RNA–Protein interactions for RNA: ENST00000483268.1

RHBDD1-212, Transcript of rhomboid domain containing 1, humanhuman

TSL 4

Gene RHBDD1, Length 472 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-212ENST00000483268 AEBP2Q6ZN18 517 aaPredicted RBP29.25■■■□□ 2.27
RHBDD1-212ENST00000483268 CHIC1Q5VXU3 224 aa28.29■■■□□ 2.12
RHBDD1-212ENST00000483268 SENP3Q9H4L4 574 aaPredicted RBP24.94■■□□□ 1.58
RHBDD1-212ENST00000483268 PHF23Q9BUL5 403 aaPredicted RBP24.8■■□□□ 1.56
RHBDD1-212ENST00000483268 FOXD1Q16676 465 aa23.13■■□□□ 1.29
RHBDD1-212ENST00000483268 PLPPR3Q6T4P5 718 aa22.84■■□□□ 1.25
RHBDD1-212ENST00000483268 PPP6R1Q9UPN7 881 aa21.98■■□□□ 1.11
RHBDD1-212ENST00000483268 ADRA2BP18089 450 aa21.92■■□□□ 1.1
RHBDD1-212ENST00000483268 PIAS4Q8N2W9 510 aaPredicted RBP21.72■■□□□ 1.07
RHBDD1-212ENST00000483268 MSH5O43196 834 aa21.56■■□□□ 1.04
RHBDD1-212ENST00000483268 POTEDQ86YR6 584 aa20.83■□□□□ 0.93
RHBDD1-212ENST00000483268 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
RHBDD1-212ENST00000483268 PPP4R3CPQ6ZMV5 832 aa20.05■□□□□ 0.8
RHBDD1-212ENST00000483268 MAPK8IP2Q13387 824 aaPredicted RBP19.98■□□□□ 0.79
RHBDD1-212ENST00000483268 DMRT2Q9Y5R5 561 aa19.85■□□□□ 0.77
RHBDD1-212ENST00000483268 CNKSR2Q8WXI2 1034 aa19.6■□□□□ 0.73
RHBDD1-212ENST00000483268 NCBP3Q53F19 620 aaKnown RBP19.47■□□□□ 0.71
RHBDD1-212ENST00000483268 HOXD11P31277 338 aaPredicted RBP19.33■□□□□ 0.68
RHBDD1-212ENST00000483268 RNF216Q9NWF9 866 aaPredicted RBP19.31■□□□□ 0.68
RHBDD1-212ENST00000483268 KCNA4P22459 653 aa19.17■□□□□ 0.66
RHBDD1-212ENST00000483268 NPM3O75607 178 aaKnown RBP19.13■□□□□ 0.65
RHBDD1-212ENST00000483268 DCAF8L1A6NGE4 600 aa18.9■□□□□ 0.62
RHBDD1-212ENST00000483268 DNAJC5BQ9UF47 199 aa18.79■□□□□ 0.6
RHBDD1-212ENST00000483268 CACNB1Q02641 598 aaPredicted RBP18.44■□□□□ 0.54
RHBDD1-212ENST00000483268 RNF39Q9H2S5 420 aa18.4■□□□□ 0.54
RHBDD1-212ENST00000483268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.35■□□□□ 0.53
RHBDD1-212ENST00000483268 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
RHBDD1-212ENST00000483268 C1QBPQ07021 282 aaKnown RBP18.19■□□□□ 0.5
RHBDD1-212ENST00000483268 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
RHBDD1-212ENST00000483268 U3KPZ7 1027 aaPredicted RBP18.02■□□□□ 0.48
RHBDD1-212ENST00000483268 FOXD4L1Q9NU39 408 aa17.78■□□□□ 0.44
RHBDD1-212ENST00000483268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.76■□□□□ 0.43
RHBDD1-212ENST00000483268 HNRNPUL2Q1KMD3 747 aaKnown RBP17.76■□□□□ 0.43
RHBDD1-212ENST00000483268 MYCNP04198 464 aaPredicted RBP17.72■□□□□ 0.43
RHBDD1-212ENST00000483268 APLP2Q06481 763 aa17.66■□□□□ 0.42
RHBDD1-212ENST00000483268 SAMD1Q6SPF0 538 aaPredicted RBP17.66■□□□□ 0.42
RHBDD1-212ENST00000483268 ZBTB22O15209 634 aa17.63■□□□□ 0.41
RHBDD1-212ENST00000483268 SPINK5Q9NQ38 1064 aaPredicted RBP17.59■□□□□ 0.41
RHBDD1-212ENST00000483268 CAPN15O75808 1086 aa17.53■□□□□ 0.4
RHBDD1-212ENST00000483268 ZNF219Q9P2Y4 722 aaPredicted RBP17.43■□□□□ 0.38
RHBDD1-212ENST00000483268 DSG3P32926 999 aa17.37■□□□□ 0.37
RHBDD1-212ENST00000483268 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
RHBDD1-212ENST00000483268 ATXN8OSP0DMR3 200 aa17.27■□□□□ 0.36
RHBDD1-212ENST00000483268 CSRNP3Q8WYN3 585 aa17.27■□□□□ 0.36
RHBDD1-212ENST00000483268 EHMT2Q96KQ7 1210 aa17.23■□□□□ 0.35
RHBDD1-212ENST00000483268 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
RHBDD1-212ENST00000483268 ABCB7O75027 752 aa17.14■□□□□ 0.33
RHBDD1-212ENST00000483268 POLA2Q14181 598 aa17.04■□□□□ 0.32
RHBDD1-212ENST00000483268 ZBTB12Q9Y330 459 aaPredicted RBP16.82■□□□□ 0.28
RHBDD1-212ENST00000483268 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
RHBDD1-212ENST00000483268 FBLN2P98095 1184 aa16.56■□□□□ 0.24
RHBDD1-212ENST00000483268 MKRN4PQ13434 485 aaPredicted RBP16.46■□□□□ 0.23
RHBDD1-212ENST00000483268 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
RHBDD1-212ENST00000483268 POTEHQ6S545 545 aa16.36■□□□□ 0.21
RHBDD1-212ENST00000483268 SPDYE2BA6NHP3 402 aa16.32■□□□□ 0.2
RHBDD1-212ENST00000483268 SPDYE6P0CI01 402 aa16.32■□□□□ 0.2
RHBDD1-212ENST00000483268 SPDYE2Q495Y8 402 aa16.32■□□□□ 0.2
RHBDD1-212ENST00000483268 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
RHBDD1-212ENST00000483268 ZNF692Q9BU19 519 aaPredicted RBP16.15■□□□□ 0.18
RHBDD1-212ENST00000483268 SSUH2Q9Y2M2 353 aa16.15■□□□□ 0.18
RHBDD1-212ENST00000483268 REM2Q8IYK8 340 aaPredicted RBP16.13■□□□□ 0.17
RHBDD1-212ENST00000483268 CHRDL2Q6WN34 429 aa16.08■□□□□ 0.16
RHBDD1-212ENST00000483268 SPDYE4A6NLX3 237 aa15.94■□□□□ 0.14
RHBDD1-212ENST00000483268 PITPNM1O00562 1244 aa15.92■□□□□ 0.14
RHBDD1-212ENST00000483268 PABPN1Q86U42 306 aaKnown RBP eCLIP15.92■□□□□ 0.14
RHBDD1-212ENST00000483268 SPDYE1Q8NFV5 336 aaPredicted RBP15.9■□□□□ 0.14
RHBDD1-212ENST00000483268 CLEC11AQ9Y240 323 aa15.76■□□□□ 0.11
RHBDD1-212ENST00000483268 FXR2P51116 673 aaKnown RBP eCLIP15.74■□□□□ 0.11
RHBDD1-212ENST00000483268 PIP4P2Q8N4L2 257 aa15.72■□□□□ 0.11
RHBDD1-212ENST00000483268 PROM2Q8N271 834 aa15.71■□□□□ 0.11
RHBDD1-212ENST00000483268 STAG3Q9UJ98 1225 aa15.66■□□□□ 0.1
RHBDD1-212ENST00000483268 PRR29P0C7W0 189 aa15.63■□□□□ 0.09
RHBDD1-212ENST00000483268 FKBP8Q14318 412 aa15.6■□□□□ 0.09
RHBDD1-212ENST00000483268 PRKAR2AP13861 404 aaKnown RBP15.52■□□□□ 0.08
RHBDD1-212ENST00000483268 HAX1O00165 279 aa15.42■□□□□ 0.06
RHBDD1-212ENST00000483268 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
RHBDD1-212ENST00000483268 SP7Q8TDD2 431 aaPredicted RBP15.39■□□□□ 0.05
RHBDD1-212ENST00000483268 CREBZFQ9NS37 354 aa15.35■□□□□ 0.05
RHBDD1-212ENST00000483268 FARP1Q9Y4F1 1045 aaPredicted RBP15.3■□□□□ 0.04
RHBDD1-212ENST00000483268 FBXO3Q9UK99 471 aa15.24■□□□□ 0.03
RHBDD1-212ENST00000483268 C19orf67A6NJJ6 358 aa15.21■□□□□ 0.03
RHBDD1-212ENST00000483268 EVX2Q03828 476 aa15.21■□□□□ 0.03
RHBDD1-212ENST00000483268 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
RHBDD1-212ENST00000483268 PLEKHG5O94827 1062 aa15.14■□□□□ 0.01
RHBDD1-212ENST00000483268 MIER1Q8N108 512 aa15.14■□□□□ 0.01
RHBDD1-212ENST00000483268 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
RHBDD1-212ENST00000483268 PLCD3Q8N3E9 789 aa15.08■□□□□ 0
RHBDD1-212ENST00000483268 CD44P16070 742 aaKnown RBP15.06■□□□□ 0
RHBDD1-212ENST00000483268 ZBTB47Q9UFB7 747 aaPredicted RBP15.01□□□□□ -0.01
RHBDD1-212ENST00000483268 VASPP50552 380 aaPredicted RBP14.98□□□□□ -0.01
RHBDD1-212ENST00000483268 PAK3O75914 559 aaPredicted RBP14.93□□□□□ -0.02
RHBDD1-212ENST00000483268 CLCN6P51797 869 aa14.91□□□□□ -0.02
RHBDD1-212ENST00000483268 ZRANB1Q9UGI0 708 aa14.91□□□□□ -0.02
RHBDD1-212ENST00000483268 ZNF579Q8NAF0 562 aaKnown RBP14.9□□□□□ -0.02
RHBDD1-212ENST00000483268 GABBR2O75899 941 aa14.89□□□□□ -0.03
RHBDD1-212ENST00000483268 NUBP1P53384 320 aa14.82□□□□□ -0.04
RHBDD1-212ENST00000483268 RASEFQ8IZ41 740 aa14.8□□□□□ -0.04
RHBDD1-212ENST00000483268 TSPYL2Q9H2G4 693 aaPredicted RBP14.78□□□□□ -0.04
RHBDD1-212ENST00000483268 KLHL34Q8N239 644 aa14.77□□□□□ -0.05
RHBDD1-212ENST00000483268 CCDC61Q9Y6R9 512 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms