RNA–Protein interactions for RNA: ENST00000485090.1

RABGAP1-211, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 331 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-211ENST00000485090 AEBP2Q6ZN18 517 aaPredicted RBP24.24■■□□□ 1.47
RABGAP1-211ENST00000485090 CHIC1Q5VXU3 224 aa22.76■■□□□ 1.23
RABGAP1-211ENST00000485090 SENP3Q9H4L4 574 aaPredicted RBP20.87■□□□□ 0.93
RABGAP1-211ENST00000485090 PHF23Q9BUL5 403 aaPredicted RBP20.48■□□□□ 0.87
RABGAP1-211ENST00000485090 FOXD1Q16676 465 aa19.48■□□□□ 0.71
RABGAP1-211ENST00000485090 POTEDQ86YR6 584 aa19.13■□□□□ 0.65
RABGAP1-211ENST00000485090 MSH5O43196 834 aa18.54■□□□□ 0.56
RABGAP1-211ENST00000485090 PIAS4Q8N2W9 510 aaPredicted RBP18.11■□□□□ 0.49
RABGAP1-211ENST00000485090 PLPPR3Q6T4P5 718 aa17.7■□□□□ 0.42
RABGAP1-211ENST00000485090 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
RABGAP1-211ENST00000485090 ADRA2BP18089 450 aa17.64■□□□□ 0.41
RABGAP1-211ENST00000485090 DMRT2Q9Y5R5 561 aa16.42■□□□□ 0.22
RABGAP1-211ENST00000485090 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
RABGAP1-211ENST00000485090 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
RABGAP1-211ENST00000485090 SCAF1Q9H7N4 1312 aaKnown RBP16.23■□□□□ 0.19
RABGAP1-211ENST00000485090 DCAF8L1A6NGE4 600 aa15.88■□□□□ 0.13
RABGAP1-211ENST00000485090 RNF39Q9H2S5 420 aa15.71■□□□□ 0.11
RABGAP1-211ENST00000485090 HOXD11P31277 338 aaPredicted RBP15.55■□□□□ 0.08
RABGAP1-211ENST00000485090 C1QBPQ07021 282 aaKnown RBP15.49■□□□□ 0.07
RABGAP1-211ENST00000485090 PPP4R3CPQ6ZMV5 832 aa15.41■□□□□ 0.06
RABGAP1-211ENST00000485090 RNF216Q9NWF9 866 aaPredicted RBP15.29■□□□□ 0.04
RABGAP1-211ENST00000485090 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
RABGAP1-211ENST00000485090 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
RABGAP1-211ENST00000485090 POTEHQ6S545 545 aa14.9□□□□□ -0.02
RABGAP1-211ENST00000485090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.02
RABGAP1-211ENST00000485090 NCBP3Q53F19 620 aaKnown RBP14.69□□□□□ -0.06
RABGAP1-211ENST00000485090 CAPN15O75808 1086 aa14.51□□□□□ -0.09
RABGAP1-211ENST00000485090 DSG3P32926 999 aa14.51□□□□□ -0.09
RABGAP1-211ENST00000485090 U3KPZ7 1027 aaPredicted RBP14.44□□□□□ -0.1
RABGAP1-211ENST00000485090 SPINK5Q9NQ38 1064 aaPredicted RBP14.43□□□□□ -0.1
RABGAP1-211ENST00000485090 NPM3O75607 178 aaKnown RBP14.39□□□□□ -0.11
RABGAP1-211ENST00000485090 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
RABGAP1-211ENST00000485090 APLP2Q06481 763 aa14.09□□□□□ -0.15
RABGAP1-211ENST00000485090 ABCB7O75027 752 aa14.08□□□□□ -0.16
RABGAP1-211ENST00000485090 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
RABGAP1-211ENST00000485090 KCNA4P22459 653 aa14.04□□□□□ -0.16
RABGAP1-211ENST00000485090 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
RABGAP1-211ENST00000485090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.9□□□□□ -0.18
RABGAP1-211ENST00000485090 HNRNPUL2Q1KMD3 747 aaKnown RBP13.9□□□□□ -0.18
RABGAP1-211ENST00000485090 SLC4A2P04920 1241 aa13.88□□□□□ -0.19
RABGAP1-211ENST00000485090 CHRDL2Q6WN34 429 aa13.84□□□□□ -0.19
RABGAP1-211ENST00000485090 SAMD1Q6SPF0 538 aaPredicted RBP13.77□□□□□ -0.21
RABGAP1-211ENST00000485090 SP7Q8TDD2 431 aaPredicted RBP13.67□□□□□ -0.22
RABGAP1-211ENST00000485090 POLA2Q14181 598 aa13.56□□□□□ -0.24
RABGAP1-211ENST00000485090 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
RABGAP1-211ENST00000485090 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
RABGAP1-211ENST00000485090 HAX1O00165 279 aa13.35□□□□□ -0.27
RABGAP1-211ENST00000485090 PIP4P2Q8N4L2 257 aa13.35□□□□□ -0.27
RABGAP1-211ENST00000485090 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
RABGAP1-211ENST00000485090 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
RABGAP1-211ENST00000485090 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
RABGAP1-211ENST00000485090 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
RABGAP1-211ENST00000485090 FXR2P51116 673 aaKnown RBP eCLIP13.15□□□□□ -0.3
RABGAP1-211ENST00000485090 OSCARQ8IYS5 282 aa13.14□□□□□ -0.31
RABGAP1-211ENST00000485090 FOXD4L1Q9NU39 408 aa13.08□□□□□ -0.32
RABGAP1-211ENST00000485090 ATF5Q9Y2D1 282 aaPredicted RBP13.04□□□□□ -0.32
RABGAP1-211ENST00000485090 EVX2Q03828 476 aa13.03□□□□□ -0.32
RABGAP1-211ENST00000485090 ZBTB22O15209 634 aa12.87□□□□□ -0.35
RABGAP1-211ENST00000485090 PRKAR2AP13861 404 aaKnown RBP12.84□□□□□ -0.35
RABGAP1-211ENST00000485090 LHX8Q68G74 356 aa12.82□□□□□ -0.36
RABGAP1-211ENST00000485090 SPDYE2BA6NHP3 402 aa12.78□□□□□ -0.36
RABGAP1-211ENST00000485090 SPDYE6P0CI01 402 aa12.78□□□□□ -0.36
RABGAP1-211ENST00000485090 SPDYE2Q495Y8 402 aa12.78□□□□□ -0.36
RABGAP1-211ENST00000485090 C19orf67A6NJJ6 358 aa12.77□□□□□ -0.37
RABGAP1-211ENST00000485090 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
RABGAP1-211ENST00000485090 GABBR2O75899 941 aa12.75□□□□□ -0.37
RABGAP1-211ENST00000485090 SPDYE1Q8NFV5 336 aaPredicted RBP12.74□□□□□ -0.37
RABGAP1-211ENST00000485090 FBLN2P98095 1184 aa12.69□□□□□ -0.38
RABGAP1-211ENST00000485090 ATXN8OSP0DMR3 200 aa12.68□□□□□ -0.38
RABGAP1-211ENST00000485090 PLSCR2Q9NRY7 297 aa12.59□□□□□ -0.39
RABGAP1-211ENST00000485090 ZNF692Q9BU19 519 aaPredicted RBP12.55□□□□□ -0.4
RABGAP1-211ENST00000485090 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
RABGAP1-211ENST00000485090 CSRNP3Q8WYN3 585 aa12.5□□□□□ -0.41
RABGAP1-211ENST00000485090 SSUH2Q9Y2M2 353 aa12.49□□□□□ -0.41
RABGAP1-211ENST00000485090 EHMT2Q96KQ7 1210 aa12.48□□□□□ -0.41
RABGAP1-211ENST00000485090 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
RABGAP1-211ENST00000485090 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
RABGAP1-211ENST00000485090 CD44P16070 742 aaKnown RBP12.41□□□□□ -0.42
RABGAP1-211ENST00000485090 MKRN4PQ13434 485 aaPredicted RBP12.4□□□□□ -0.42
RABGAP1-211ENST00000485090 CLCN6P51797 869 aa12.38□□□□□ -0.43
RABGAP1-211ENST00000485090 DCBLD2Q96PD2 775 aa12.34□□□□□ -0.43
RABGAP1-211ENST00000485090 PABPN1Q86U42 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
RABGAP1-211ENST00000485090 FARP1Q9Y4F1 1045 aaPredicted RBP12.3□□□□□ -0.44
RABGAP1-211ENST00000485090 ZNF579Q8NAF0 562 aaKnown RBP12.15□□□□□ -0.46
RABGAP1-211ENST00000485090 ZRANB1Q9UGI0 708 aa12.14□□□□□ -0.47
RABGAP1-211ENST00000485090 POTEMA6NI47 508 aa12.11□□□□□ -0.47
RABGAP1-211ENST00000485090 OTUD5Q96G74 571 aa12.11□□□□□ -0.47
RABGAP1-211ENST00000485090 POTEGQ6S5H5 508 aa12.05□□□□□ -0.48
RABGAP1-211ENST00000485090 GALR2O43603 387 aaPredicted RBP12.04□□□□□ -0.48
RABGAP1-211ENST00000485090 POTEB2H3BUK9 544 aa12□□□□□ -0.49
RABGAP1-211ENST00000485090 PCDH10Q9P2E7 1040 aa11.97□□□□□ -0.49
RABGAP1-211ENST00000485090 PAK3O75914 559 aaPredicted RBP11.96□□□□□ -0.49
RABGAP1-211ENST00000485090 CREBZFQ9NS37 354 aa11.93□□□□□ -0.5
RABGAP1-211ENST00000485090 STAG3Q9UJ98 1225 aa11.89□□□□□ -0.51
RABGAP1-211ENST00000485090 PHF12Q96QT6 1004 aa11.88□□□□□ -0.51
RABGAP1-211ENST00000485090 PELP1Q8IZL8 1130 aaKnown RBP11.84□□□□□ -0.51
RABGAP1-211ENST00000485090 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
RABGAP1-211ENST00000485090 MAMSTRQ6ZN01 415 aa11.8□□□□□ -0.52
RABGAP1-211ENST00000485090 NPM1P06748 294 aaKnown RBP eCLIP11.78□□□□□ -0.52
RABGAP1-211ENST00000485090 SLC39A7Q92504 469 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms