RNA–Protein interactions for RNA: ENST00000483053.1

CTPS2-205, Transcript of CTP synthase 2, humanhuman

TSL 1 (best)

Gene CTPS2, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-205ENST00000483053 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
CTPS2-205ENST00000483053 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
CTPS2-205ENST00000483053 SENP3Q9H4L4 574 aaPredicted RBP15.46■□□□□ 0.07
CTPS2-205ENST00000483053 PHF23Q9BUL5 403 aaPredicted RBP15.14■□□□□ 0.01
CTPS2-205ENST00000483053 POTEDQ86YR6 584 aa15.02■□□□□ -0
CTPS2-205ENST00000483053 FOXD1Q16676 465 aa14.32□□□□□ -0.12
CTPS2-205ENST00000483053 MSH5O43196 834 aa13.75□□□□□ -0.21
CTPS2-205ENST00000483053 PLPPR3Q6T4P5 718 aa13.34□□□□□ -0.27
CTPS2-205ENST00000483053 PIAS4Q8N2W9 510 aaPredicted RBP13.34□□□□□ -0.27
CTPS2-205ENST00000483053 PPP6R1Q9UPN7 881 aa13.09□□□□□ -0.31
CTPS2-205ENST00000483053 ADRA2BP18089 450 aa13.04□□□□□ -0.32
CTPS2-205ENST00000483053 CACNB1Q02641 598 aaPredicted RBP12.37□□□□□ -0.43
CTPS2-205ENST00000483053 SCAF1Q9H7N4 1312 aaKnown RBP12.19□□□□□ -0.46
CTPS2-205ENST00000483053 DMRT2Q9Y5R5 561 aa12.17□□□□□ -0.46
CTPS2-205ENST00000483053 MAPK8IP2Q13387 824 aaPredicted RBP12.05□□□□□ -0.48
CTPS2-205ENST00000483053 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
CTPS2-205ENST00000483053 HOXD11P31277 338 aaPredicted RBP11.62□□□□□ -0.55
CTPS2-205ENST00000483053 RNF39Q9H2S5 420 aa11.62□□□□□ -0.55
CTPS2-205ENST00000483053 POTEHQ6S545 545 aa11.59□□□□□ -0.55
CTPS2-205ENST00000483053 PPP4R3CPQ6ZMV5 832 aa11.58□□□□□ -0.56
CTPS2-205ENST00000483053 CNKSR2Q8WXI2 1034 aa11.5□□□□□ -0.57
CTPS2-205ENST00000483053 RNF216Q9NWF9 866 aaPredicted RBP11.48□□□□□ -0.57
CTPS2-205ENST00000483053 C1QBPQ07021 282 aaKnown RBP11.46□□□□□ -0.57
CTPS2-205ENST00000483053 DNAJC5BQ9UF47 199 aa11.43□□□□□ -0.58
CTPS2-205ENST00000483053 NCBP3Q53F19 620 aaKnown RBP11.18□□□□□ -0.62
CTPS2-205ENST00000483053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.06□□□□□ -0.64
CTPS2-205ENST00000483053 NPM3O75607 178 aaKnown RBP10.85□□□□□ -0.67
CTPS2-205ENST00000483053 U3KPZ7 1027 aaPredicted RBP10.73□□□□□ -0.69
CTPS2-205ENST00000483053 CAPN15O75808 1086 aa10.7□□□□□ -0.7
CTPS2-205ENST00000483053 DSG3P32926 999 aa10.7□□□□□ -0.7
CTPS2-205ENST00000483053 APLP2Q06481 763 aa10.65□□□□□ -0.7
CTPS2-205ENST00000483053 SPINK5Q9NQ38 1064 aaPredicted RBP10.62□□□□□ -0.71
CTPS2-205ENST00000483053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.53□□□□□ -0.72
CTPS2-205ENST00000483053 HNRNPUL2Q1KMD3 747 aaKnown RBP10.53□□□□□ -0.72
CTPS2-205ENST00000483053 ZNF219Q9P2Y4 722 aaPredicted RBP10.52□□□□□ -0.73
CTPS2-205ENST00000483053 TRHP20396 242 aaPredicted RBP10.43□□□□□ -0.74
CTPS2-205ENST00000483053 KCNA4P22459 653 aa10.43□□□□□ -0.74
CTPS2-205ENST00000483053 SP7Q8TDD2 431 aaPredicted RBP10.42□□□□□ -0.74
CTPS2-205ENST00000483053 SLC4A2P04920 1241 aa10.41□□□□□ -0.74
CTPS2-205ENST00000483053 SAMD1Q6SPF0 538 aaPredicted RBP10.4□□□□□ -0.74
CTPS2-205ENST00000483053 RBM42Q9BTD8 480 aaKnown RBP10.36□□□□□ -0.75
CTPS2-205ENST00000483053 EHMT2Q96KQ7 1210 aa10.35□□□□□ -0.75
CTPS2-205ENST00000483053 ABCB7O75027 752 aa10.34□□□□□ -0.75
CTPS2-205ENST00000483053 CHRDL2Q6WN34 429 aa10.27□□□□□ -0.77
CTPS2-205ENST00000483053 MYCNP04198 464 aaPredicted RBP10.13□□□□□ -0.79
CTPS2-205ENST00000483053 POLA2Q14181 598 aa10.1□□□□□ -0.79
CTPS2-205ENST00000483053 ZBTB12Q9Y330 459 aaPredicted RBP10.03□□□□□ -0.8
CTPS2-205ENST00000483053 CSRNP3Q8WYN3 585 aa10.02□□□□□ -0.81
CTPS2-205ENST00000483053 AKT1S1Q96B36 256 aa10.01□□□□□ -0.81
CTPS2-205ENST00000483053 SLC4A1APQ9BWU0 796 aaKnown RBP9.98□□□□□ -0.81
CTPS2-205ENST00000483053 PLSCR2Q9NRY7 297 aa9.95□□□□□ -0.82
CTPS2-205ENST00000483053 HAX1O00165 279 aa9.89□□□□□ -0.83
CTPS2-205ENST00000483053 REM2Q8IYK8 340 aaPredicted RBP9.84□□□□□ -0.83
CTPS2-205ENST00000483053 FOXD4L1Q9NU39 408 aa9.84□□□□□ -0.83
CTPS2-205ENST00000483053 PIP4P2Q8N4L2 257 aa9.8□□□□□ -0.84
CTPS2-205ENST00000483053 LHX8Q68G74 356 aa9.75□□□□□ -0.85
CTPS2-205ENST00000483053 FXR2P51116 673 aaKnown RBP eCLIP9.74□□□□□ -0.85
CTPS2-205ENST00000483053 ATF5Q9Y2D1 282 aaPredicted RBP9.74□□□□□ -0.85
CTPS2-205ENST00000483053 OSCARQ8IYS5 282 aa9.73□□□□□ -0.85
CTPS2-205ENST00000483053 PITPNM1O00562 1244 aa9.7□□□□□ -0.86
CTPS2-205ENST00000483053 ATXN8OSP0DMR3 200 aa9.67□□□□□ -0.86
CTPS2-205ENST00000483053 EVX2Q03828 476 aa9.65□□□□□ -0.86
CTPS2-205ENST00000483053 ZBTB22O15209 634 aa9.64□□□□□ -0.87
CTPS2-205ENST00000483053 SPDYE2BA6NHP3 402 aa9.63□□□□□ -0.87
CTPS2-205ENST00000483053 SPDYE6P0CI01 402 aa9.63□□□□□ -0.87
CTPS2-205ENST00000483053 SPDYE2Q495Y8 402 aa9.63□□□□□ -0.87
CTPS2-205ENST00000483053 FBLN2P98095 1184 aa9.6□□□□□ -0.87
CTPS2-205ENST00000483053 SPDYE1Q8NFV5 336 aaPredicted RBP9.54□□□□□ -0.88
CTPS2-205ENST00000483053 PRKAR2AP13861 404 aaKnown RBP9.48□□□□□ -0.89
CTPS2-205ENST00000483053 CLEC11AQ9Y240 323 aa9.44□□□□□ -0.9
CTPS2-205ENST00000483053 C19orf67A6NJJ6 358 aa9.43□□□□□ -0.9
CTPS2-205ENST00000483053 ZNF692Q9BU19 519 aaPredicted RBP9.42□□□□□ -0.9
CTPS2-205ENST00000483053 GABBR2O75899 941 aa9.41□□□□□ -0.9
CTPS2-205ENST00000483053 SSUH2Q9Y2M2 353 aa9.41□□□□□ -0.9
CTPS2-205ENST00000483053 CLCN6P51797 869 aa9.33□□□□□ -0.92
CTPS2-205ENST00000483053 PRR29P0C7W0 189 aa9.31□□□□□ -0.92
CTPS2-205ENST00000483053 MKRN4PQ13434 485 aaPredicted RBP9.31□□□□□ -0.92
CTPS2-205ENST00000483053 POTEMA6NI47 508 aa9.24□□□□□ -0.93
CTPS2-205ENST00000483053 PABPN1Q86U42 306 aaKnown RBP eCLIP9.23□□□□□ -0.93
CTPS2-205ENST00000483053 CHADLQ6NUI6 762 aa9.22□□□□□ -0.93
CTPS2-205ENST00000483053 POTEIP0CG38 1075 aa9.19□□□□□ -0.94
CTPS2-205ENST00000483053 CD44P16070 742 aaKnown RBP9.17□□□□□ -0.94
CTPS2-205ENST00000483053 POTEGQ6S5H5 508 aa9.17□□□□□ -0.94
CTPS2-205ENST00000483053 RTN4Q9NQC3 1192 aaKnown RBP9.17□□□□□ -0.94
CTPS2-205ENST00000483053 PCDH10Q9P2E7 1040 aa9.17□□□□□ -0.94
CTPS2-205ENST00000483053 FARP1Q9Y4F1 1045 aaPredicted RBP9.16□□□□□ -0.94
CTPS2-205ENST00000483053 SLC24A1O60721 1099 aa9.11□□□□□ -0.95
CTPS2-205ENST00000483053 DCBLD2Q96PD2 775 aa9.09□□□□□ -0.95
CTPS2-205ENST00000483053 AMER1Q5JTC6 1135 aaPredicted RBP9.08□□□□□ -0.96
CTPS2-205ENST00000483053 STAG3Q9UJ98 1225 aa9.07□□□□□ -0.96
CTPS2-205ENST00000483053 ZNF579Q8NAF0 562 aaKnown RBP9.04□□□□□ -0.96
CTPS2-205ENST00000483053 OTUD5Q96G74 571 aa9.04□□□□□ -0.96
CTPS2-205ENST00000483053 ZRANB1Q9UGI0 708 aa8.99□□□□□ -0.97
CTPS2-205ENST00000483053 FKBP8Q14318 412 aa8.98□□□□□ -0.97
CTPS2-205ENST00000483053 PAK3O75914 559 aaPredicted RBP8.96□□□□□ -0.98
CTPS2-205ENST00000483053 CREBZFQ9NS37 354 aa8.93□□□□□ -0.98
CTPS2-205ENST00000483053 NPM1P06748 294 aaKnown RBP eCLIP8.9□□□□□ -0.98
CTPS2-205ENST00000483053 POTEB2H3BUK9 544 aa8.86□□□□□ -0.99
CTPS2-205ENST00000483053 GALR2O43603 387 aaPredicted RBP8.86□□□□□ -0.99
CTPS2-205ENST00000483053 SPDYE4A6NLX3 237 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms