RNA–Protein interactions for RNA: ENST00000483507.1

PLS1-209, Transcript of plastin 1, humanhuman

TSL 2

Gene PLS1, Length 749 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS1-209ENST00000483507 AEBP2Q6ZN18 517 aaPredicted RBP28.81■■■□□ 2.2
PLS1-209ENST00000483507 CHIC1Q5VXU3 224 aa28.4■■■□□ 2.14
PLS1-209ENST00000483507 PHF23Q9BUL5 403 aaPredicted RBP24.97■■□□□ 1.59
PLS1-209ENST00000483507 SENP3Q9H4L4 574 aaPredicted RBP24.45■■□□□ 1.5
PLS1-209ENST00000483507 PLPPR3Q6T4P5 718 aa23.19■■□□□ 1.3
PLS1-209ENST00000483507 FOXD1Q16676 465 aa22.63■■□□□ 1.21
PLS1-209ENST00000483507 POTEDQ86YR6 584 aa22.42■■□□□ 1.18
PLS1-209ENST00000483507 ADRA2BP18089 450 aa21.95■■□□□ 1.1
PLS1-209ENST00000483507 PPP6R1Q9UPN7 881 aa21.94■■□□□ 1.1
PLS1-209ENST00000483507 PIAS4Q8N2W9 510 aaPredicted RBP21.42■■□□□ 1.02
PLS1-209ENST00000483507 MSH5O43196 834 aa21.07■□□□□ 0.96
PLS1-209ENST00000483507 PPP4R3CPQ6ZMV5 832 aa20.44■□□□□ 0.86
PLS1-209ENST00000483507 KCNA4P22459 653 aa20.25■□□□□ 0.83
PLS1-209ENST00000483507 SCAF1Q9H7N4 1312 aaKnown RBP20.11■□□□□ 0.81
PLS1-209ENST00000483507 NCBP3Q53F19 620 aaKnown RBP20■□□□□ 0.79
PLS1-209ENST00000483507 CNKSR2Q8WXI2 1034 aa19.83■□□□□ 0.77
PLS1-209ENST00000483507 MAPK8IP2Q13387 824 aaPredicted RBP19.82■□□□□ 0.76
PLS1-209ENST00000483507 NPM3O75607 178 aaKnown RBP19.69■□□□□ 0.74
PLS1-209ENST00000483507 DMRT2Q9Y5R5 561 aa19.55■□□□□ 0.72
PLS1-209ENST00000483507 RNF216Q9NWF9 866 aaPredicted RBP19.38■□□□□ 0.69
PLS1-209ENST00000483507 SLC4A1APQ9BWU0 796 aaKnown RBP19.34■□□□□ 0.69
PLS1-209ENST00000483507 HOXD11P31277 338 aaPredicted RBP19.23■□□□□ 0.67
PLS1-209ENST00000483507 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
PLS1-209ENST00000483507 EHMT2Q96KQ7 1210 aa19.06■□□□□ 0.64
PLS1-209ENST00000483507 CACNB1Q02641 598 aaPredicted RBP18.74■□□□□ 0.59
PLS1-209ENST00000483507 CSRNP3Q8WYN3 585 aa18.71■□□□□ 0.59
PLS1-209ENST00000483507 DCAF8L1A6NGE4 600 aa18.68■□□□□ 0.58
PLS1-209ENST00000483507 ZBTB22O15209 634 aa18.63■□□□□ 0.57
PLS1-209ENST00000483507 FOXD4L1Q9NU39 408 aa18.59■□□□□ 0.57
PLS1-209ENST00000483507 SLC4A2P04920 1241 aa18.52■□□□□ 0.56
PLS1-209ENST00000483507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.33■□□□□ 0.52
PLS1-209ENST00000483507 MYCNP04198 464 aaPredicted RBP18.22■□□□□ 0.51
PLS1-209ENST00000483507 U3KPZ7 1027 aaPredicted RBP18.06■□□□□ 0.48
PLS1-209ENST00000483507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.95■□□□□ 0.46
PLS1-209ENST00000483507 HNRNPUL2Q1KMD3 747 aaKnown RBP17.95■□□□□ 0.46
PLS1-209ENST00000483507 RNF39Q9H2S5 420 aa17.94■□□□□ 0.46
PLS1-209ENST00000483507 ATXN8OSP0DMR3 200 aa17.92■□□□□ 0.46
PLS1-209ENST00000483507 SAMD1Q6SPF0 538 aaPredicted RBP17.89■□□□□ 0.45
PLS1-209ENST00000483507 APLP2Q06481 763 aa17.71■□□□□ 0.43
PLS1-209ENST00000483507 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
PLS1-209ENST00000483507 C1QBPQ07021 282 aaKnown RBP17.64■□□□□ 0.41
PLS1-209ENST00000483507 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
PLS1-209ENST00000483507 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
PLS1-209ENST00000483507 CAPN15O75808 1086 aa17.4■□□□□ 0.38
PLS1-209ENST00000483507 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
PLS1-209ENST00000483507 POTEHQ6S545 545 aa17.34■□□□□ 0.37
PLS1-209ENST00000483507 POLA2Q14181 598 aa17.14■□□□□ 0.33
PLS1-209ENST00000483507 ABCB7O75027 752 aa17.09■□□□□ 0.33
PLS1-209ENST00000483507 DSG3P32926 999 aa17.04■□□□□ 0.32
PLS1-209ENST00000483507 FBLN2P98095 1184 aa16.95■□□□□ 0.3
PLS1-209ENST00000483507 ZBTB12Q9Y330 459 aaPredicted RBP16.94■□□□□ 0.3
PLS1-209ENST00000483507 FKBP8Q14318 412 aa16.93■□□□□ 0.3
PLS1-209ENST00000483507 MKRN4PQ13434 485 aaPredicted RBP16.92■□□□□ 0.3
PLS1-209ENST00000483507 SPDYE4A6NLX3 237 aa16.68■□□□□ 0.26
PLS1-209ENST00000483507 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
PLS1-209ENST00000483507 SPDYE2BA6NHP3 402 aa16.48■□□□□ 0.23
PLS1-209ENST00000483507 SPDYE6P0CI01 402 aa16.48■□□□□ 0.23
PLS1-209ENST00000483507 SPDYE2Q495Y8 402 aa16.48■□□□□ 0.23
PLS1-209ENST00000483507 PROM2Q8N271 834 aa16.45■□□□□ 0.22
PLS1-209ENST00000483507 ZNF692Q9BU19 519 aaPredicted RBP16.43■□□□□ 0.22
PLS1-209ENST00000483507 SSUH2Q9Y2M2 353 aa16.38■□□□□ 0.21
PLS1-209ENST00000483507 RBM42Q9BTD8 480 aaKnown RBP16.28■□□□□ 0.2
PLS1-209ENST00000483507 FBXO3Q9UK99 471 aa16.28■□□□□ 0.2
PLS1-209ENST00000483507 PABPN1Q86U42 306 aaKnown RBP eCLIP16.22■□□□□ 0.19
PLS1-209ENST00000483507 AKT1S1Q96B36 256 aa16.11■□□□□ 0.17
PLS1-209ENST00000483507 VASPP50552 380 aaPredicted RBP16.05■□□□□ 0.16
PLS1-209ENST00000483507 STAG3Q9UJ98 1225 aa16.02■□□□□ 0.16
PLS1-209ENST00000483507 REM2Q8IYK8 340 aaPredicted RBP15.94■□□□□ 0.14
PLS1-209ENST00000483507 SPDYE1Q8NFV5 336 aaPredicted RBP15.93■□□□□ 0.14
PLS1-209ENST00000483507 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
PLS1-209ENST00000483507 IFNLR1Q8IU57 520 aaPredicted RBP15.82■□□□□ 0.12
PLS1-209ENST00000483507 CLEC11AQ9Y240 323 aa15.82■□□□□ 0.12
PLS1-209ENST00000483507 RTN4Q9NQC3 1192 aaKnown RBP15.81■□□□□ 0.12
PLS1-209ENST00000483507 PLCD3Q8N3E9 789 aa15.8■□□□□ 0.12
PLS1-209ENST00000483507 CHRDL2Q6WN34 429 aa15.78■□□□□ 0.12
PLS1-209ENST00000483507 PITPNM1O00562 1244 aa15.77■□□□□ 0.12
PLS1-209ENST00000483507 MIER1Q8N108 512 aa15.77■□□□□ 0.12
PLS1-209ENST00000483507 SP7Q8TDD2 431 aaPredicted RBP15.76■□□□□ 0.11
PLS1-209ENST00000483507 PRR29P0C7W0 189 aa15.72■□□□□ 0.11
PLS1-209ENST00000483507 PLEKHG5O94827 1062 aa15.71■□□□□ 0.11
PLS1-209ENST00000483507 KLHL34Q8N239 644 aa15.69■□□□□ 0.1
PLS1-209ENST00000483507 ZBTB47Q9UFB7 747 aaPredicted RBP15.63■□□□□ 0.09
PLS1-209ENST00000483507 SPOCK2Q92563 424 aa15.61■□□□□ 0.09
PLS1-209ENST00000483507 CREBZFQ9NS37 354 aa15.57■□□□□ 0.08
PLS1-209ENST00000483507 MNX1P50219 401 aaPredicted RBP15.44■□□□□ 0.06
PLS1-209ENST00000483507 FXR2P51116 673 aaKnown RBP eCLIP15.41■□□□□ 0.06
PLS1-209ENST00000483507 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
PLS1-209ENST00000483507 PKD2Q13563 968 aa15.38■□□□□ 0.05
PLS1-209ENST00000483507 PRKAR2AP13861 404 aaKnown RBP15.37■□□□□ 0.05
PLS1-209ENST00000483507 NUBP1P53384 320 aa15.35■□□□□ 0.05
PLS1-209ENST00000483507 NPM1P06748 294 aaKnown RBP eCLIP15.34■□□□□ 0.05
PLS1-209ENST00000483507 PIP4P2Q8N4L2 257 aa15.33■□□□□ 0.04
PLS1-209ENST00000483507 CIZ1Q9ULV3 898 aaPredicted RBP15.31■□□□□ 0.04
PLS1-209ENST00000483507 FARP1Q9Y4F1 1045 aaPredicted RBP15.3■□□□□ 0.04
PLS1-209ENST00000483507 GSE1Q14687 1217 aa15.27■□□□□ 0.04
PLS1-209ENST00000483507 ECM2O94769 699 aaPredicted RBP15.26■□□□□ 0.03
PLS1-209ENST00000483507 FAM212AQ96EL1 285 aa15.26■□□□□ 0.03
PLS1-209ENST00000483507 RASEFQ8IZ41 740 aa15.23■□□□□ 0.03
PLS1-209ENST00000483507 DCAF8Q5TAQ9 597 aa15.21■□□□□ 0.03
PLS1-209ENST00000483507 TRIM41Q8WV44 630 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms