RNA–Protein interactions for RNA: ENST00000483422.1

GPC5-202, Transcript of glypican 5, humanhuman

TSL 3

Gene GPC5, Length 390 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-202ENST00000483422 CHIC1Q5VXU3 224 aa14.66□□□□□ -0.06
GPC5-202ENST00000483422 AEBP2Q6ZN18 517 aaPredicted RBP14.34□□□□□ -0.11
GPC5-202ENST00000483422 PHF23Q9BUL5 403 aaPredicted RBP12.79□□□□□ -0.36
GPC5-202ENST00000483422 SENP3Q9H4L4 574 aaPredicted RBP12.38□□□□□ -0.43
GPC5-202ENST00000483422 PLPPR3Q6T4P5 718 aa12.24□□□□□ -0.45
GPC5-202ENST00000483422 FOXD1Q16676 465 aa11.23□□□□□ -0.61
GPC5-202ENST00000483422 ADRA2BP18089 450 aa11.17□□□□□ -0.62
GPC5-202ENST00000483422 PPP6R1Q9UPN7 881 aa11.09□□□□□ -0.63
GPC5-202ENST00000483422 KCNA4P22459 653 aa10.95□□□□□ -0.66
GPC5-202ENST00000483422 PIAS4Q8N2W9 510 aaPredicted RBP10.82□□□□□ -0.68
GPC5-202ENST00000483422 EHMT2Q96KQ7 1210 aa10.81□□□□□ -0.68
GPC5-202ENST00000483422 NCBP3Q53F19 620 aaKnown RBP10.8□□□□□ -0.68
GPC5-202ENST00000483422 PPP4R3CPQ6ZMV5 832 aa10.75□□□□□ -0.69
GPC5-202ENST00000483422 SLC4A1APQ9BWU0 796 aaKnown RBP10.65□□□□□ -0.7
GPC5-202ENST00000483422 SCAF1Q9H7N4 1312 aaKnown RBP10.55□□□□□ -0.72
GPC5-202ENST00000483422 CNKSR2Q8WXI2 1034 aa10.42□□□□□ -0.74
GPC5-202ENST00000483422 CSRNP3Q8WYN3 585 aa10.42□□□□□ -0.74
GPC5-202ENST00000483422 NPM3O75607 178 aaKnown RBP10.41□□□□□ -0.74
GPC5-202ENST00000483422 MSH5O43196 834 aa10.4□□□□□ -0.74
GPC5-202ENST00000483422 POTEDQ86YR6 584 aa10.3□□□□□ -0.76
GPC5-202ENST00000483422 DNAJC5BQ9UF47 199 aa10.18□□□□□ -0.78
GPC5-202ENST00000483422 FOXD4L1Q9NU39 408 aa10.1□□□□□ -0.79
GPC5-202ENST00000483422 RNF216Q9NWF9 866 aaPredicted RBP10.09□□□□□ -0.79
GPC5-202ENST00000483422 ZBTB22O15209 634 aa9.99□□□□□ -0.81
GPC5-202ENST00000483422 MAPK8IP2Q13387 824 aaPredicted RBP9.93□□□□□ -0.82
GPC5-202ENST00000483422 DMRT2Q9Y5R5 561 aa9.88□□□□□ -0.83
GPC5-202ENST00000483422 HOXD11P31277 338 aaPredicted RBP9.87□□□□□ -0.83
GPC5-202ENST00000483422 ATXN8OSP0DMR3 200 aa9.78□□□□□ -0.84
GPC5-202ENST00000483422 MYCNP04198 464 aaPredicted RBP9.75□□□□□ -0.85
GPC5-202ENST00000483422 SLC4A2P04920 1241 aa9.64□□□□□ -0.87
GPC5-202ENST00000483422 AMER1Q5JTC6 1135 aaPredicted RBP9.64□□□□□ -0.87
GPC5-202ENST00000483422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.59□□□□□ -0.87
GPC5-202ENST00000483422 HNRNPUL2Q1KMD3 747 aaKnown RBP9.59□□□□□ -0.87
GPC5-202ENST00000483422 SAMD1Q6SPF0 538 aaPredicted RBP9.5□□□□□ -0.89
GPC5-202ENST00000483422 FKBP8Q14318 412 aa9.48□□□□□ -0.89
GPC5-202ENST00000483422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.47□□□□□ -0.89
GPC5-202ENST00000483422 DCAF8L1A6NGE4 600 aa9.45□□□□□ -0.9
GPC5-202ENST00000483422 APLP2Q06481 763 aa9.44□□□□□ -0.9
GPC5-202ENST00000483422 SLC24A1O60721 1099 aa9.43□□□□□ -0.9
GPC5-202ENST00000483422 RTN4Q9NQC3 1192 aaKnown RBP9.39□□□□□ -0.91
GPC5-202ENST00000483422 U3KPZ7 1027 aaPredicted RBP9.24□□□□□ -0.93
GPC5-202ENST00000483422 FBXO3Q9UK99 471 aa9.21□□□□□ -0.94
GPC5-202ENST00000483422 ATF5Q9Y2D1 282 aaPredicted RBP9.18□□□□□ -0.94
GPC5-202ENST00000483422 ZNF219Q9P2Y4 722 aaPredicted RBP9.17□□□□□ -0.94
GPC5-202ENST00000483422 FBLN2P98095 1184 aa9.1□□□□□ -0.95
GPC5-202ENST00000483422 SPDYE4A6NLX3 237 aa9.05□□□□□ -0.96
GPC5-202ENST00000483422 ZBTB12Q9Y330 459 aaPredicted RBP8.99□□□□□ -0.97
GPC5-202ENST00000483422 PROM2Q8N271 834 aa8.92□□□□□ -0.98
GPC5-202ENST00000483422 TRHP20396 242 aaPredicted RBP8.91□□□□□ -0.98
GPC5-202ENST00000483422 VASPP50552 380 aaPredicted RBP8.91□□□□□ -0.98
GPC5-202ENST00000483422 CAPN15O75808 1086 aa8.88□□□□□ -0.99
GPC5-202ENST00000483422 C1QBPQ07021 282 aaKnown RBP8.87□□□□□ -0.99
GPC5-202ENST00000483422 POLA2Q14181 598 aa8.87□□□□□ -0.99
GPC5-202ENST00000483422 MKRN4PQ13434 485 aaPredicted RBP8.85□□□□□ -0.99
GPC5-202ENST00000483422 RNF39Q9H2S5 420 aa8.82□□□□□ -1
GPC5-202ENST00000483422 PLCB2Q00722 1185 aa8.79□□□□□ -1
GPC5-202ENST00000483422 DCAF8L2P0C7V8 631 aa8.78□□□□□ -1
GPC5-202ENST00000483422 SPINK5Q9NQ38 1064 aaPredicted RBP8.78□□□□□ -1
GPC5-202ENST00000483422 STAG3Q9UJ98 1225 aa8.77□□□□□ -1.01
GPC5-202ENST00000483422 IFNLR1Q8IU57 520 aaPredicted RBP8.73□□□□□ -1.01
GPC5-202ENST00000483422 KLHL34Q8N239 644 aa8.72□□□□□ -1.01
GPC5-202ENST00000483422 SPOCK2Q92563 424 aa8.7□□□□□ -1.02
GPC5-202ENST00000483422 SPDYE2BA6NHP3 402 aa8.69□□□□□ -1.02
GPC5-202ENST00000483422 PLEKHG5O94827 1062 aa8.69□□□□□ -1.02
GPC5-202ENST00000483422 SPDYE6P0CI01 402 aa8.69□□□□□ -1.02
GPC5-202ENST00000483422 SPDYE2Q495Y8 402 aa8.69□□□□□ -1.02
GPC5-202ENST00000483422 ZNF692Q9BU19 519 aaPredicted RBP8.68□□□□□ -1.02
GPC5-202ENST00000483422 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.68□□□□□ -1.02
GPC5-202ENST00000483422 ZBTB47Q9UFB7 747 aaPredicted RBP8.67□□□□□ -1.02
GPC5-202ENST00000483422 HAP1P54257 671 aaPredicted RBP8.66□□□□□ -1.02
GPC5-202ENST00000483422 ABCB7O75027 752 aa8.65□□□□□ -1.02
GPC5-202ENST00000483422 PLCD3Q8N3E9 789 aa8.65□□□□□ -1.02
GPC5-202ENST00000483422 PKD2Q13563 968 aa8.62□□□□□ -1.03
GPC5-202ENST00000483422 VSIG10Q8N0Z9 540 aa8.62□□□□□ -1.03
GPC5-202ENST00000483422 BCANQ96GW7 911 aa8.61□□□□□ -1.03
GPC5-202ENST00000483422 ECM2O94769 699 aaPredicted RBP8.6□□□□□ -1.03
GPC5-202ENST00000483422 BBXQ8WY36 941 aaPredicted RBP8.59□□□□□ -1.03
GPC5-202ENST00000483422 SSUH2Q9Y2M2 353 aa8.57□□□□□ -1.04
GPC5-202ENST00000483422 MIER1Q8N108 512 aa8.56□□□□□ -1.04
GPC5-202ENST00000483422 TRIM41Q8WV44 630 aa8.56□□□□□ -1.04
GPC5-202ENST00000483422 DSG3P32926 999 aa8.54□□□□□ -1.04
GPC5-202ENST00000483422 PABPN1Q86U42 306 aaKnown RBP eCLIP8.52□□□□□ -1.05
GPC5-202ENST00000483422 OSCARQ8IYS5 282 aa8.52□□□□□ -1.05
GPC5-202ENST00000483422 TAOK2Q9UL54 1235 aa8.49□□□□□ -1.05
GPC5-202ENST00000483422 SPRYD3Q8NCJ5 442 aa8.46□□□□□ -1.06
GPC5-202ENST00000483422 PAXIP1Q6ZW49 1069 aaPredicted RBP8.45□□□□□ -1.06
GPC5-202ENST00000483422 CIZ1Q9ULV3 898 aaPredicted RBP8.45□□□□□ -1.06
GPC5-202ENST00000483422 CFAP44Q96MT7 982 aa8.43□□□□□ -1.06
GPC5-202ENST00000483422 GSE1Q14687 1217 aa8.42□□□□□ -1.06
GPC5-202ENST00000483422 RGL2O15211 777 aa8.38□□□□□ -1.07
GPC5-202ENST00000483422 CHGAP10645 457 aaKnown RBP8.36□□□□□ -1.07
GPC5-202ENST00000483422 RBM42Q9BTD8 480 aaKnown RBP8.35□□□□□ -1.07
GPC5-202ENST00000483422 SPDYE1Q8NFV5 336 aaPredicted RBP8.33□□□□□ -1.08
GPC5-202ENST00000483422 NPM1P06748 294 aaKnown RBP eCLIP8.32□□□□□ -1.08
GPC5-202ENST00000483422 HS6ST3Q8IZP7 471 aa8.31□□□□□ -1.08
GPC5-202ENST00000483422 CACNB1Q02641 598 aaPredicted RBP8.3□□□□□ -1.08
GPC5-202ENST00000483422 RYDENQ9NUL5 291 aaKnown RBP8.3□□□□□ -1.08
GPC5-202ENST00000483422 FAM212AQ96EL1 285 aa8.29□□□□□ -1.08
GPC5-202ENST00000483422 DNAJC5Q9H3Z4 198 aa8.28□□□□□ -1.08
GPC5-202ENST00000483422 NBR1Q14596 966 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms