RNA–Protein interactions for RNA: ENST00000484165.1

ACTR3-206, Transcript of ARP3 actin related protein 3 homolog, humanhuman

TSL 2

Gene ACTR3, Length 676 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-206ENST00000484165 AEBP2Q6ZN18 517 aaPredicted RBP27.94■■■□□ 2.06
ACTR3-206ENST00000484165 CHIC1Q5VXU3 224 aa26.11■■□□□ 1.77
ACTR3-206ENST00000484165 SENP3Q9H4L4 574 aaPredicted RBP23.9■■□□□ 1.42
ACTR3-206ENST00000484165 PHF23Q9BUL5 403 aaPredicted RBP23.55■■□□□ 1.36
ACTR3-206ENST00000484165 FOXD1Q16676 465 aa22.35■■□□□ 1.17
ACTR3-206ENST00000484165 POTEDQ86YR6 584 aa21.41■■□□□ 1.02
ACTR3-206ENST00000484165 MSH5O43196 834 aa21.09■□□□□ 0.97
ACTR3-206ENST00000484165 PIAS4Q8N2W9 510 aaPredicted RBP20.78■□□□□ 0.92
ACTR3-206ENST00000484165 PLPPR3Q6T4P5 718 aa20.61■□□□□ 0.89
ACTR3-206ENST00000484165 PPP6R1Q9UPN7 881 aa20.55■□□□□ 0.88
ACTR3-206ENST00000484165 ADRA2BP18089 450 aa20.46■□□□□ 0.87
ACTR3-206ENST00000484165 MAPK8IP2Q13387 824 aaPredicted RBP18.95■□□□□ 0.62
ACTR3-206ENST00000484165 DMRT2Q9Y5R5 561 aa18.87■□□□□ 0.61
ACTR3-206ENST00000484165 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
ACTR3-206ENST00000484165 CACNB1Q02641 598 aaPredicted RBP18.43■□□□□ 0.54
ACTR3-206ENST00000484165 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
ACTR3-206ENST00000484165 PPP4R3CPQ6ZMV5 832 aa18.02■□□□□ 0.48
ACTR3-206ENST00000484165 HOXD11P31277 338 aaPredicted RBP17.99■□□□□ 0.47
ACTR3-206ENST00000484165 RNF39Q9H2S5 420 aa17.95■□□□□ 0.46
ACTR3-206ENST00000484165 CNKSR2Q8WXI2 1034 aa17.78■□□□□ 0.44
ACTR3-206ENST00000484165 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
ACTR3-206ENST00000484165 C1QBPQ07021 282 aaKnown RBP17.66■□□□□ 0.42
ACTR3-206ENST00000484165 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
ACTR3-206ENST00000484165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.34
ACTR3-206ENST00000484165 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
ACTR3-206ENST00000484165 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
ACTR3-206ENST00000484165 U3KPZ7 1027 aaPredicted RBP16.74■□□□□ 0.27
ACTR3-206ENST00000484165 POTEHQ6S545 545 aa16.69■□□□□ 0.26
ACTR3-206ENST00000484165 CAPN15O75808 1086 aa16.67■□□□□ 0.26
ACTR3-206ENST00000484165 DSG3P32926 999 aa16.66■□□□□ 0.26
ACTR3-206ENST00000484165 SPINK5Q9NQ38 1064 aaPredicted RBP16.66■□□□□ 0.26
ACTR3-206ENST00000484165 KCNA4P22459 653 aa16.4■□□□□ 0.22
ACTR3-206ENST00000484165 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
ACTR3-206ENST00000484165 SLC4A2P04920 1241 aa16.29■□□□□ 0.2
ACTR3-206ENST00000484165 ABCB7O75027 752 aa16.25■□□□□ 0.19
ACTR3-206ENST00000484165 APLP2Q06481 763 aa16.22■□□□□ 0.19
ACTR3-206ENST00000484165 ZNF219Q9P2Y4 722 aaPredicted RBP16.21■□□□□ 0.19
ACTR3-206ENST00000484165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.1■□□□□ 0.17
ACTR3-206ENST00000484165 HNRNPUL2Q1KMD3 747 aaKnown RBP16.1■□□□□ 0.17
ACTR3-206ENST00000484165 SAMD1Q6SPF0 538 aaPredicted RBP15.98■□□□□ 0.15
ACTR3-206ENST00000484165 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
ACTR3-206ENST00000484165 CHRDL2Q6WN34 429 aa15.76■□□□□ 0.11
ACTR3-206ENST00000484165 POLA2Q14181 598 aa15.74■□□□□ 0.11
ACTR3-206ENST00000484165 MYCNP04198 464 aaPredicted RBP15.66■□□□□ 0.1
ACTR3-206ENST00000484165 SLC4A1APQ9BWU0 796 aaKnown RBP15.6■□□□□ 0.09
ACTR3-206ENST00000484165 AKT1S1Q96B36 256 aa15.43■□□□□ 0.06
ACTR3-206ENST00000484165 SP7Q8TDD2 431 aaPredicted RBP15.42■□□□□ 0.06
ACTR3-206ENST00000484165 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
ACTR3-206ENST00000484165 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
ACTR3-206ENST00000484165 ZBTB12Q9Y330 459 aaPredicted RBP15.35■□□□□ 0.05
ACTR3-206ENST00000484165 REM2Q8IYK8 340 aaPredicted RBP15.31■□□□□ 0.04
ACTR3-206ENST00000484165 PIP4P2Q8N4L2 257 aa15.28■□□□□ 0.04
ACTR3-206ENST00000484165 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
ACTR3-206ENST00000484165 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
ACTR3-206ENST00000484165 HAX1O00165 279 aa15.17■□□□□ 0.02
ACTR3-206ENST00000484165 PITPNM1O00562 1244 aa15.15■□□□□ 0.02
ACTR3-206ENST00000484165 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
ACTR3-206ENST00000484165 ZBTB22O15209 634 aa15.13■□□□□ 0.01
ACTR3-206ENST00000484165 FXR2P51116 673 aaKnown RBP eCLIP15.1■□□□□ 0.019e-7■■■□□ 19.1
ACTR3-206ENST00000484165 EVX2Q03828 476 aa14.92□□□□□ -0.02
ACTR3-206ENST00000484165 SPDYE2BA6NHP3 402 aa14.84□□□□□ -0.03
ACTR3-206ENST00000484165 SPDYE6P0CI01 402 aa14.84□□□□□ -0.03
ACTR3-206ENST00000484165 SPDYE2Q495Y8 402 aa14.84□□□□□ -0.03
ACTR3-206ENST00000484165 ATXN8OSP0DMR3 200 aa14.8□□□□□ -0.04
ACTR3-206ENST00000484165 FBLN2P98095 1184 aa14.79□□□□□ -0.04
ACTR3-206ENST00000484165 PRKAR2AP13861 404 aaKnown RBP14.77□□□□□ -0.05
ACTR3-206ENST00000484165 CLEC11AQ9Y240 323 aa14.76□□□□□ -0.05
ACTR3-206ENST00000484165 SPDYE1Q8NFV5 336 aaPredicted RBP14.71□□□□□ -0.05
ACTR3-206ENST00000484165 C19orf67A6NJJ6 358 aa14.63□□□□□ -0.07
ACTR3-206ENST00000484165 ZNF692Q9BU19 519 aaPredicted RBP14.62□□□□□ -0.07
ACTR3-206ENST00000484165 MKRN4PQ13434 485 aaPredicted RBP14.61□□□□□ -0.07
ACTR3-206ENST00000484165 SSUH2Q9Y2M2 353 aa14.57□□□□□ -0.08
ACTR3-206ENST00000484165 GABBR2O75899 941 aa14.55□□□□□ -0.08
ACTR3-206ENST00000484165 CHADLQ6NUI6 762 aa14.5□□□□□ -0.09
ACTR3-206ENST00000484165 LHX8Q68G74 356 aa14.47□□□□□ -0.09
ACTR3-206ENST00000484165 PRR29P0C7W0 189 aa14.42□□□□□ -0.1
ACTR3-206ENST00000484165 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
ACTR3-206ENST00000484165 CD44P16070 742 aaKnown RBP14.26□□□□□ -0.13
ACTR3-206ENST00000484165 POTEIP0CG38 1075 aa14.23□□□□□ -0.13
ACTR3-206ENST00000484165 FARP1Q9Y4F1 1045 aaPredicted RBP14.22□□□□□ -0.13
ACTR3-206ENST00000484165 CLCN6P51797 869 aa14.13□□□□□ -0.15
ACTR3-206ENST00000484165 DCBLD2Q96PD2 775 aa14.08□□□□□ -0.16
ACTR3-206ENST00000484165 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
ACTR3-206ENST00000484165 ZNF579Q8NAF0 562 aaKnown RBP13.99□□□□□ -0.17
ACTR3-206ENST00000484165 PLSCR2Q9NRY7 297 aa13.97□□□□□ -0.17
ACTR3-206ENST00000484165 CREBZFQ9NS37 354 aa13.92□□□□□ -0.18
ACTR3-206ENST00000484165 GALR2O43603 387 aaPredicted RBP13.89□□□□□ -0.19
ACTR3-206ENST00000484165 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
ACTR3-206ENST00000484165 OTUD5Q96G74 571 aa13.81□□□□□ -0.2
ACTR3-206ENST00000484165 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
ACTR3-206ENST00000484165 POTEB2H3BUK9 544 aa13.77□□□□□ -0.21
ACTR3-206ENST00000484165 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
ACTR3-206ENST00000484165 SPDYE4A6NLX3 237 aa13.7□□□□□ -0.22
ACTR3-206ENST00000484165 NPM1P06748 294 aaKnown RBP eCLIP13.66□□□□□ -0.22
ACTR3-206ENST00000484165 FKBP8Q14318 412 aa13.66□□□□□ -0.22
ACTR3-206ENST00000484165 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
ACTR3-206ENST00000484165 POTEMA6NI47 508 aa13.65□□□□□ -0.22
ACTR3-206ENST00000484165 MNX1P50219 401 aaPredicted RBP13.61□□□□□ -0.23
ACTR3-206ENST00000484165 POTEGQ6S5H5 508 aa13.6□□□□□ -0.23
ACTR3-206ENST00000484165 MS4A3Q96HJ5 214 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms