RNA–Protein interactions for RNA: ENST00000484257.1

RNFT1-205, Transcript of ring finger protein, transmembrane 1, humanhuman

TSL 5

Gene RNFT1, Length 618 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1-205ENST00000484257 AEBP2Q6ZN18 517 aaPredicted RBP24.74■■□□□ 1.55
RNFT1-205ENST00000484257 CHIC1Q5VXU3 224 aa23.95■■□□□ 1.42
RNFT1-205ENST00000484257 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
RNFT1-205ENST00000484257 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
RNFT1-205ENST00000484257 FOXD1Q16676 465 aa19.64■□□□□ 0.73
RNFT1-205ENST00000484257 PLPPR3Q6T4P5 718 aa19.4■□□□□ 0.7
RNFT1-205ENST00000484257 ADRA2BP18089 450 aa18.62■□□□□ 0.57
RNFT1-205ENST00000484257 PIAS4Q8N2W9 510 aaPredicted RBP18.58■□□□□ 0.56
RNFT1-205ENST00000484257 PPP6R1Q9UPN7 881 aa18.57■□□□□ 0.56
RNFT1-205ENST00000484257 MSH5O43196 834 aa18.4■□□□□ 0.54
RNFT1-205ENST00000484257 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
RNFT1-205ENST00000484257 POTEDQ86YR6 584 aa17.22■□□□□ 0.35
RNFT1-205ENST00000484257 PPP4R3CPQ6ZMV5 832 aa17.01■□□□□ 0.31
RNFT1-205ENST00000484257 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
RNFT1-205ENST00000484257 DMRT2Q9Y5R5 561 aa16.84■□□□□ 0.29
RNFT1-205ENST00000484257 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
RNFT1-205ENST00000484257 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
RNFT1-205ENST00000484257 RNF216Q9NWF9 866 aaPredicted RBP16.37■□□□□ 0.21
RNFT1-205ENST00000484257 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
RNFT1-205ENST00000484257 HOXD11P31277 338 aaPredicted RBP16.32■□□□□ 0.2
RNFT1-205ENST00000484257 NPM3O75607 178 aaKnown RBP16.18■□□□□ 0.18
RNFT1-205ENST00000484257 KCNA4P22459 653 aa16.18■□□□□ 0.18
RNFT1-205ENST00000484257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.74■□□□□ 0.11
RNFT1-205ENST00000484257 DNAJC5BQ9UF47 199 aa15.71■□□□□ 0.11
RNFT1-205ENST00000484257 RNF39Q9H2S5 420 aa15.61■□□□□ 0.09
RNFT1-205ENST00000484257 CACNB1Q02641 598 aaPredicted RBP15.59■□□□□ 0.09
RNFT1-205ENST00000484257 C1QBPQ07021 282 aaKnown RBP15.49■□□□□ 0.07
RNFT1-205ENST00000484257 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
RNFT1-205ENST00000484257 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
RNFT1-205ENST00000484257 U3KPZ7 1027 aaPredicted RBP15.28■□□□□ 0.04
RNFT1-205ENST00000484257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.18■□□□□ 0.02
RNFT1-205ENST00000484257 HNRNPUL2Q1KMD3 747 aaKnown RBP15.18■□□□□ 0.02
RNFT1-205ENST00000484257 APLP2Q06481 763 aa15.16■□□□□ 0.02
RNFT1-205ENST00000484257 CAPN15O75808 1086 aa15.08■□□□□ 0
RNFT1-205ENST00000484257 FOXD4L1Q9NU39 408 aa15.08■□□□□ 0
RNFT1-205ENST00000484257 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
RNFT1-205ENST00000484257 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
RNFT1-205ENST00000484257 SPINK5Q9NQ38 1064 aaPredicted RBP14.96□□□□□ -0.01
RNFT1-205ENST00000484257 TRHP20396 242 aaPredicted RBP14.9□□□□□ -0.02
RNFT1-205ENST00000484257 ZNF219Q9P2Y4 722 aaPredicted RBP14.9□□□□□ -0.02
RNFT1-205ENST00000484257 ZBTB22O15209 634 aa14.79□□□□□ -0.04
RNFT1-205ENST00000484257 DSG3P32926 999 aa14.75□□□□□ -0.05
RNFT1-205ENST00000484257 ABCB7O75027 752 aa14.7□□□□□ -0.06
RNFT1-205ENST00000484257 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
RNFT1-205ENST00000484257 ATXN8OSP0DMR3 200 aa14.56□□□□□ -0.08
RNFT1-205ENST00000484257 POLA2Q14181 598 aa14.52□□□□□ -0.09
RNFT1-205ENST00000484257 ATF5Q9Y2D1 282 aaPredicted RBP14.51□□□□□ -0.09
RNFT1-205ENST00000484257 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
RNFT1-205ENST00000484257 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
RNFT1-205ENST00000484257 RBM42Q9BTD8 480 aaKnown RBP14.23□□□□□ -0.13
RNFT1-205ENST00000484257 FBLN2P98095 1184 aa14.19□□□□□ -0.14
RNFT1-205ENST00000484257 OSCARQ8IYS5 282 aa14.04□□□□□ -0.16
RNFT1-205ENST00000484257 AKT1S1Q96B36 256 aa13.9□□□□□ -0.18
RNFT1-205ENST00000484257 SPDYE2BA6NHP3 402 aa13.88□□□□□ -0.19
RNFT1-205ENST00000484257 SPDYE6P0CI01 402 aa13.88□□□□□ -0.19
RNFT1-205ENST00000484257 SPDYE2Q495Y8 402 aa13.88□□□□□ -0.19
RNFT1-205ENST00000484257 MKRN4PQ13434 485 aaPredicted RBP13.86□□□□□ -0.19
RNFT1-205ENST00000484257 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
RNFT1-205ENST00000484257 REM2Q8IYK8 340 aaPredicted RBP13.73□□□□□ -0.21
RNFT1-205ENST00000484257 CHRDL2Q6WN34 429 aa13.69□□□□□ -0.22
RNFT1-205ENST00000484257 POTEHQ6S545 545 aa13.63□□□□□ -0.23
RNFT1-205ENST00000484257 SSUH2Q9Y2M2 353 aa13.63□□□□□ -0.23
RNFT1-205ENST00000484257 SPDYE1Q8NFV5 336 aaPredicted RBP13.59□□□□□ -0.23
RNFT1-205ENST00000484257 CLEC11AQ9Y240 323 aa13.58□□□□□ -0.24
RNFT1-205ENST00000484257 PITPNM1O00562 1244 aa13.57□□□□□ -0.24
RNFT1-205ENST00000484257 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
RNFT1-205ENST00000484257 SPDYE4A6NLX3 237 aa13.56□□□□□ -0.24
RNFT1-205ENST00000484257 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
RNFT1-205ENST00000484257 PIP4P2Q8N4L2 257 aa13.39□□□□□ -0.27
RNFT1-205ENST00000484257 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
RNFT1-205ENST00000484257 FXR2P51116 673 aaKnown RBP eCLIP13.35□□□□□ -0.27
RNFT1-205ENST00000484257 PRKAR2AP13861 404 aaKnown RBP13.29□□□□□ -0.28
RNFT1-205ENST00000484257 FKBP8Q14318 412 aa13.25□□□□□ -0.29
RNFT1-205ENST00000484257 HAX1O00165 279 aa13.17□□□□□ -0.3
RNFT1-205ENST00000484257 CHADLQ6NUI6 762 aa13.17□□□□□ -0.3
RNFT1-205ENST00000484257 PROM2Q8N271 834 aa13.1□□□□□ -0.31
RNFT1-205ENST00000484257 PLEKHG5O94827 1062 aa13.07□□□□□ -0.32
RNFT1-205ENST00000484257 FARP1Q9Y4F1 1045 aaPredicted RBP13.03□□□□□ -0.32
RNFT1-205ENST00000484257 CREBZFQ9NS37 354 aa12.99□□□□□ -0.33
RNFT1-205ENST00000484257 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.33
RNFT1-205ENST00000484257 FBXO3Q9UK99 471 aa12.96□□□□□ -0.33
RNFT1-205ENST00000484257 MIER1Q8N108 512 aa12.95□□□□□ -0.34
RNFT1-205ENST00000484257 SP7Q8TDD2 431 aaPredicted RBP12.95□□□□□ -0.34
RNFT1-205ENST00000484257 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
RNFT1-205ENST00000484257 C19orf67A6NJJ6 358 aa12.91□□□□□ -0.34
RNFT1-205ENST00000484257 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.34
RNFT1-205ENST00000484257 CD44P16070 742 aaKnown RBP12.9□□□□□ -0.34
RNFT1-205ENST00000484257 ZBTB47Q9UFB7 747 aaPredicted RBP12.85□□□□□ -0.35
RNFT1-205ENST00000484257 EVX2Q03828 476 aa12.81□□□□□ -0.36
RNFT1-205ENST00000484257 ZRANB1Q9UGI0 708 aa12.79□□□□□ -0.36
RNFT1-205ENST00000484257 MNX1P50219 401 aaPredicted RBP12.74□□□□□ -0.37
RNFT1-205ENST00000484257 CLCN6P51797 869 aa12.7□□□□□ -0.38
RNFT1-205ENST00000484257 VASPP50552 380 aaPredicted RBP12.69□□□□□ -0.38
RNFT1-205ENST00000484257 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
RNFT1-205ENST00000484257 TSPYL2Q9H2G4 693 aaPredicted RBP12.67□□□□□ -0.38
RNFT1-205ENST00000484257 GABBR2O75899 941 aa12.66□□□□□ -0.38
RNFT1-205ENST00000484257 ZNF579Q8NAF0 562 aaKnown RBP12.66□□□□□ -0.38
RNFT1-205ENST00000484257 FAM212AQ96EL1 285 aa12.58□□□□□ -0.4
RNFT1-205ENST00000484257 PHF12Q96QT6 1004 aa12.57□□□□□ -0.4
RNFT1-205ENST00000484257 RASEFQ8IZ41 740 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms