□□□ 0.19
C3orf38-203ENST00000485219 ZBTB12Q9Y330 459 aaPredicted RBP16.23■□□□□ 0.19
C3orf38-203ENST00000485219 FKBP8Q14318 412 aa16.21■□□□□ 0.19
C3orf38-203ENST00000485219 SPDYE4A6NLX3 237 aa15.99■□□□□ 0.15
C3orf38-203ENST00000485219 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
C3orf38-203ENST00000485219 SPDYE2BA6NHP3 402 aa15.81■□□□□ 0.12
C3orf38-203ENST00000485219 SPDYE6P0CI01 402 aa15.81■□□□□ 0.12
C3orf38-203ENST00000485219 SPDYE2Q495Y8 402 aa15.81■□□□□ 0.12
C3orf38-203ENST00000485219 PROM2Q8N271 834 aa15.77■□□□□ 0.12
C3orf38-203ENST00000485219 ZNF692Q9BU19 519 aaPredicted RBP15.77■□□□□ 0.12
C3orf38-203ENST00000485219 SSUH2Q9Y2M2 353 aa15.72■□□□□ 0.11
C3orf38-203ENST00000485219 RBM42Q9BTD8 480 aaKnown RBP15.63■□□□□ 0.09
C3orf38-203ENST00000485219 FBXO3Q9UK99 471 aa15.58■□□□□ 0.08
C3orf38-203ENST00000485219 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
C3orf38-203ENST00000485219 AKT1S1Q96B36 256 aa15.47■□□□□ 0.07
C3orf38-203ENST00000485219 VASPP50552 380 aaPredicted RBP15.37■□□□□ 0.05
C3orf38-203ENST00000485219 STAG3Q9UJ98 1225 aa15.36■□□□□ 0.05
C3orf38-203ENST00000485219 REM2Q8IYK8 340 aaPredicted RBP15.32■□□□□ 0.04
C3orf38-203ENST00000485219 SPDYE1Q8NFV5 336 aaPredicted RBP15.29■□□□□ 0.04
C3orf38-203ENST00000485219 CLEC11AQ9Y240 323 aa15.2■□□□□ 0.02
C3orf38-203ENST00000485219 IFNLR1Q8IU57 520 aaPredicted RBP15.16■□□□□ 0.02
C3orf38-203ENST00000485219 PITPNM1O00562 1244 aa15.15■□□□□ 0.02
C3orf38-203ENST00000485219 AMER1Q5JTC6 1135 aaPredicted RBP15.15■□□□□ 0.02
C3orf38-203ENST00000485219 PLCD3Q8N3E9 789 aa15.14■□□□□ 0.01
C3orf38-203ENST00000485219 MIER1Q8N108 512 aa15.13■□□□□ 0.01
C3orf38-203ENST00000485219 RTN4Q9NQC3 1192 aaKnown RBP15.12■□□□□ 0.01
C3orf38-203ENST00000485219 PRR29P0C7W0 189 aa15.09■□□□□ 0.01
C3orf38-203ENST00000485219 PLEKHG5O94827 1062 aa15.04■□□□□ -0
C3orf38-203ENST00000485219 KLHL34Q8N239 644 aa15.04■□□□□ -0
C3orf38-203ENST00000485219 ZBTB47Q9UFB7 747 aaPredicted RBP14.96□□□□□ -0.01
C3orf38-203ENST00000485219 SPOCK2Q92563 424 aa14.95□□□□□ -0.02
C3orf38-203ENST00000485219 CREBZFQ9NS37 354 aa14.95□□□□□ -0.02
C3orf38-203ENST00000485219 CHRDL2Q6WN34 429 aa14.89□□□□□ -0.03
C3orf38-203ENST00000485219 MNX1P50219 401 aaPredicted RBP14.83□□□□□ -0.04
C3orf38-203ENST00000485219 FXR2P51116 673 aaKnown RBP eCLIP14.81□□□□□ -0.04
C3orf38-203ENST00000485219 CHADLQ6NUI6 762 aa14.81□□□□□ -0.04
C3orf38-203ENST00000485219 PRKAR2AP13861 404 aaKnown RBP14.77□□□□□ -0.05
C3orf38-203ENST00000485219 PKD2Q13563 968 aa14.74□□□□□ -0.05
C3orf38-203ENST00000485219 PIP4P2Q8N4L2 257 aa14.74□□□□□ -0.05
C3orf38-203ENST00000485219 NUBP1P53384 320 aa14.73□□□□□ -0.05
C3orf38-203ENST00000485219 NPM1P06748 294 aaKnown RBP eCLIP14.71□□□□□ -0.05
C3orf38-203ENST00000485219 FARP1Q9Y4F1 1045 aaPredicted RBP14.7□□□□□ -0.06
C3orf38-203ENST00000485219 CIZ1Q9ULV3 898 aaPredicted RBP14.68□□□□□ -0.06
C3orf38-203ENST00000485219 GSE1Q14687 1217 aa14.62□□□□□ -0.07
C3orf38-203ENST00000485219 RASEFQ8IZ41 740 aa14.62□□□□□ -0.07
C3orf38-203ENST00000485219 ECM2O94769 699 aaPredicted RBP14.61□□□□□ -0.07
C3orf38-203ENST00000485219 FAM212AQ96EL1 285 aa14.61□□□□□ -0.07
C3orf38-203ENST00000485219 DCAF8Q5TAQ9 597 aa14.6□□□□□ -0.07
C3orf38-203ENST00000485219 TRIM41Q8WV44 630 aa14.56□□□□□ -0.08
C3orf38-203ENST00000485219 TSPYL2Q9H2G4 693 aaPredicted RBP14.48□□□□□ -0.09
C3orf38-203ENST00000485219 RGL2O15211 777 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms