RNA–Protein interactions for RNA: ENST00000484714.2

GRAMD1C-211, Transcript of GRAM domain containing 1C, humanhuman

TSL 5

Gene GRAMD1C, Length 814 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1C-211ENST00000484714 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
GRAMD1C-211ENST00000484714 AEBP2Q6ZN18 517 aaPredicted RBP20.14■□□□□ 0.81
GRAMD1C-211ENST00000484714 PHF23Q9BUL5 403 aaPredicted RBP17.75■□□□□ 0.43
GRAMD1C-211ENST00000484714 SENP3Q9H4L4 574 aaPredicted RBP17.05■□□□□ 0.32
GRAMD1C-211ENST00000484714 PLPPR3Q6T4P5 718 aa16.56■□□□□ 0.24
GRAMD1C-211ENST00000484714 FOXD1Q16676 465 aa15.75■□□□□ 0.11
GRAMD1C-211ENST00000484714 ADRA2BP18089 450 aa15.5■□□□□ 0.07
GRAMD1C-211ENST00000484714 PPP6R1Q9UPN7 881 aa15.5■□□□□ 0.07
GRAMD1C-211ENST00000484714 PIAS4Q8N2W9 510 aaPredicted RBP14.94□□□□□ -0.02
GRAMD1C-211ENST00000484714 KCNA4P22459 653 aa14.79□□□□□ -0.04
GRAMD1C-211ENST00000484714 PPP4R3CPQ6ZMV5 832 aa14.64□□□□□ -0.07
GRAMD1C-211ENST00000484714 NCBP3Q53F19 620 aaKnown RBP14.41□□□□□ -0.1
GRAMD1C-211ENST00000484714 MSH5O43196 834 aa14.37□□□□□ -0.11
GRAMD1C-211ENST00000484714 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
GRAMD1C-211ENST00000484714 EHMT2Q96KQ7 1210 aa14.23□□□□□ -0.13
GRAMD1C-211ENST00000484714 SLC4A1APQ9BWU0 796 aaKnown RBP14.18□□□□□ -0.14
GRAMD1C-211ENST00000484714 NPM3O75607 178 aaKnown RBP14.17□□□□□ -0.14
GRAMD1C-211ENST00000484714 CNKSR2Q8WXI2 1034 aa14.15□□□□□ -0.14
GRAMD1C-211ENST00000484714 POTEDQ86YR6 584 aa14.09□□□□□ -0.15
GRAMD1C-211ENST00000484714 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
GRAMD1C-211ENST00000484714 MAPK8IP2Q13387 824 aaPredicted RBP13.91□□□□□ -0.18
GRAMD1C-211ENST00000484714 DNAJC5BQ9UF47 199 aa13.82□□□□□ -0.2
GRAMD1C-211ENST00000484714 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.21
GRAMD1C-211ENST00000484714 DMRT2Q9Y5R5 561 aa13.69□□□□□ -0.22
GRAMD1C-211ENST00000484714 ZBTB22O15209 634 aa13.62□□□□□ -0.23
GRAMD1C-211ENST00000484714 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
GRAMD1C-211ENST00000484714 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
GRAMD1C-211ENST00000484714 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
GRAMD1C-211ENST00000484714 MYCNP04198 464 aaPredicted RBP13.1□□□□□ -0.31
GRAMD1C-211ENST00000484714 ATXN8OSP0DMR3 200 aa13.05□□□□□ -0.32
GRAMD1C-211ENST00000484714 DCAF8L1A6NGE4 600 aa12.97□□□□□ -0.33
GRAMD1C-211ENST00000484714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.9□□□□□ -0.34
GRAMD1C-211ENST00000484714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.79□□□□□ -0.36
GRAMD1C-211ENST00000484714 HNRNPUL2Q1KMD3 747 aaKnown RBP12.79□□□□□ -0.36
GRAMD1C-211ENST00000484714 SAMD1Q6SPF0 538 aaPredicted RBP12.76□□□□□ -0.37
GRAMD1C-211ENST00000484714 U3KPZ7 1027 aaPredicted RBP12.76□□□□□ -0.37
GRAMD1C-211ENST00000484714 ATF5Q9Y2D1 282 aaPredicted RBP12.68□□□□□ -0.38
GRAMD1C-211ENST00000484714 APLP2Q06481 763 aa12.56□□□□□ -0.4
GRAMD1C-211ENST00000484714 FKBP8Q14318 412 aa12.53□□□□□ -0.4
GRAMD1C-211ENST00000484714 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
GRAMD1C-211ENST00000484714 RNF39Q9H2S5 420 aa12.35□□□□□ -0.43
GRAMD1C-211ENST00000484714 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.45
GRAMD1C-211ENST00000484714 SPINK5Q9NQ38 1064 aaPredicted RBP12.25□□□□□ -0.45
GRAMD1C-211ENST00000484714 C1QBPQ07021 282 aaKnown RBP12.24□□□□□ -0.45
GRAMD1C-211ENST00000484714 TRHP20396 242 aaPredicted RBP12.21□□□□□ -0.45
GRAMD1C-211ENST00000484714 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
GRAMD1C-211ENST00000484714 MKRN4PQ13434 485 aaPredicted RBP12.18□□□□□ -0.46
GRAMD1C-211ENST00000484714 CAPN15O75808 1086 aa12.17□□□□□ -0.46
GRAMD1C-211ENST00000484714 POLA2Q14181 598 aa12.15□□□□□ -0.46
GRAMD1C-211ENST00000484714 FBLN2P98095 1184 aa12.14□□□□□ -0.47
GRAMD1C-211ENST00000484714 SPDYE4A6NLX3 237 aa12.11□□□□□ -0.47
GRAMD1C-211ENST00000484714 PROM2Q8N271 834 aa12.05□□□□□ -0.48
GRAMD1C-211ENST00000484714 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
GRAMD1C-211ENST00000484714 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
GRAMD1C-211ENST00000484714 ABCB7O75027 752 aa11.96□□□□□ -0.49
GRAMD1C-211ENST00000484714 DSG3P32926 999 aa11.9□□□□□ -0.5
GRAMD1C-211ENST00000484714 VASPP50552 380 aaPredicted RBP11.82□□□□□ -0.52
GRAMD1C-211ENST00000484714 CACNB1Q02641 598 aaPredicted RBP11.79□□□□□ -0.52
GRAMD1C-211ENST00000484714 SLC24A1O60721 1099 aa11.77□□□□□ -0.53
GRAMD1C-211ENST00000484714 SPDYE2BA6NHP3 402 aa11.73□□□□□ -0.53
GRAMD1C-211ENST00000484714 SPDYE6P0CI01 402 aa11.73□□□□□ -0.53
GRAMD1C-211ENST00000484714 SPDYE2Q495Y8 402 aa11.73□□□□□ -0.53
GRAMD1C-211ENST00000484714 ZNF692Q9BU19 519 aaPredicted RBP11.72□□□□□ -0.53
GRAMD1C-211ENST00000484714 OSCARQ8IYS5 282 aa11.69□□□□□ -0.54
GRAMD1C-211ENST00000484714 SSUH2Q9Y2M2 353 aa11.69□□□□□ -0.54
GRAMD1C-211ENST00000484714 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
GRAMD1C-211ENST00000484714 STAG3Q9UJ98 1225 aa11.62□□□□□ -0.55
GRAMD1C-211ENST00000484714 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
GRAMD1C-211ENST00000484714 PKD2Q13563 968 aa11.48□□□□□ -0.57
GRAMD1C-211ENST00000484714 SPOCK2Q92563 424 aa11.48□□□□□ -0.57
GRAMD1C-211ENST00000484714 KLHL34Q8N239 644 aa11.47□□□□□ -0.57
GRAMD1C-211ENST00000484714 PLCD3Q8N3E9 789 aa11.45□□□□□ -0.58
GRAMD1C-211ENST00000484714 MIER1Q8N108 512 aa11.43□□□□□ -0.58
GRAMD1C-211ENST00000484714 PLEKHG5O94827 1062 aa11.35□□□□□ -0.59
GRAMD1C-211ENST00000484714 ZBTB47Q9UFB7 747 aaPredicted RBP11.35□□□□□ -0.59
GRAMD1C-211ENST00000484714 RBM42Q9BTD8 480 aaKnown RBP11.34□□□□□ -0.59
GRAMD1C-211ENST00000484714 PLCB2Q00722 1185 aa11.32□□□□□ -0.6
GRAMD1C-211ENST00000484714 ECM2O94769 699 aaPredicted RBP11.31□□□□□ -0.6
GRAMD1C-211ENST00000484714 AKT1S1Q96B36 256 aa11.31□□□□□ -0.6
GRAMD1C-211ENST00000484714 DCAF8L2P0C7V8 631 aa11.3□□□□□ -0.6
GRAMD1C-211ENST00000484714 SPDYE1Q8NFV5 336 aaPredicted RBP11.27□□□□□ -0.61
GRAMD1C-211ENST00000484714 RGL2O15211 777 aa11.18□□□□□ -0.62
GRAMD1C-211ENST00000484714 TRIM41Q8WV44 630 aa11.18□□□□□ -0.62
GRAMD1C-211ENST00000484714 CIZ1Q9ULV3 898 aaPredicted RBP11.18□□□□□ -0.62
GRAMD1C-211ENST00000484714 REM2Q8IYK8 340 aaPredicted RBP11.17□□□□□ -0.62
GRAMD1C-211ENST00000484714 BBXQ8WY36 941 aaPredicted RBP11.16□□□□□ -0.62
GRAMD1C-211ENST00000484714 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
GRAMD1C-211ENST00000484714 PRR29P0C7W0 189 aa11.13□□□□□ -0.63
GRAMD1C-211ENST00000484714 CLEC11AQ9Y240 323 aa11.13□□□□□ -0.63
GRAMD1C-211ENST00000484714 NUBP1P53384 320 aa11.12□□□□□ -0.63
GRAMD1C-211ENST00000484714 GSE1Q14687 1217 aa11.12□□□□□ -0.63
GRAMD1C-211ENST00000484714 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.12□□□□□ -0.63
GRAMD1C-211ENST00000484714 CREBZFQ9NS37 354 aa11.11□□□□□ -0.63
GRAMD1C-211ENST00000484714 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
GRAMD1C-211ENST00000484714 MNX1P50219 401 aaPredicted RBP11.08□□□□□ -0.64
GRAMD1C-211ENST00000484714 PITPNM1O00562 1244 aa11.03□□□□□ -0.64
GRAMD1C-211ENST00000484714 VSIG10Q8N0Z9 540 aa11.02□□□□□ -0.65
GRAMD1C-211ENST00000484714 DCAF8Q5TAQ9 597 aa11.01□□□□□ -0.65
GRAMD1C-211ENST00000484714 CHGAP10645 457 aaKnown RBP11□□□□□ -0.65
GRAMD1C-211ENST00000484714 PAXIP1Q6ZW49 1069 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms