RNA–Protein interactions for RNA: ENST00000483950.1

CHM-203, Transcript of CHM, Rab escort protein 1, humanhuman

TSL 3

Gene CHM, Length 678 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHM-203ENST00000483950 AEBP2Q6ZN18 517 aaPredicted RBP29.67■■■□□ 2.34
CHM-203ENST00000483950 CHIC1Q5VXU3 224 aa28.26■■■□□ 2.11
CHM-203ENST00000483950 SENP3Q9H4L4 574 aaPredicted RBP25.43■■□□□ 1.66
CHM-203ENST00000483950 PHF23Q9BUL5 403 aaPredicted RBP25.03■■□□□ 1.6
CHM-203ENST00000483950 FOXD1Q16676 465 aa23.6■■□□□ 1.37
CHM-203ENST00000483950 PLPPR3Q6T4P5 718 aa22.64■■□□□ 1.21
CHM-203ENST00000483950 MSH5O43196 834 aa22.21■■□□□ 1.15
CHM-203ENST00000483950 PIAS4Q8N2W9 510 aaPredicted RBP22.1■■□□□ 1.13
CHM-203ENST00000483950 PPP6R1Q9UPN7 881 aa22.03■■□□□ 1.12
CHM-203ENST00000483950 ADRA2BP18089 450 aa21.97■■□□□ 1.11
CHM-203ENST00000483950 POTEDQ86YR6 584 aa21.63■■□□□ 1.05
CHM-203ENST00000483950 SCAF1Q9H7N4 1312 aaKnown RBP20.28■□□□□ 0.84
CHM-203ENST00000483950 MAPK8IP2Q13387 824 aaPredicted RBP20.17■□□□□ 0.82
CHM-203ENST00000483950 DMRT2Q9Y5R5 561 aa20.13■□□□□ 0.81
CHM-203ENST00000483950 PPP4R3CPQ6ZMV5 832 aa19.79■□□□□ 0.76
CHM-203ENST00000483950 CNKSR2Q8WXI2 1034 aa19.47■□□□□ 0.71
CHM-203ENST00000483950 HOXD11P31277 338 aaPredicted RBP19.41■□□□□ 0.7
CHM-203ENST00000483950 DCAF8L1A6NGE4 600 aa19.29■□□□□ 0.68
CHM-203ENST00000483950 RNF216Q9NWF9 866 aaPredicted RBP19.29■□□□□ 0.68
CHM-203ENST00000483950 NCBP3Q53F19 620 aaKnown RBP19.14■□□□□ 0.65
CHM-203ENST00000483950 CACNB1Q02641 598 aaPredicted RBP18.99■□□□□ 0.63
CHM-203ENST00000483950 RNF39Q9H2S5 420 aa18.88■□□□□ 0.61
CHM-203ENST00000483950 DNAJC5BQ9UF47 199 aa18.83■□□□□ 0.6
CHM-203ENST00000483950 NPM3O75607 178 aaKnown RBP18.74■□□□□ 0.59
CHM-203ENST00000483950 C1QBPQ07021 282 aaKnown RBP18.67■□□□□ 0.58
CHM-203ENST00000483950 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.55
CHM-203ENST00000483950 KCNA4P22459 653 aa18.36■□□□□ 0.53
CHM-203ENST00000483950 U3KPZ7 1027 aaPredicted RBP18.06■□□□□ 0.48
CHM-203ENST00000483950 SLC4A2P04920 1241 aa17.86■□□□□ 0.45
CHM-203ENST00000483950 CAPN15O75808 1086 aa17.8■□□□□ 0.44
CHM-203ENST00000483950 SPINK5Q9NQ38 1064 aaPredicted RBP17.76■□□□□ 0.43
CHM-203ENST00000483950 APLP2Q06481 763 aa17.75■□□□□ 0.43
CHM-203ENST00000483950 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.71■□□□□ 0.43
CHM-203ENST00000483950 HNRNPUL2Q1KMD3 747 aaKnown RBP17.71■□□□□ 0.43
CHM-203ENST00000483950 DSG3P32926 999 aa17.67■□□□□ 0.42
CHM-203ENST00000483950 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
CHM-203ENST00000483950 ZNF219Q9P2Y4 722 aaPredicted RBP17.56■□□□□ 0.4
CHM-203ENST00000483950 TRHP20396 242 aaPredicted RBP17.49■□□□□ 0.39
CHM-203ENST00000483950 MYCNP04198 464 aaPredicted RBP17.41■□□□□ 0.38
CHM-203ENST00000483950 SLC4A1APQ9BWU0 796 aaKnown RBP17.4■□□□□ 0.38
CHM-203ENST00000483950 ABCB7O75027 752 aa17.33■□□□□ 0.36
CHM-203ENST00000483950 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
CHM-203ENST00000483950 POLA2Q14181 598 aa17.03■□□□□ 0.32
CHM-203ENST00000483950 RBM42Q9BTD8 480 aaKnown RBP16.98■□□□□ 0.31
CHM-203ENST00000483950 POTEHQ6S545 545 aa16.94■□□□□ 0.3
CHM-203ENST00000483950 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
CHM-203ENST00000483950 ZBTB22O15209 634 aa16.83■□□□□ 0.28
CHM-203ENST00000483950 ZBTB12Q9Y330 459 aaPredicted RBP16.83■□□□□ 0.28
CHM-203ENST00000483950 ATXN8OSP0DMR3 200 aa16.74■□□□□ 0.27
CHM-203ENST00000483950 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
CHM-203ENST00000483950 CHRDL2Q6WN34 429 aa16.51■□□□□ 0.23
CHM-203ENST00000483950 OSCARQ8IYS5 282 aa16.47■□□□□ 0.23
CHM-203ENST00000483950 FBLN2P98095 1184 aa16.38■□□□□ 0.21
CHM-203ENST00000483950 REM2Q8IYK8 340 aaPredicted RBP16.33■□□□□ 0.2
CHM-203ENST00000483950 SPDYE2BA6NHP3 402 aa16.25■□□□□ 0.19
CHM-203ENST00000483950 SPDYE6P0CI01 402 aa16.25■□□□□ 0.19
CHM-203ENST00000483950 SPDYE2Q495Y8 402 aa16.25■□□□□ 0.19
CHM-203ENST00000483950 PITPNM1O00562 1244 aa16.15■□□□□ 0.18
CHM-203ENST00000483950 MKRN4PQ13434 485 aaPredicted RBP16.11■□□□□ 0.17
CHM-203ENST00000483950 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
CHM-203ENST00000483950 PIP4P2Q8N4L2 257 aa16.09■□□□□ 0.17
CHM-203ENST00000483950 FXR2P51116 673 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHM-203ENST00000483950 ZNF692Q9BU19 519 aaPredicted RBP16.02■□□□□ 0.16
CHM-203ENST00000483950 SSUH2Q9Y2M2 353 aa15.99■□□□□ 0.15
CHM-203ENST00000483950 SPDYE1Q8NFV5 336 aaPredicted RBP15.96■□□□□ 0.15
CHM-203ENST00000483950 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
CHM-203ENST00000483950 SP7Q8TDD2 431 aaPredicted RBP15.88■□□□□ 0.13
CHM-203ENST00000483950 CLEC11AQ9Y240 323 aa15.87■□□□□ 0.13
CHM-203ENST00000483950 HAX1O00165 279 aa15.83■□□□□ 0.12
CHM-203ENST00000483950 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
CHM-203ENST00000483950 PRKAR2AP13861 404 aaKnown RBP15.75■□□□□ 0.11
CHM-203ENST00000483950 PRR29P0C7W0 189 aa15.65■□□□□ 0.1
CHM-203ENST00000483950 EVX2Q03828 476 aa15.59■□□□□ 0.09
CHM-203ENST00000483950 CHADLQ6NUI6 762 aa15.51■□□□□ 0.07
CHM-203ENST00000483950 C19orf67A6NJJ6 358 aa15.5■□□□□ 0.07
CHM-203ENST00000483950 SPDYE4A6NLX3 237 aa15.44■□□□□ 0.06
CHM-203ENST00000483950 STAG3Q9UJ98 1225 aa15.44■□□□□ 0.06
CHM-203ENST00000483950 FARP1Q9Y4F1 1045 aaPredicted RBP15.35■□□□□ 0.05
CHM-203ENST00000483950 CD44P16070 742 aaKnown RBP15.26■□□□□ 0.03
CHM-203ENST00000483950 GABBR2O75899 941 aa15.25■□□□□ 0.03
CHM-203ENST00000483950 CREBZFQ9NS37 354 aa15.2■□□□□ 0.02
CHM-203ENST00000483950 CLCN6P51797 869 aa15.19■□□□□ 0.02
CHM-203ENST00000483950 PROM2Q8N271 834 aa15.07■□□□□ 0
CHM-203ENST00000483950 ZNF579Q8NAF0 562 aaKnown RBP15.05■□□□□ -0
CHM-203ENST00000483950 NPM1P06748 294 aaKnown RBP eCLIP15.04■□□□□ -0
CHM-203ENST00000483950 ZRANB1Q9UGI0 708 aa15.04■□□□□ -0
CHM-203ENST00000483950 PAK3O75914 559 aaPredicted RBP15.02■□□□□ -0
CHM-203ENST00000483950 MNX1P50219 401 aaPredicted RBP14.93□□□□□ -0.02
CHM-203ENST00000483950 POTEIP0CG38 1075 aa14.92□□□□□ -0.02
CHM-203ENST00000483950 DCBLD2Q96PD2 775 aa14.91□□□□□ -0.02
CHM-203ENST00000483950 LHX8Q68G74 356 aa14.88□□□□□ -0.03
CHM-203ENST00000483950 PLEKHG5O94827 1062 aa14.84□□□□□ -0.03
CHM-203ENST00000483950 GALR2O43603 387 aaPredicted RBP14.79□□□□□ -0.04
CHM-203ENST00000483950 PHF12Q96QT6 1004 aa14.78□□□□□ -0.04
CHM-203ENST00000483950 MIER1Q8N108 512 aa14.73□□□□□ -0.05
CHM-203ENST00000483950 TSPYL2Q9H2G4 693 aaPredicted RBP14.66□□□□□ -0.06
CHM-203ENST00000483950 FKBP8Q14318 412 aa14.65□□□□□ -0.06
CHM-203ENST00000483950 PLCD3Q8N3E9 789 aa14.64□□□□□ -0.07
CHM-203ENST00000483950 ZBTB47Q9UFB7 747 aaPredicted RBP14.63□□□□□ -0.07
CHM-203ENST00000483950 CCDC61Q9Y6R9 512 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms