RNA–Protein interactions for RNA: ENST00000483489.1

LRPPRC-209, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 2

Gene LRPPRC, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-209ENST00000483489 AEBP2Q6ZN18 517 aaPredicted RBP22.24■■□□□ 1.15
LRPPRC-209ENST00000483489 CHIC1Q5VXU3 224 aa21.91■■□□□ 1.1
LRPPRC-209ENST00000483489 PHF23Q9BUL5 403 aaPredicted RBP19.33■□□□□ 0.68
LRPPRC-209ENST00000483489 SENP3Q9H4L4 574 aaPredicted RBP18.77■□□□□ 0.6
LRPPRC-209ENST00000483489 PLPPR3Q6T4P5 718 aa17.84■□□□□ 0.45
LRPPRC-209ENST00000483489 FOXD1Q16676 465 aa17.44■□□□□ 0.38
LRPPRC-209ENST00000483489 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
LRPPRC-209ENST00000483489 ADRA2BP18089 450 aa16.93■□□□□ 0.3
LRPPRC-209ENST00000483489 PIAS4Q8N2W9 510 aaPredicted RBP16.43■□□□□ 0.22
LRPPRC-209ENST00000483489 MSH5O43196 834 aa15.95■□□□□ 0.14
LRPPRC-209ENST00000483489 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
LRPPRC-209ENST00000483489 KCNA4P22459 653 aa15.64■□□□□ 0.09
LRPPRC-209ENST00000483489 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
LRPPRC-209ENST00000483489 NCBP3Q53F19 620 aaKnown RBP15.36■□□□□ 0.05
LRPPRC-209ENST00000483489 MAPK8IP2Q13387 824 aaPredicted RBP15.32■□□□□ 0.04
LRPPRC-209ENST00000483489 CNKSR2Q8WXI2 1034 aa15.27■□□□□ 0.04
LRPPRC-209ENST00000483489 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
LRPPRC-209ENST00000483489 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
LRPPRC-209ENST00000483489 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
LRPPRC-209ENST00000483489 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
LRPPRC-209ENST00000483489 HOXD11P31277 338 aaPredicted RBP14.85□□□□□ -0.03
LRPPRC-209ENST00000483489 DNAJC5BQ9UF47 199 aa14.81□□□□□ -0.04
LRPPRC-209ENST00000483489 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
LRPPRC-209ENST00000483489 EHMT2Q96KQ7 1210 aa14.67□□□□□ -0.06
LRPPRC-209ENST00000483489 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
LRPPRC-209ENST00000483489 ZBTB22O15209 634 aa14.42□□□□□ -0.1
LRPPRC-209ENST00000483489 SLC4A2P04920 1241 aa14.33□□□□□ -0.12
LRPPRC-209ENST00000483489 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
LRPPRC-209ENST00000483489 DCAF8L1A6NGE4 600 aa14.27□□□□□ -0.13
LRPPRC-209ENST00000483489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.05□□□□□ -0.16
LRPPRC-209ENST00000483489 MYCNP04198 464 aaPredicted RBP14□□□□□ -0.17
LRPPRC-209ENST00000483489 U3KPZ7 1027 aaPredicted RBP13.92□□□□□ -0.18
LRPPRC-209ENST00000483489 ATXN8OSP0DMR3 200 aa13.82□□□□□ -0.2
LRPPRC-209ENST00000483489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
LRPPRC-209ENST00000483489 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
LRPPRC-209ENST00000483489 RNF39Q9H2S5 420 aa13.73□□□□□ -0.21
LRPPRC-209ENST00000483489 SAMD1Q6SPF0 538 aaPredicted RBP13.72□□□□□ -0.21
LRPPRC-209ENST00000483489 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
LRPPRC-209ENST00000483489 C1QBPQ07021 282 aaKnown RBP13.56□□□□□ -0.24
LRPPRC-209ENST00000483489 APLP2Q06481 763 aa13.53□□□□□ -0.24
LRPPRC-209ENST00000483489 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.25
LRPPRC-209ENST00000483489 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
LRPPRC-209ENST00000483489 CAPN15O75808 1086 aa13.33□□□□□ -0.28
LRPPRC-209ENST00000483489 TRHP20396 242 aaPredicted RBP13.32□□□□□ -0.28
LRPPRC-209ENST00000483489 POLA2Q14181 598 aa13.19□□□□□ -0.3
LRPPRC-209ENST00000483489 CACNB1Q02641 598 aaPredicted RBP13.15□□□□□ -0.3
LRPPRC-209ENST00000483489 DSG3P32926 999 aa13.14□□□□□ -0.31
LRPPRC-209ENST00000483489 ABCB7O75027 752 aa13.11□□□□□ -0.31
LRPPRC-209ENST00000483489 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
LRPPRC-209ENST00000483489 FKBP8Q14318 412 aa13.03□□□□□ -0.32
LRPPRC-209ENST00000483489 FBLN2P98095 1184 aa12.98□□□□□ -0.33
LRPPRC-209ENST00000483489 ZBTB12Q9Y330 459 aaPredicted RBP12.95□□□□□ -0.34
LRPPRC-209ENST00000483489 SPDYE4A6NLX3 237 aa12.83□□□□□ -0.36
LRPPRC-209ENST00000483489 PROM2Q8N271 834 aa12.74□□□□□ -0.37
LRPPRC-209ENST00000483489 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
LRPPRC-209ENST00000483489 SPDYE2BA6NHP3 402 aa12.66□□□□□ -0.38
LRPPRC-209ENST00000483489 SPDYE6P0CI01 402 aa12.66□□□□□ -0.38
LRPPRC-209ENST00000483489 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
LRPPRC-209ENST00000483489 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
LRPPRC-209ENST00000483489 SSUH2Q9Y2M2 353 aa12.62□□□□□ -0.39
LRPPRC-209ENST00000483489 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
LRPPRC-209ENST00000483489 PABPN1Q86U42 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
LRPPRC-209ENST00000483489 RBM42Q9BTD8 480 aaKnown RBP12.45□□□□□ -0.42
LRPPRC-209ENST00000483489 AKT1S1Q96B36 256 aa12.38□□□□□ -0.43
LRPPRC-209ENST00000483489 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
LRPPRC-209ENST00000483489 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
LRPPRC-209ENST00000483489 REM2Q8IYK8 340 aaPredicted RBP12.26□□□□□ -0.45
LRPPRC-209ENST00000483489 AMER1Q5JTC6 1135 aaPredicted RBP12.24□□□□□ -0.45
LRPPRC-209ENST00000483489 RTN4Q9NQC3 1192 aaKnown RBP12.24□□□□□ -0.45
LRPPRC-209ENST00000483489 IFNLR1Q8IU57 520 aaPredicted RBP12.23□□□□□ -0.45
LRPPRC-209ENST00000483489 SPDYE1Q8NFV5 336 aaPredicted RBP12.22□□□□□ -0.45
LRPPRC-209ENST00000483489 MIER1Q8N108 512 aa12.12□□□□□ -0.47
LRPPRC-209ENST00000483489 CLEC11AQ9Y240 323 aa12.12□□□□□ -0.47
LRPPRC-209ENST00000483489 PITPNM1O00562 1244 aa12.11□□□□□ -0.47
LRPPRC-209ENST00000483489 PLCD3Q8N3E9 789 aa12.1□□□□□ -0.47
LRPPRC-209ENST00000483489 PRR29P0C7W0 189 aa12.06□□□□□ -0.48
LRPPRC-209ENST00000483489 KLHL34Q8N239 644 aa12.03□□□□□ -0.48
LRPPRC-209ENST00000483489 CREBZFQ9NS37 354 aa12.02□□□□□ -0.49
LRPPRC-209ENST00000483489 SPOCK2Q92563 424 aa12.01□□□□□ -0.49
LRPPRC-209ENST00000483489 PLEKHG5O94827 1062 aa11.99□□□□□ -0.49
LRPPRC-209ENST00000483489 MNX1P50219 401 aaPredicted RBP11.96□□□□□ -0.49
LRPPRC-209ENST00000483489 ZBTB47Q9UFB7 747 aaPredicted RBP11.96□□□□□ -0.49
LRPPRC-209ENST00000483489 PKD2Q13563 968 aa11.92□□□□□ -0.5
LRPPRC-209ENST00000483489 FXR2P51116 673 aaKnown RBP eCLIP11.88□□□□□ -0.512e-7■■■■□ 19.6
LRPPRC-209ENST00000483489 NUBP1P53384 320 aa11.87□□□□□ -0.51
LRPPRC-209ENST00000483489 CHRDL2Q6WN34 429 aa11.87□□□□□ -0.51
LRPPRC-209ENST00000483489 CHADLQ6NUI6 762 aa11.84□□□□□ -0.51
LRPPRC-209ENST00000483489 PRKAR2AP13861 404 aaKnown RBP11.79□□□□□ -0.52
LRPPRC-209ENST00000483489 PIP4P2Q8N4L2 257 aa11.79□□□□□ -0.52
LRPPRC-209ENST00000483489 FARP1Q9Y4F1 1045 aaPredicted RBP11.77□□□□□ -0.53
LRPPRC-209ENST00000483489 NPM1P06748 294 aaKnown RBP eCLIP11.76□□□□□ -0.53
LRPPRC-209ENST00000483489 CIZ1Q9ULV3 898 aaPredicted RBP11.75□□□□□ -0.53
LRPPRC-209ENST00000483489 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
LRPPRC-209ENST00000483489 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
LRPPRC-209ENST00000483489 GSE1Q14687 1217 aa11.73□□□□□ -0.53
LRPPRC-209ENST00000483489 DCAF8Q5TAQ9 597 aa11.7□□□□□ -0.54
LRPPRC-209ENST00000483489 TRIM41Q8WV44 630 aa11.68□□□□□ -0.54
LRPPRC-209ENST00000483489 FAM212AQ96EL1 285 aa11.68□□□□□ -0.54
LRPPRC-209ENST00000483489 RGL2O15211 777 aa11.66□□□□□ -0.54
LRPPRC-209ENST00000483489 CHRM1P11229 460 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms