RNA–Protein interactions for RNA: ENST00000484880.1

SERBP1-206, Transcript of SERPINE1 mRNA binding protein 1, humanhuman

TSL 2

Gene SERBP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERBP1-206ENST00000484880 AEBP2Q6ZN18 517 aaPredicted RBP28.11■■■□□ 2.09
SERBP1-206ENST00000484880 CHIC1Q5VXU3 224 aa26.5■■□□□ 1.83
SERBP1-206ENST00000484880 SENP3Q9H4L4 574 aaPredicted RBP23.83■■□□□ 1.41
SERBP1-206ENST00000484880 PHF23Q9BUL5 403 aaPredicted RBP23.58■■□□□ 1.37
SERBP1-206ENST00000484880 FOXD1Q16676 465 aa22.33■■□□□ 1.17
SERBP1-206ENST00000484880 PLPPR3Q6T4P5 718 aa21.04■□□□□ 0.96
SERBP1-206ENST00000484880 PPP6R1Q9UPN7 881 aa20.84■□□□□ 0.93
SERBP1-206ENST00000484880 MSH5O43196 834 aa20.83■□□□□ 0.93
SERBP1-206ENST00000484880 PIAS4Q8N2W9 510 aaPredicted RBP20.76■□□□□ 0.91
SERBP1-206ENST00000484880 ADRA2BP18089 450 aa20.71■□□□□ 0.91
SERBP1-206ENST00000484880 POTEDQ86YR6 584 aa20.62■□□□□ 0.89
SERBP1-206ENST00000484880 MAPK8IP2Q13387 824 aaPredicted RBP19.1■□□□□ 0.65
SERBP1-206ENST00000484880 DMRT2Q9Y5R5 561 aa18.93■□□□□ 0.62
SERBP1-206ENST00000484880 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
SERBP1-206ENST00000484880 PPP4R3CPQ6ZMV5 832 aa18.47■□□□□ 0.55
SERBP1-206ENST00000484880 HOXD11P31277 338 aaPredicted RBP18.21■□□□□ 0.51
SERBP1-206ENST00000484880 CNKSR2Q8WXI2 1034 aa18.11■□□□□ 0.49
SERBP1-206ENST00000484880 DCAF8L1A6NGE4 600 aa18.07■□□□□ 0.48
SERBP1-206ENST00000484880 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
SERBP1-206ENST00000484880 CACNB1Q02641 598 aaPredicted RBP17.94■□□□□ 0.46
SERBP1-206ENST00000484880 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
SERBP1-206ENST00000484880 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
SERBP1-206ENST00000484880 DNAJC5BQ9UF47 199 aa17.55■□□□□ 0.4
SERBP1-206ENST00000484880 C1QBPQ07021 282 aaKnown RBP17.51■□□□□ 0.39
SERBP1-206ENST00000484880 NPM3O75607 178 aaKnown RBP17.5■□□□□ 0.39
SERBP1-206ENST00000484880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.357e-10■□□□□ 11.3
SERBP1-206ENST00000484880 KCNA4P22459 653 aa17.09■□□□□ 0.33
SERBP1-206ENST00000484880 U3KPZ7 1027 aaPredicted RBP16.99■□□□□ 0.31
SERBP1-206ENST00000484880 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
SERBP1-206ENST00000484880 SPINK5Q9NQ38 1064 aaPredicted RBP16.78■□□□□ 0.28
SERBP1-206ENST00000484880 DSG3P32926 999 aa16.67■□□□□ 0.26
SERBP1-206ENST00000484880 CAPN15O75808 1086 aa16.65■□□□□ 0.26
SERBP1-206ENST00000484880 TRHP20396 242 aaPredicted RBP16.38■□□□□ 0.21
SERBP1-206ENST00000484880 ABCB7O75027 752 aa16.32■□□□□ 0.2
SERBP1-206ENST00000484880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
SERBP1-206ENST00000484880 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
SERBP1-206ENST00000484880 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
SERBP1-206ENST00000484880 APLP2Q06481 763 aa16.29■□□□□ 0.2
SERBP1-206ENST00000484880 SAMD1Q6SPF0 538 aaPredicted RBP16.25■□□□□ 0.19
SERBP1-206ENST00000484880 MYCNP04198 464 aaPredicted RBP16.11■□□□□ 0.17
SERBP1-206ENST00000484880 POTEHQ6S545 545 aa16.1■□□□□ 0.17
SERBP1-206ENST00000484880 SLC4A1APQ9BWU0 796 aaKnown RBP16.02■□□□□ 0.16
SERBP1-206ENST00000484880 POLA2Q14181 598 aa15.94■□□□□ 0.14
SERBP1-206ENST00000484880 FOXD4L1Q9NU39 408 aa15.91■□□□□ 0.14
SERBP1-206ENST00000484880 ATF5Q9Y2D1 282 aaPredicted RBP15.89■□□□□ 0.13
SERBP1-206ENST00000484880 RBM42Q9BTD8 480 aaKnown RBP15.78■□□□□ 0.12
SERBP1-206ENST00000484880 ZBTB22O15209 634 aa15.77■□□□□ 0.12
SERBP1-206ENST00000484880 CHRDL2Q6WN34 429 aa15.57■□□□□ 0.08
SERBP1-206ENST00000484880 ZBTB12Q9Y330 459 aaPredicted RBP15.5■□□□□ 0.07
SERBP1-206ENST00000484880 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
SERBP1-206ENST00000484880 AKT1S1Q96B36 256 aa15.45■□□□□ 0.06
SERBP1-206ENST00000484880 ATXN8OSP0DMR3 200 aa15.4■□□□□ 0.06
SERBP1-206ENST00000484880 REM2Q8IYK8 340 aaPredicted RBP15.35■□□□□ 0.05
SERBP1-206ENST00000484880 PITPNM1O00562 1244 aa15.2■□□□□ 0.02
SERBP1-206ENST00000484880 PIP4P2Q8N4L2 257 aa15.2■□□□□ 0.02
SERBP1-206ENST00000484880 MKRN4PQ13434 485 aaPredicted RBP15.15■□□□□ 0.02
SERBP1-206ENST00000484880 FXR2P51116 673 aaKnown RBP eCLIP15.1■□□□□ 0.016e-7■■□□□ 13.5
SERBP1-206ENST00000484880 FBLN2P98095 1184 aa15.09■□□□□ 0.01
SERBP1-206ENST00000484880 SPDYE2BA6NHP3 402 aa15.08■□□□□ 0
SERBP1-206ENST00000484880 SPDYE6P0CI01 402 aa15.08■□□□□ 0
SERBP1-206ENST00000484880 SPDYE2Q495Y8 402 aa15.08■□□□□ 0
SERBP1-206ENST00000484880 SP7Q8TDD2 431 aaPredicted RBP15.03■□□□□ -0
SERBP1-206ENST00000484880 SSUH2Q9Y2M2 353 aa14.94□□□□□ -0.02
SERBP1-206ENST00000484880 CSRNP3Q8WYN3 585 aa14.9□□□□□ -0.02
SERBP1-206ENST00000484880 HAX1O00165 279 aa14.89□□□□□ -0.03
SERBP1-206ENST00000484880 ZNF692Q9BU19 519 aaPredicted RBP14.87□□□□□ -0.03
SERBP1-206ENST00000484880 EVX2Q03828 476 aa14.85□□□□□ -0.03
SERBP1-206ENST00000484880 SPDYE1Q8NFV5 336 aaPredicted RBP14.82□□□□□ -0.04
SERBP1-206ENST00000484880 CLEC11AQ9Y240 323 aa14.81□□□□□ -0.04
SERBP1-206ENST00000484880 PRKAR2AP13861 404 aaKnown RBP14.76□□□□□ -0.05
SERBP1-206ENST00000484880 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
SERBP1-206ENST00000484880 CHADLQ6NUI6 762 aa14.62□□□□□ -0.07
SERBP1-206ENST00000484880 C19orf67A6NJJ6 358 aa14.61□□□□□ -0.07
SERBP1-206ENST00000484880 EHMT2Q96KQ7 1210 aa14.57□□□□□ -0.08
SERBP1-206ENST00000484880 PRR29P0C7W0 189 aa14.54□□□□□ -0.08
SERBP1-206ENST00000484880 GABBR2O75899 941 aa14.42□□□□□ -0.1
SERBP1-206ENST00000484880 FARP1Q9Y4F1 1045 aaPredicted RBP14.37□□□□□ -0.11
SERBP1-206ENST00000484880 CD44P16070 742 aaKnown RBP14.28□□□□□ -0.12
SERBP1-206ENST00000484880 SPDYE4A6NLX3 237 aa14.27□□□□□ -0.13
SERBP1-206ENST00000484880 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
SERBP1-206ENST00000484880 POTEIP0CG38 1075 aa14.19□□□□□ -0.14
SERBP1-206ENST00000484880 STAG3Q9UJ98 1225 aa14.17□□□□□ -0.14
SERBP1-206ENST00000484880 LHX8Q68G74 356 aa14.09□□□□□ -0.15
SERBP1-206ENST00000484880 ZNF579Q8NAF0 562 aaKnown RBP14.08□□□□□ -0.16
SERBP1-206ENST00000484880 ZRANB1Q9UGI0 708 aa14.06□□□□□ -0.16
SERBP1-206ENST00000484880 MNX1P50219 401 aaPredicted RBP14.03□□□□□ -0.16
SERBP1-206ENST00000484880 CLCN6P51797 869 aa14.02□□□□□ -0.17
SERBP1-206ENST00000484880 PROM2Q8N271 834 aa13.99□□□□□ -0.17
SERBP1-206ENST00000484880 GALR2O43603 387 aaPredicted RBP13.96□□□□□ -0.17
SERBP1-206ENST00000484880 DCBLD2Q96PD2 775 aa13.92□□□□□ -0.18
SERBP1-206ENST00000484880 PHF12Q96QT6 1004 aa13.91□□□□□ -0.18
SERBP1-206ENST00000484880 NPM1P06748 294 aaKnown RBP eCLIP13.84□□□□□ -0.19
SERBP1-206ENST00000484880 PAK3O75914 559 aaPredicted RBP13.82□□□□□ -0.2
SERBP1-206ENST00000484880 PELP1Q8IZL8 1130 aaKnown RBP13.74□□□□□ -0.21
SERBP1-206ENST00000484880 POTEB2H3BUK9 544 aa13.73□□□□□ -0.21
SERBP1-206ENST00000484880 MS4A3Q96HJ5 214 aa13.72□□□□□ -0.21
SERBP1-206ENST00000484880 TSPYL2Q9H2G4 693 aaPredicted RBP13.67□□□□□ -0.22
SERBP1-206ENST00000484880 CCDC61Q9Y6R9 512 aa13.67□□□□□ -0.22
SERBP1-206ENST00000484880 OTUD5Q96G74 571 aa13.65□□□□□ -0.22
SERBP1-206ENST00000484880 ASTLQ6HA08 431 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms