RNA–Protein interactions for RNA: ENST00000484542.1

KALRN-218, Transcript of kalirin RhoGEF kinase, humanhuman

TSL 3

Gene KALRN, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KALRN-218ENST00000484542 AEBP2Q6ZN18 517 aaPredicted RBP31.59■■■□□ 2.65
KALRN-218ENST00000484542 CHIC1Q5VXU3 224 aa29.57■■■□□ 2.32
KALRN-218ENST00000484542 SENP3Q9H4L4 574 aaPredicted RBP26.9■■□□□ 1.9
KALRN-218ENST00000484542 PHF23Q9BUL5 403 aaPredicted RBP26.54■■□□□ 1.84
KALRN-218ENST00000484542 FOXD1Q16676 465 aa25.18■■□□□ 1.62
KALRN-218ENST00000484542 POTEDQ86YR6 584 aa23.76■■□□□ 1.39
KALRN-218ENST00000484542 MSH5O43196 834 aa23.62■■□□□ 1.37
KALRN-218ENST00000484542 PLPPR3Q6T4P5 718 aa23.42■■□□□ 1.34
KALRN-218ENST00000484542 PIAS4Q8N2W9 510 aaPredicted RBP23.39■■□□□ 1.33
KALRN-218ENST00000484542 PPP6R1Q9UPN7 881 aa23.3■■□□□ 1.32
KALRN-218ENST00000484542 ADRA2BP18089 450 aa23.18■■□□□ 1.3
KALRN-218ENST00000484542 MAPK8IP2Q13387 824 aaPredicted RBP21.42■■□□□ 1.02
KALRN-218ENST00000484542 DMRT2Q9Y5R5 561 aa21.3■■□□□ 1
KALRN-218ENST00000484542 SCAF1Q9H7N4 1312 aaKnown RBP21.1■□□□□ 0.97
KALRN-218ENST00000484542 CACNB1Q02641 598 aaPredicted RBP20.52■□□□□ 0.88
KALRN-218ENST00000484542 PPP4R3CPQ6ZMV5 832 aa20.51■□□□□ 0.87
KALRN-218ENST00000484542 DCAF8L1A6NGE4 600 aa20.41■□□□□ 0.86
KALRN-218ENST00000484542 HOXD11P31277 338 aaPredicted RBP20.38■□□□□ 0.85
KALRN-218ENST00000484542 CNKSR2Q8WXI2 1034 aa20.19■□□□□ 0.82
KALRN-218ENST00000484542 RNF39Q9H2S5 420 aa20.19■□□□□ 0.82
KALRN-218ENST00000484542 RNF216Q9NWF9 866 aaPredicted RBP20.1■□□□□ 0.81
KALRN-218ENST00000484542 C1QBPQ07021 282 aaKnown RBP19.82■□□□□ 0.76
KALRN-218ENST00000484542 DNAJC5BQ9UF47 199 aa19.71■□□□□ 0.75
KALRN-218ENST00000484542 NCBP3Q53F19 620 aaKnown RBP19.55■□□□□ 0.72
KALRN-218ENST00000484542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.69
KALRN-218ENST00000484542 NPM3O75607 178 aaKnown RBP19.35■□□□□ 0.69
KALRN-218ENST00000484542 U3KPZ7 1027 aaPredicted RBP18.98■□□□□ 0.63
KALRN-218ENST00000484542 SPINK5Q9NQ38 1064 aaPredicted RBP18.84■□□□□ 0.61
KALRN-218ENST00000484542 DSG3P32926 999 aa18.78■□□□□ 0.6
KALRN-218ENST00000484542 CAPN15O75808 1086 aa18.76■□□□□ 0.59
KALRN-218ENST00000484542 KCNA4P22459 653 aa18.66■□□□□ 0.58
KALRN-218ENST00000484542 SLC4A2P04920 1241 aa18.6■□□□□ 0.57
KALRN-218ENST00000484542 POTEHQ6S545 545 aa18.53■□□□□ 0.56
KALRN-218ENST00000484542 TRHP20396 242 aaPredicted RBP18.38■□□□□ 0.53
KALRN-218ENST00000484542 ABCB7O75027 752 aa18.33■□□□□ 0.52
KALRN-218ENST00000484542 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
KALRN-218ENST00000484542 APLP2Q06481 763 aa18.29■□□□□ 0.52
KALRN-218ENST00000484542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.21■□□□□ 0.51
KALRN-218ENST00000484542 HNRNPUL2Q1KMD3 747 aaKnown RBP18.21■□□□□ 0.51
KALRN-218ENST00000484542 SAMD1Q6SPF0 538 aaPredicted RBP18.11■□□□□ 0.49
KALRN-218ENST00000484542 MYCNP04198 464 aaPredicted RBP17.85■□□□□ 0.45
KALRN-218ENST00000484542 RBM42Q9BTD8 480 aaKnown RBP17.85■□□□□ 0.45
KALRN-218ENST00000484542 POLA2Q14181 598 aa17.81■□□□□ 0.44
KALRN-218ENST00000484542 CHRDL2Q6WN34 429 aa17.66■□□□□ 0.42
KALRN-218ENST00000484542 ATF5Q9Y2D1 282 aaPredicted RBP17.57■□□□□ 0.4
KALRN-218ENST00000484542 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
KALRN-218ENST00000484542 FOXD4L1Q9NU39 408 aa17.48■□□□□ 0.39
KALRN-218ENST00000484542 AKT1S1Q96B36 256 aa17.39■□□□□ 0.37
KALRN-218ENST00000484542 ZBTB12Q9Y330 459 aaPredicted RBP17.35■□□□□ 0.37
KALRN-218ENST00000484542 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
KALRN-218ENST00000484542 REM2Q8IYK8 340 aaPredicted RBP17.26■□□□□ 0.35
KALRN-218ENST00000484542 ZBTB22O15209 634 aa17.19■□□□□ 0.34
KALRN-218ENST00000484542 PIP4P2Q8N4L2 257 aa17.19■□□□□ 0.34
KALRN-218ENST00000484542 SP7Q8TDD2 431 aaPredicted RBP17.19■□□□□ 0.34
KALRN-218ENST00000484542 PITPNM1O00562 1244 aa17.1■□□□□ 0.33
KALRN-218ENST00000484542 FXR2P51116 673 aaKnown RBP eCLIP17.01■□□□□ 0.31
KALRN-218ENST00000484542 ATXN8OSP0DMR3 200 aa16.96■□□□□ 0.31
KALRN-218ENST00000484542 HAX1O00165 279 aa16.93■□□□□ 0.3
KALRN-218ENST00000484542 SPDYE2BA6NHP3 402 aa16.83■□□□□ 0.28
KALRN-218ENST00000484542 SPDYE6P0CI01 402 aa16.83■□□□□ 0.28
KALRN-218ENST00000484542 SPDYE2Q495Y8 402 aa16.83■□□□□ 0.28
KALRN-218ENST00000484542 EVX2Q03828 476 aa16.79■□□□□ 0.28
KALRN-218ENST00000484542 FBLN2P98095 1184 aa16.78■□□□□ 0.28
KALRN-218ENST00000484542 MKRN4PQ13434 485 aaPredicted RBP16.73■□□□□ 0.27
KALRN-218ENST00000484542 PRKAR2AP13861 404 aaKnown RBP16.63■□□□□ 0.25
KALRN-218ENST00000484542 CLEC11AQ9Y240 323 aa16.62■□□□□ 0.25
KALRN-218ENST00000484542 SPDYE1Q8NFV5 336 aaPredicted RBP16.61■□□□□ 0.25
KALRN-218ENST00000484542 SSUH2Q9Y2M2 353 aa16.6■□□□□ 0.25
KALRN-218ENST00000484542 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
KALRN-218ENST00000484542 C19orf67A6NJJ6 358 aa16.49■□□□□ 0.23
KALRN-218ENST00000484542 CHADLQ6NUI6 762 aa16.4■□□□□ 0.22
KALRN-218ENST00000484542 GABBR2O75899 941 aa16.34■□□□□ 0.21
KALRN-218ENST00000484542 PABPN1Q86U42 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
KALRN-218ENST00000484542 PRR29P0C7W0 189 aa16.28■□□□□ 0.2
KALRN-218ENST00000484542 LHX8Q68G74 356 aa16.11■□□□□ 0.17
KALRN-218ENST00000484542 FARP1Q9Y4F1 1045 aaPredicted RBP16.08■□□□□ 0.16
KALRN-218ENST00000484542 CD44P16070 742 aaKnown RBP16.07■□□□□ 0.16
KALRN-218ENST00000484542 POTEIP0CG38 1075 aa16.04■□□□□ 0.16
KALRN-218ENST00000484542 CSRNP3Q8WYN3 585 aa16.03■□□□□ 0.16
KALRN-218ENST00000484542 CLCN6P51797 869 aa15.85■□□□□ 0.13
KALRN-218ENST00000484542 CREBZFQ9NS37 354 aa15.85■□□□□ 0.13
KALRN-218ENST00000484542 ZNF579Q8NAF0 562 aaKnown RBP15.82■□□□□ 0.12
KALRN-218ENST00000484542 ZRANB1Q9UGI0 708 aa15.78■□□□□ 0.12
KALRN-218ENST00000484542 DCBLD2Q96PD2 775 aa15.76■□□□□ 0.11
KALRN-218ENST00000484542 STAG3Q9UJ98 1225 aa15.75■□□□□ 0.11
KALRN-218ENST00000484542 SPDYE4A6NLX3 237 aa15.68■□□□□ 0.1
KALRN-218ENST00000484542 GALR2O43603 387 aaPredicted RBP15.67■□□□□ 0.1
KALRN-218ENST00000484542 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
KALRN-218ENST00000484542 PHF12Q96QT6 1004 aa15.57■□□□□ 0.08
KALRN-218ENST00000484542 MNX1P50219 401 aaPredicted RBP15.56■□□□□ 0.08
KALRN-218ENST00000484542 POTEB2H3BUK9 544 aa15.51■□□□□ 0.07
KALRN-218ENST00000484542 PAK3O75914 559 aaPredicted RBP15.51■□□□□ 0.07
KALRN-218ENST00000484542 OTUD5Q96G74 571 aa15.49■□□□□ 0.07
KALRN-218ENST00000484542 NPM1P06748 294 aaKnown RBP eCLIP15.47■□□□□ 0.07
KALRN-218ENST00000484542 PELP1Q8IZL8 1130 aaKnown RBP15.44■□□□□ 0.06
KALRN-218ENST00000484542 PLSCR2Q9NRY7 297 aa15.36■□□□□ 0.05
KALRN-218ENST00000484542 MS4A3Q96HJ5 214 aa15.34■□□□□ 0.05
KALRN-218ENST00000484542 ASTLQ6HA08 431 aaPredicted RBP15.31■□□□□ 0.04
KALRN-218ENST00000484542 PROM2Q8N271 834 aa15.3■□□□□ 0.04
KALRN-218ENST00000484542 ATMINO43313 823 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms