RNA–Protein interactions for RNA: ENST00000485215.5

PTPRG-206, Transcript of protein tyrosine phosphatase, receptor type G, humanhuman

TSL 3

Gene PTPRG, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Dendrite, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRG-206ENST00000485215 AEBP2Q6ZN18 517 aaPredicted RBP37.86■■■■□ 3.65
PTPRG-206ENST00000485215 CHIC1Q5VXU3 224 aa35.81■■■■□ 3.32
PTPRG-206ENST00000485215 SENP3Q9H4L4 574 aaPredicted RBP32.39■■■□□ 2.78
PTPRG-206ENST00000485215 PHF23Q9BUL5 403 aaPredicted RBP31.93■■■□□ 2.7
PTPRG-206ENST00000485215 FOXD1Q16676 465 aa30.18■■■□□ 2.42
PTPRG-206ENST00000485215 PLPPR3Q6T4P5 718 aa28.54■■■□□ 2.16
PTPRG-206ENST00000485215 MSH5O43196 834 aa28.37■■■□□ 2.13
PTPRG-206ENST00000485215 PIAS4Q8N2W9 510 aaPredicted RBP28.15■■■□□ 2.1
PTPRG-206ENST00000485215 PPP6R1Q9UPN7 881 aa28.05■■■□□ 2.08
PTPRG-206ENST00000485215 POTEDQ86YR6 584 aa27.97■■■□□ 2.07
PTPRG-206ENST00000485215 ADRA2BP18089 450 aa27.94■■■□□ 2.06
PTPRG-206ENST00000485215 MAPK8IP2Q13387 824 aaPredicted RBP25.72■■□□□ 1.71
PTPRG-206ENST00000485215 SCAF1Q9H7N4 1312 aaKnown RBP25.66■■□□□ 1.7
PTPRG-206ENST00000485215 DMRT2Q9Y5R5 561 aa25.65■■□□□ 1.7
PTPRG-206ENST00000485215 PPP4R3CPQ6ZMV5 832 aa24.97■■□□□ 1.59
PTPRG-206ENST00000485215 HOXD11P31277 338 aaPredicted RBP24.63■■□□□ 1.53
PTPRG-206ENST00000485215 DCAF8L1A6NGE4 600 aa24.57■■□□□ 1.52
PTPRG-206ENST00000485215 CNKSR2Q8WXI2 1034 aa24.57■■□□□ 1.52
PTPRG-206ENST00000485215 CACNB1Q02641 598 aaPredicted RBP24.44■■□□□ 1.5
PTPRG-206ENST00000485215 RNF216Q9NWF9 866 aaPredicted RBP24.41■■□□□ 1.5
PTPRG-206ENST00000485215 RNF39Q9H2S5 420 aa24.16■■□□□ 1.46
PTPRG-206ENST00000485215 NCBP3Q53F19 620 aaKnown RBP24■■□□□ 1.43
PTPRG-206ENST00000485215 DNAJC5BQ9UF47 199 aa23.88■■□□□ 1.41
PTPRG-206ENST00000485215 C1QBPQ07021 282 aaKnown RBP23.83■■□□□ 1.41
PTPRG-206ENST00000485215 NPM3O75607 178 aaKnown RBP23.59■■□□□ 1.37
PTPRG-206ENST00000485215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.46■■□□□ 1.35
PTPRG-206ENST00000485215 KCNA4P22459 653 aa22.94■■□□□ 1.26
PTPRG-206ENST00000485215 U3KPZ7 1027 aaPredicted RBP22.92■■□□□ 1.26
PTPRG-206ENST00000485215 CAPN15O75808 1086 aa22.63■■□□□ 1.21
PTPRG-206ENST00000485215 SPINK5Q9NQ38 1064 aaPredicted RBP22.63■■□□□ 1.21
PTPRG-206ENST00000485215 SLC4A2P04920 1241 aa22.57■■□□□ 1.2
PTPRG-206ENST00000485215 DSG3P32926 999 aa22.55■■□□□ 1.2
PTPRG-206ENST00000485215 APLP2Q06481 763 aa22.35■■□□□ 1.17
PTPRG-206ENST00000485215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
PTPRG-206ENST00000485215 HNRNPUL2Q1KMD3 747 aaKnown RBP22.28■■□□□ 1.16
PTPRG-206ENST00000485215 TRHP20396 242 aaPredicted RBP22.21■■□□□ 1.15
PTPRG-206ENST00000485215 ZNF219Q9P2Y4 722 aaPredicted RBP22.21■■□□□ 1.15
PTPRG-206ENST00000485215 SAMD1Q6SPF0 538 aaPredicted RBP22.12■■□□□ 1.13
PTPRG-206ENST00000485215 ABCB7O75027 752 aa22.05■■□□□ 1.12
PTPRG-206ENST00000485215 POTEHQ6S545 545 aa21.9■■□□□ 1.1
PTPRG-206ENST00000485215 MYCNP04198 464 aaPredicted RBP21.85■■□□□ 1.09
PTPRG-206ENST00000485215 SLC4A1APQ9BWU0 796 aaKnown RBP21.64■■□□□ 1.05
PTPRG-206ENST00000485215 POLA2Q14181 598 aa21.59■■□□□ 1.05
PTPRG-206ENST00000485215 RBM42Q9BTD8 480 aaKnown RBP21.57■■□□□ 1.04
PTPRG-206ENST00000485215 FOXD4L1Q9NU39 408 aa21.5■■□□□ 1.03
PTPRG-206ENST00000485215 ATF5Q9Y2D1 282 aaPredicted RBP21.3■■□□□ 1
PTPRG-206ENST00000485215 ZBTB12Q9Y330 459 aaPredicted RBP21.19■□□□□ 0.98
PTPRG-206ENST00000485215 CHRDL2Q6WN34 429 aa21.14■□□□□ 0.97
PTPRG-206ENST00000485215 ZBTB22O15209 634 aa21.06■□□□□ 0.96
PTPRG-206ENST00000485215 AKT1S1Q96B36 256 aa21.02■□□□□ 0.96
PTPRG-206ENST00000485215 ATXN8OSP0DMR3 200 aa20.91■□□□□ 0.94
PTPRG-206ENST00000485215 OSCARQ8IYS5 282 aa20.86■□□□□ 0.93
PTPRG-206ENST00000485215 REM2Q8IYK8 340 aaPredicted RBP20.8■□□□□ 0.92
PTPRG-206ENST00000485215 PIP4P2Q8N4L2 257 aa20.58■□□□□ 0.89
PTPRG-206ENST00000485215 PITPNM1O00562 1244 aa20.56■□□□□ 0.88
PTPRG-206ENST00000485215 FBLN2P98095 1184 aa20.56■□□□□ 0.88
PTPRG-206ENST00000485215 SPDYE2BA6NHP3 402 aa20.5■□□□□ 0.87
PTPRG-206ENST00000485215 SPDYE6P0CI01 402 aa20.5■□□□□ 0.87
PTPRG-206ENST00000485215 SPDYE2Q495Y8 402 aa20.5■□□□□ 0.87
PTPRG-206ENST00000485215 FXR2P51116 673 aaKnown RBP eCLIP20.45■□□□□ 0.86
PTPRG-206ENST00000485215 SP7Q8TDD2 431 aaPredicted RBP20.44■□□□□ 0.86
PTPRG-206ENST00000485215 MKRN4PQ13434 485 aaPredicted RBP20.33■□□□□ 0.85
PTPRG-206ENST00000485215 HAX1O00165 279 aa20.28■□□□□ 0.84
PTPRG-206ENST00000485215 ZNF692Q9BU19 519 aaPredicted RBP20.2■□□□□ 0.82
PTPRG-206ENST00000485215 SPDYE1Q8NFV5 336 aaPredicted RBP20.19■□□□□ 0.82
PTPRG-206ENST00000485215 SSUH2Q9Y2M2 353 aa20.18■□□□□ 0.82
PTPRG-206ENST00000485215 CLEC11AQ9Y240 323 aa20.13■□□□□ 0.81
PTPRG-206ENST00000485215 PRKAR2AP13861 404 aaKnown RBP20.04■□□□□ 0.8
PTPRG-206ENST00000485215 EVX2Q03828 476 aa19.97■□□□□ 0.79
PTPRG-206ENST00000485215 CSRNP3Q8WYN3 585 aa19.95■□□□□ 0.78
PTPRG-206ENST00000485215 PABPN1Q86U42 306 aaKnown RBP eCLIP19.88■□□□□ 0.77
PTPRG-206ENST00000485215 C19orf67A6NJJ6 358 aa19.8■□□□□ 0.76
PTPRG-206ENST00000485215 PRR29P0C7W0 189 aa19.8■□□□□ 0.76
PTPRG-206ENST00000485215 CHADLQ6NUI6 762 aa19.73■□□□□ 0.75
PTPRG-206ENST00000485215 GABBR2O75899 941 aa19.54■□□□□ 0.72
PTPRG-206ENST00000485215 EHMT2Q96KQ7 1210 aa19.54■□□□□ 0.72
PTPRG-206ENST00000485215 FARP1Q9Y4F1 1045 aaPredicted RBP19.47■□□□□ 0.71
PTPRG-206ENST00000485215 CD44P16070 742 aaKnown RBP19.39■□□□□ 0.69
PTPRG-206ENST00000485215 STAG3Q9UJ98 1225 aa19.35■□□□□ 0.69
PTPRG-206ENST00000485215 SPDYE4A6NLX3 237 aa19.3■□□□□ 0.68
PTPRG-206ENST00000485215 CLCN6P51797 869 aa19.27■□□□□ 0.68
PTPRG-206ENST00000485215 CREBZFQ9NS37 354 aa19.23■□□□□ 0.67
PTPRG-206ENST00000485215 LHX8Q68G74 356 aa19.17■□□□□ 0.66
PTPRG-206ENST00000485215 POTEIP0CG38 1075 aa19.1■□□□□ 0.65
PTPRG-206ENST00000485215 ZNF579Q8NAF0 562 aaKnown RBP19.1■□□□□ 0.65
PTPRG-206ENST00000485215 ZRANB1Q9UGI0 708 aa19.09■□□□□ 0.65
PTPRG-206ENST00000485215 DCBLD2Q96PD2 775 aa19■□□□□ 0.63
PTPRG-206ENST00000485215 PAK3O75914 559 aaPredicted RBP18.93■□□□□ 0.62
PTPRG-206ENST00000485215 NPM1P06748 294 aaKnown RBP eCLIP18.92■□□□□ 0.62
PTPRG-206ENST00000485215 MNX1P50219 401 aaPredicted RBP18.87■□□□□ 0.61
PTPRG-206ENST00000485215 GALR2O43603 387 aaPredicted RBP18.84■□□□□ 0.61
PTPRG-206ENST00000485215 PROM2Q8N271 834 aa18.81■□□□□ 0.6
PTPRG-206ENST00000485215 PHF12Q96QT6 1004 aa18.77■□□□□ 0.6
PTPRG-206ENST00000485215 MS4A3Q96HJ5 214 aa18.53■□□□□ 0.56
PTPRG-206ENST00000485215 TSPYL2Q9H2G4 693 aaPredicted RBP18.52■□□□□ 0.56
PTPRG-206ENST00000485215 PLEKHG5O94827 1062 aa18.49■□□□□ 0.55
PTPRG-206ENST00000485215 PELP1Q8IZL8 1130 aaKnown RBP18.49■□□□□ 0.55
PTPRG-206ENST00000485215 POTEB2H3BUK9 544 aa18.47■□□□□ 0.55
PTPRG-206ENST00000485215 ASTLQ6HA08 431 aaPredicted RBP18.47■□□□□ 0.55
PTPRG-206ENST00000485215 OTUD5Q96G74 571 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms