RNA–Protein interactions for RNA: ENST00000484331.5

RAPGEF4-211, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 4

Gene RAPGEF4, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-211ENST00000484331 AEBP2Q6ZN18 517 aaPredicted RBP19.66■□□□□ 0.74
RAPGEF4-211ENST00000484331 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
RAPGEF4-211ENST00000484331 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.28
RAPGEF4-211ENST00000484331 SENP3Q9H4L4 574 aaPredicted RBP16.69■□□□□ 0.26
RAPGEF4-211ENST00000484331 FOXD1Q16676 465 aa15.5■□□□□ 0.07
RAPGEF4-211ENST00000484331 PLPPR3Q6T4P5 718 aa15.44■□□□□ 0.06
RAPGEF4-211ENST00000484331 PPP6R1Q9UPN7 881 aa14.83□□□□□ -0.04
RAPGEF4-211ENST00000484331 ADRA2BP18089 450 aa14.8□□□□□ -0.04
RAPGEF4-211ENST00000484331 PIAS4Q8N2W9 510 aaPredicted RBP14.59□□□□□ -0.07
RAPGEF4-211ENST00000484331 MSH5O43196 834 aa14.34□□□□□ -0.11
RAPGEF4-211ENST00000484331 PPP4R3CPQ6ZMV5 832 aa13.59□□□□□ -0.23
RAPGEF4-211ENST00000484331 SCAF1Q9H7N4 1312 aaKnown RBP13.53□□□□□ -0.24
RAPGEF4-211ENST00000484331 MAPK8IP2Q13387 824 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF4-211ENST00000484331 DMRT2Q9Y5R5 561 aa13.31□□□□□ -0.28
RAPGEF4-211ENST00000484331 POTEDQ86YR6 584 aa13.26□□□□□ -0.29
RAPGEF4-211ENST00000484331 CNKSR2Q8WXI2 1034 aa13.23□□□□□ -0.29
RAPGEF4-211ENST00000484331 NCBP3Q53F19 620 aaKnown RBP13.19□□□□□ -0.3
RAPGEF4-211ENST00000484331 KCNA4P22459 653 aa13.16□□□□□ -0.3
RAPGEF4-211ENST00000484331 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.33
RAPGEF4-211ENST00000484331 RNF216Q9NWF9 866 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF4-211ENST00000484331 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF4-211ENST00000484331 DCAF8L1A6NGE4 600 aa12.71□□□□□ -0.37
RAPGEF4-211ENST00000484331 DNAJC5BQ9UF47 199 aa12.68□□□□□ -0.38
RAPGEF4-211ENST00000484331 SLC4A1APQ9BWU0 796 aaKnown RBP12.5□□□□□ -0.41
RAPGEF4-211ENST00000484331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.36□□□□□ -0.43
RAPGEF4-211ENST00000484331 SLC4A2P04920 1241 aa12.32□□□□□ -0.44
RAPGEF4-211ENST00000484331 RNF39Q9H2S5 420 aa12.29□□□□□ -0.44
RAPGEF4-211ENST00000484331 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF4-211ENST00000484331 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
RAPGEF4-211ENST00000484331 C1QBPQ07021 282 aaKnown RBP12.12□□□□□ -0.47
RAPGEF4-211ENST00000484331 ZBTB22O15209 634 aa12.11□□□□□ -0.47
RAPGEF4-211ENST00000484331 MYCNP04198 464 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF4-211ENST00000484331 CACNB1Q02641 598 aaPredicted RBP12.02□□□□□ -0.49
RAPGEF4-211ENST00000484331 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
RAPGEF4-211ENST00000484331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.96□□□□□ -0.49
RAPGEF4-211ENST00000484331 HNRNPUL2Q1KMD3 747 aaKnown RBP11.96□□□□□ -0.49
RAPGEF4-211ENST00000484331 CSRNP3Q8WYN3 585 aa11.94□□□□□ -0.5
RAPGEF4-211ENST00000484331 SAMD1Q6SPF0 538 aaPredicted RBP11.92□□□□□ -0.5
RAPGEF4-211ENST00000484331 APLP2Q06481 763 aa11.86□□□□□ -0.51
RAPGEF4-211ENST00000484331 SPINK5Q9NQ38 1064 aaPredicted RBP11.86□□□□□ -0.51
RAPGEF4-211ENST00000484331 CAPN15O75808 1086 aa11.8□□□□□ -0.52
RAPGEF4-211ENST00000484331 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
RAPGEF4-211ENST00000484331 ATXN8OSP0DMR3 200 aa11.72□□□□□ -0.53
RAPGEF4-211ENST00000484331 TRHP20396 242 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF4-211ENST00000484331 ATF5Q9Y2D1 282 aaPredicted RBP11.71□□□□□ -0.53
RAPGEF4-211ENST00000484331 DSG3P32926 999 aa11.65□□□□□ -0.54
RAPGEF4-211ENST00000484331 ABCB7O75027 752 aa11.57□□□□□ -0.56
RAPGEF4-211ENST00000484331 POLA2Q14181 598 aa11.5□□□□□ -0.57
RAPGEF4-211ENST00000484331 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
RAPGEF4-211ENST00000484331 FBLN2P98095 1184 aa11.22□□□□□ -0.61
RAPGEF4-211ENST00000484331 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
RAPGEF4-211ENST00000484331 OSCARQ8IYS5 282 aa11.14□□□□□ -0.63
RAPGEF4-211ENST00000484331 RBM42Q9BTD8 480 aaKnown RBP11.1□□□□□ -0.63
RAPGEF4-211ENST00000484331 SPDYE2BA6NHP3 402 aa11□□□□□ -0.65
RAPGEF4-211ENST00000484331 SPDYE6P0CI01 402 aa11□□□□□ -0.65
RAPGEF4-211ENST00000484331 SPDYE2Q495Y8 402 aa11□□□□□ -0.65
RAPGEF4-211ENST00000484331 AKT1S1Q96B36 256 aa10.94□□□□□ -0.66
RAPGEF4-211ENST00000484331 ZNF692Q9BU19 519 aaPredicted RBP10.93□□□□□ -0.66
RAPGEF4-211ENST00000484331 SSUH2Q9Y2M2 353 aa10.92□□□□□ -0.66
RAPGEF4-211ENST00000484331 SPDYE4A6NLX3 237 aa10.88□□□□□ -0.67
RAPGEF4-211ENST00000484331 REM2Q8IYK8 340 aaPredicted RBP10.83□□□□□ -0.68
RAPGEF4-211ENST00000484331 FKBP8Q14318 412 aa10.79□□□□□ -0.68
RAPGEF4-211ENST00000484331 PABPN1Q86U42 306 aaKnown RBP eCLIP10.79□□□□□ -0.68
RAPGEF4-211ENST00000484331 PITPNM1O00562 1244 aa10.72□□□□□ -0.69
RAPGEF4-211ENST00000484331 PROM2Q8N271 834 aa10.72□□□□□ -0.69
RAPGEF4-211ENST00000484331 SPDYE1Q8NFV5 336 aaPredicted RBP10.71□□□□□ -0.69
RAPGEF4-211ENST00000484331 CHRDL2Q6WN34 429 aa10.68□□□□□ -0.7
RAPGEF4-211ENST00000484331 CLEC11AQ9Y240 323 aa10.64□□□□□ -0.71
RAPGEF4-211ENST00000484331 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
RAPGEF4-211ENST00000484331 FXR2P51116 673 aaKnown RBP eCLIP10.54□□□□□ -0.72
RAPGEF4-211ENST00000484331 PRR29P0C7W0 189 aa10.53□□□□□ -0.72
RAPGEF4-211ENST00000484331 PIP4P2Q8N4L2 257 aa10.52□□□□□ -0.73
RAPGEF4-211ENST00000484331 POTEHQ6S545 545 aa10.47□□□□□ -0.73
RAPGEF4-211ENST00000484331 PRKAR2AP13861 404 aaKnown RBP10.44□□□□□ -0.74
RAPGEF4-211ENST00000484331 FBXO3Q9UK99 471 aa10.43□□□□□ -0.74
RAPGEF4-211ENST00000484331 CHADLQ6NUI6 762 aa10.41□□□□□ -0.74
RAPGEF4-211ENST00000484331 CREBZFQ9NS37 354 aa10.4□□□□□ -0.74
RAPGEF4-211ENST00000484331 MIER1Q8N108 512 aa10.32□□□□□ -0.76
RAPGEF4-211ENST00000484331 VASPP50552 380 aaPredicted RBP10.31□□□□□ -0.76
RAPGEF4-211ENST00000484331 FARP1Q9Y4F1 1045 aaPredicted RBP10.3□□□□□ -0.76
RAPGEF4-211ENST00000484331 PLCD3Q8N3E9 789 aa10.29□□□□□ -0.76
RAPGEF4-211ENST00000484331 MNX1P50219 401 aaPredicted RBP10.28□□□□□ -0.76
RAPGEF4-211ENST00000484331 PLEKHG5O94827 1062 aa10.27□□□□□ -0.77
RAPGEF4-211ENST00000484331 NPM1P06748 294 aaKnown RBP eCLIP10.2□□□□□ -0.78
RAPGEF4-211ENST00000484331 ZBTB47Q9UFB7 747 aaPredicted RBP10.2□□□□□ -0.78
RAPGEF4-211ENST00000484331 NISCHQ9Y2I1 1504 aa10.19□□□□□ -0.78
RAPGEF4-211ENST00000484331 HAX1O00165 279 aa10.19□□□□□ -0.78
RAPGEF4-211ENST00000484331 C19orf67A6NJJ6 358 aa10.18□□□□□ -0.78
RAPGEF4-211ENST00000484331 IFNLR1Q8IU57 520 aaPredicted RBP10.15□□□□□ -0.78
RAPGEF4-211ENST00000484331 CD44P16070 742 aaKnown RBP10.13□□□□□ -0.79
RAPGEF4-211ENST00000484331 KLHL34Q8N239 644 aa10.13□□□□□ -0.79
RAPGEF4-211ENST00000484331 EVX2Q03828 476 aa10.12□□□□□ -0.79
RAPGEF4-211ENST00000484331 NUBP1P53384 320 aa10.09□□□□□ -0.79
RAPGEF4-211ENST00000484331 RASEFQ8IZ41 740 aa10.08□□□□□ -0.8
RAPGEF4-211ENST00000484331 PAK3O75914 559 aaPredicted RBP10.06□□□□□ -0.8
RAPGEF4-211ENST00000484331 SPOCK2Q92563 424 aa10.05□□□□□ -0.8
RAPGEF4-211ENST00000484331 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
RAPGEF4-211ENST00000484331 SP7Q8TDD2 431 aaPredicted RBP10.03□□□□□ -0.8
RAPGEF4-211ENST00000484331 TSPYL2Q9H2G4 693 aaPredicted RBP10.03□□□□□ -0.8
RAPGEF4-211ENST00000484331 ZNF579Q8NAF0 562 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms