RNA–Protein interactions for RNA: ENST00000484303.5

GTDC1-217, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 3

Gene GTDC1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-217ENST00000484303 AEBP2Q6ZN18 517 aaPredicted RBP26.04■■□□□ 1.76
GTDC1-217ENST00000484303 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
GTDC1-217ENST00000484303 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
GTDC1-217ENST00000484303 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
GTDC1-217ENST00000484303 FOXD1Q16676 465 aa20.6■□□□□ 0.89
GTDC1-217ENST00000484303 PLPPR3Q6T4P5 718 aa20.09■□□□□ 0.81
GTDC1-217ENST00000484303 PPP6R1Q9UPN7 881 aa19.51■□□□□ 0.71
GTDC1-217ENST00000484303 ADRA2BP18089 450 aa19.44■□□□□ 0.7
GTDC1-217ENST00000484303 PIAS4Q8N2W9 510 aaPredicted RBP19.29■□□□□ 0.68
GTDC1-217ENST00000484303 MSH5O43196 834 aa19.15■□□□□ 0.66
GTDC1-217ENST00000484303 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
GTDC1-217ENST00000484303 MAPK8IP2Q13387 824 aaPredicted RBP17.76■□□□□ 0.43
GTDC1-217ENST00000484303 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
GTDC1-217ENST00000484303 PPP4R3CPQ6ZMV5 832 aa17.65■□□□□ 0.42
GTDC1-217ENST00000484303 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
GTDC1-217ENST00000484303 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
GTDC1-217ENST00000484303 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
GTDC1-217ENST00000484303 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
GTDC1-217ENST00000484303 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
GTDC1-217ENST00000484303 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
GTDC1-217ENST00000484303 DCAF8L1A6NGE4 600 aa16.78■□□□□ 0.28
GTDC1-217ENST00000484303 KCNA4P22459 653 aa16.77■□□□□ 0.28
GTDC1-217ENST00000484303 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
GTDC1-217ENST00000484303 RNF39Q9H2S5 420 aa16.39■□□□□ 0.21
GTDC1-217ENST00000484303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.19
GTDC1-217ENST00000484303 CACNB1Q02641 598 aaPredicted RBP16.2■□□□□ 0.18
GTDC1-217ENST00000484303 C1QBPQ07021 282 aaKnown RBP16.15■□□□□ 0.18
GTDC1-217ENST00000484303 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
GTDC1-217ENST00000484303 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
GTDC1-217ENST00000484303 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
GTDC1-217ENST00000484303 SPINK5Q9NQ38 1064 aaPredicted RBP15.63■□□□□ 0.09
GTDC1-217ENST00000484303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.58■□□□□ 0.08
GTDC1-217ENST00000484303 HNRNPUL2Q1KMD3 747 aaKnown RBP15.58■□□□□ 0.08
GTDC1-217ENST00000484303 CAPN15O75808 1086 aa15.54■□□□□ 0.08
GTDC1-217ENST00000484303 MYCNP04198 464 aaPredicted RBP15.54■□□□□ 0.08
GTDC1-217ENST00000484303 FOXD4L1Q9NU39 408 aa15.54■□□□□ 0.08
GTDC1-217ENST00000484303 SAMD1Q6SPF0 538 aaPredicted RBP15.51■□□□□ 0.07
GTDC1-217ENST00000484303 APLP2Q06481 763 aa15.5■□□□□ 0.07
GTDC1-217ENST00000484303 ZBTB22O15209 634 aa15.45■□□□□ 0.06
GTDC1-217ENST00000484303 DSG3P32926 999 aa15.45■□□□□ 0.06
GTDC1-217ENST00000484303 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
GTDC1-217ENST00000484303 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
GTDC1-217ENST00000484303 ABCB7O75027 752 aa15.22■□□□□ 0.03
GTDC1-217ENST00000484303 ATF5Q9Y2D1 282 aaPredicted RBP15.18■□□□□ 0.02
GTDC1-217ENST00000484303 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
GTDC1-217ENST00000484303 POLA2Q14181 598 aa15.05■□□□□ -0
GTDC1-217ENST00000484303 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
GTDC1-217ENST00000484303 EHMT2Q96KQ7 1210 aa14.9□□□□□ -0.02
GTDC1-217ENST00000484303 ZBTB12Q9Y330 459 aaPredicted RBP14.77□□□□□ -0.05
GTDC1-217ENST00000484303 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
GTDC1-217ENST00000484303 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
GTDC1-217ENST00000484303 FBLN2P98095 1184 aa14.51□□□□□ -0.09
GTDC1-217ENST00000484303 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
GTDC1-217ENST00000484303 AKT1S1Q96B36 256 aa14.44□□□□□ -0.1
GTDC1-217ENST00000484303 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
GTDC1-217ENST00000484303 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
GTDC1-217ENST00000484303 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
GTDC1-217ENST00000484303 REM2Q8IYK8 340 aaPredicted RBP14.31□□□□□ -0.12
GTDC1-217ENST00000484303 POTEHQ6S545 545 aa14.3□□□□□ -0.12
GTDC1-217ENST00000484303 CHRDL2Q6WN34 429 aa14.27□□□□□ -0.13
GTDC1-217ENST00000484303 SSUH2Q9Y2M2 353 aa14.23□□□□□ -0.13
GTDC1-217ENST00000484303 ZNF692Q9BU19 519 aaPredicted RBP14.2□□□□□ -0.14
GTDC1-217ENST00000484303 PITPNM1O00562 1244 aa14.15□□□□□ -0.14
GTDC1-217ENST00000484303 PABPN1Q86U42 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
GTDC1-217ENST00000484303 SPDYE1Q8NFV5 336 aaPredicted RBP14.01□□□□□ -0.17
GTDC1-217ENST00000484303 PIP4P2Q8N4L2 257 aa14□□□□□ -0.17
GTDC1-217ENST00000484303 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.17
GTDC1-217ENST00000484303 SPDYE4A6NLX3 237 aa13.94□□□□□ -0.18
GTDC1-217ENST00000484303 CLEC11AQ9Y240 323 aa13.93□□□□□ -0.18
GTDC1-217ENST00000484303 PRR29P0C7W0 189 aa13.77□□□□□ -0.21
GTDC1-217ENST00000484303 PRKAR2AP13861 404 aaKnown RBP13.76□□□□□ -0.21
GTDC1-217ENST00000484303 PROM2Q8N271 834 aa13.73□□□□□ -0.21
GTDC1-217ENST00000484303 STAG3Q9UJ98 1225 aa13.68□□□□□ -0.22
GTDC1-217ENST00000484303 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
GTDC1-217ENST00000484303 HAX1O00165 279 aa13.62□□□□□ -0.23
GTDC1-217ENST00000484303 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
GTDC1-217ENST00000484303 CREBZFQ9NS37 354 aa13.55□□□□□ -0.24
GTDC1-217ENST00000484303 FKBP8Q14318 412 aa13.54□□□□□ -0.24
GTDC1-217ENST00000484303 C19orf67A6NJJ6 358 aa13.53□□□□□ -0.24
GTDC1-217ENST00000484303 EVX2Q03828 476 aa13.53□□□□□ -0.24
GTDC1-217ENST00000484303 FARP1Q9Y4F1 1045 aaPredicted RBP13.52□□□□□ -0.25
GTDC1-217ENST00000484303 MNX1P50219 401 aaPredicted RBP13.38□□□□□ -0.27
GTDC1-217ENST00000484303 CD44P16070 742 aaKnown RBP13.34□□□□□ -0.27
GTDC1-217ENST00000484303 NPM1P06748 294 aaKnown RBP eCLIP13.26□□□□□ -0.29
GTDC1-217ENST00000484303 GABBR2O75899 941 aa13.23□□□□□ -0.29
GTDC1-217ENST00000484303 MIER1Q8N108 512 aa13.23□□□□□ -0.29
GTDC1-217ENST00000484303 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
GTDC1-217ENST00000484303 ZRANB1Q9UGI0 708 aa13.19□□□□□ -0.3
GTDC1-217ENST00000484303 PLEKHG5O94827 1062 aa13.17□□□□□ -0.3
GTDC1-217ENST00000484303 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
GTDC1-217ENST00000484303 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
GTDC1-217ENST00000484303 CLCN6P51797 869 aa13.13□□□□□ -0.31
GTDC1-217ENST00000484303 PAK3O75914 559 aaPredicted RBP13.12□□□□□ -0.31
GTDC1-217ENST00000484303 PHF12Q96QT6 1004 aa13.06□□□□□ -0.32
GTDC1-217ENST00000484303 ZBTB47Q9UFB7 747 aaPredicted RBP13.06□□□□□ -0.32
GTDC1-217ENST00000484303 VASPP50552 380 aaPredicted RBP13.03□□□□□ -0.32
GTDC1-217ENST00000484303 RASEFQ8IZ41 740 aa13.03□□□□□ -0.32
GTDC1-217ENST00000484303 TSPYL2Q9H2G4 693 aaPredicted RBP13.02□□□□□ -0.33
GTDC1-217ENST00000484303 CCDC61Q9Y6R9 512 aa13.01□□□□□ -0.33
GTDC1-217ENST00000484303 NUBP1P53384 320 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms