RNA–Protein interactions for RNA: ENST00000482961.1

GTDC1-216, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best)

Gene GTDC1, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-216ENST00000482961 AEBP2Q6ZN18 517 aaPredicted RBP22.27■■□□□ 1.16
GTDC1-216ENST00000482961 CHIC1Q5VXU3 224 aa20.83■□□□□ 0.93
GTDC1-216ENST00000482961 SENP3Q9H4L4 574 aaPredicted RBP19.08■□□□□ 0.64
GTDC1-216ENST00000482961 PHF23Q9BUL5 403 aaPredicted RBP18.79■□□□□ 0.6
GTDC1-216ENST00000482961 FOXD1Q16676 465 aa17.86■□□□□ 0.45
GTDC1-216ENST00000482961 POTEDQ86YR6 584 aa17.34■□□□□ 0.37
GTDC1-216ENST00000482961 MSH5O43196 834 aa16.9■□□□□ 0.3
GTDC1-216ENST00000482961 PIAS4Q8N2W9 510 aaPredicted RBP16.6■□□□□ 0.25
GTDC1-216ENST00000482961 PPP6R1Q9UPN7 881 aa16.32■□□□□ 0.2
GTDC1-216ENST00000482961 PLPPR3Q6T4P5 718 aa16.31■□□□□ 0.2
GTDC1-216ENST00000482961 ADRA2BP18089 450 aa16.26■□□□□ 0.19
GTDC1-216ENST00000482961 MAPK8IP2Q13387 824 aaPredicted RBP15.09■□□□□ 0.01
GTDC1-216ENST00000482961 DMRT2Q9Y5R5 561 aa15.04■□□□□ -0
GTDC1-216ENST00000482961 SCAF1Q9H7N4 1312 aaKnown RBP14.89□□□□□ -0.03
GTDC1-216ENST00000482961 CACNB1Q02641 598 aaPredicted RBP14.85□□□□□ -0.03
GTDC1-216ENST00000482961 DCAF8L1A6NGE4 600 aa14.57□□□□□ -0.08
GTDC1-216ENST00000482961 RNF39Q9H2S5 420 aa14.35□□□□□ -0.11
GTDC1-216ENST00000482961 HOXD11P31277 338 aaPredicted RBP14.28□□□□□ -0.12
GTDC1-216ENST00000482961 PPP4R3CPQ6ZMV5 832 aa14.24□□□□□ -0.13
GTDC1-216ENST00000482961 C1QBPQ07021 282 aaKnown RBP14.13□□□□□ -0.15
GTDC1-216ENST00000482961 CNKSR2Q8WXI2 1034 aa14.08□□□□□ -0.16
GTDC1-216ENST00000482961 RNF216Q9NWF9 866 aaPredicted RBP14.06□□□□□ -0.16
GTDC1-216ENST00000482961 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
GTDC1-216ENST00000482961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.22
GTDC1-216ENST00000482961 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
GTDC1-216ENST00000482961 POTEHQ6S545 545 aa13.51□□□□□ -0.25
GTDC1-216ENST00000482961 NPM3O75607 178 aaKnown RBP13.34□□□□□ -0.27
GTDC1-216ENST00000482961 CAPN15O75808 1086 aa13.32□□□□□ -0.28
GTDC1-216ENST00000482961 DSG3P32926 999 aa13.3□□□□□ -0.28
GTDC1-216ENST00000482961 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
GTDC1-216ENST00000482961 SPINK5Q9NQ38 1064 aaPredicted RBP13.28□□□□□ -0.28
GTDC1-216ENST00000482961 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
GTDC1-216ENST00000482961 ABCB7O75027 752 aa12.97□□□□□ -0.33
GTDC1-216ENST00000482961 APLP2Q06481 763 aa12.89□□□□□ -0.35
GTDC1-216ENST00000482961 ZNF219Q9P2Y4 722 aaPredicted RBP12.89□□□□□ -0.35
GTDC1-216ENST00000482961 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
GTDC1-216ENST00000482961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.76□□□□□ -0.37
GTDC1-216ENST00000482961 HNRNPUL2Q1KMD3 747 aaKnown RBP12.76□□□□□ -0.37
GTDC1-216ENST00000482961 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
GTDC1-216ENST00000482961 KCNA4P22459 653 aa12.66□□□□□ -0.38
GTDC1-216ENST00000482961 SAMD1Q6SPF0 538 aaPredicted RBP12.66□□□□□ -0.38
GTDC1-216ENST00000482961 CHRDL2Q6WN34 429 aa12.63□□□□□ -0.39
GTDC1-216ENST00000482961 POLA2Q14181 598 aa12.51□□□□□ -0.41
GTDC1-216ENST00000482961 SP7Q8TDD2 431 aaPredicted RBP12.42□□□□□ -0.42
GTDC1-216ENST00000482961 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
GTDC1-216ENST00000482961 AKT1S1Q96B36 256 aa12.3□□□□□ -0.44
GTDC1-216ENST00000482961 PIP4P2Q8N4L2 257 aa12.22□□□□□ -0.45
GTDC1-216ENST00000482961 REM2Q8IYK8 340 aaPredicted RBP12.2□□□□□ -0.46
GTDC1-216ENST00000482961 HAX1O00165 279 aa12.19□□□□□ -0.46
GTDC1-216ENST00000482961 ZBTB12Q9Y330 459 aaPredicted RBP12.17□□□□□ -0.46
GTDC1-216ENST00000482961 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
GTDC1-216ENST00000482961 OSCARQ8IYS5 282 aa12.11□□□□□ -0.47
GTDC1-216ENST00000482961 PITPNM1O00562 1244 aa12.08□□□□□ -0.48
GTDC1-216ENST00000482961 FXR2P51116 673 aaKnown RBP eCLIP12.05□□□□□ -0.48
GTDC1-216ENST00000482961 EVX2Q03828 476 aa11.96□□□□□ -0.49
GTDC1-216ENST00000482961 FOXD4L1Q9NU39 408 aa11.96□□□□□ -0.49
GTDC1-216ENST00000482961 SLC4A1APQ9BWU0 796 aaKnown RBP11.86□□□□□ -0.51
GTDC1-216ENST00000482961 PRKAR2AP13861 404 aaKnown RBP11.79□□□□□ -0.52
GTDC1-216ENST00000482961 CLEC11AQ9Y240 323 aa11.77□□□□□ -0.53
GTDC1-216ENST00000482961 SPDYE2BA6NHP3 402 aa11.75□□□□□ -0.53
GTDC1-216ENST00000482961 SPDYE6P0CI01 402 aa11.75□□□□□ -0.53
GTDC1-216ENST00000482961 SPDYE2Q495Y8 402 aa11.75□□□□□ -0.53
GTDC1-216ENST00000482961 FBLN2P98095 1184 aa11.7□□□□□ -0.54
GTDC1-216ENST00000482961 SPDYE1Q8NFV5 336 aaPredicted RBP11.69□□□□□ -0.54
GTDC1-216ENST00000482961 C19orf67A6NJJ6 358 aa11.68□□□□□ -0.54
GTDC1-216ENST00000482961 LHX8Q68G74 356 aa11.67□□□□□ -0.54
GTDC1-216ENST00000482961 GABBR2O75899 941 aa11.66□□□□□ -0.54
GTDC1-216ENST00000482961 ZBTB22O15209 634 aa11.6□□□□□ -0.55
GTDC1-216ENST00000482961 ATXN8OSP0DMR3 200 aa11.6□□□□□ -0.55
GTDC1-216ENST00000482961 ZNF692Q9BU19 519 aaPredicted RBP11.59□□□□□ -0.55
GTDC1-216ENST00000482961 CHADLQ6NUI6 762 aa11.57□□□□□ -0.56
GTDC1-216ENST00000482961 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
GTDC1-216ENST00000482961 SSUH2Q9Y2M2 353 aa11.51□□□□□ -0.57
GTDC1-216ENST00000482961 PRR29P0C7W0 189 aa11.47□□□□□ -0.57
GTDC1-216ENST00000482961 PLSCR2Q9NRY7 297 aa11.4□□□□□ -0.58
GTDC1-216ENST00000482961 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
GTDC1-216ENST00000482961 POTEIP0CG38 1075 aa11.38□□□□□ -0.59
GTDC1-216ENST00000482961 CD44P16070 742 aaKnown RBP11.38□□□□□ -0.59
GTDC1-216ENST00000482961 FARP1Q9Y4F1 1045 aaPredicted RBP11.3□□□□□ -0.6
GTDC1-216ENST00000482961 DCBLD2Q96PD2 775 aa11.28□□□□□ -0.6
GTDC1-216ENST00000482961 CLCN6P51797 869 aa11.27□□□□□ -0.61
GTDC1-216ENST00000482961 ZRANB1Q9UGI0 708 aa11.16□□□□□ -0.62
GTDC1-216ENST00000482961 ZNF579Q8NAF0 562 aaKnown RBP11.13□□□□□ -0.63
GTDC1-216ENST00000482961 OTUD5Q96G74 571 aa11.08□□□□□ -0.64
GTDC1-216ENST00000482961 GALR2O43603 387 aaPredicted RBP11.07□□□□□ -0.64
GTDC1-216ENST00000482961 POTEMA6NI47 508 aa11.02□□□□□ -0.65
GTDC1-216ENST00000482961 POTEB2H3BUK9 544 aa11.02□□□□□ -0.65
GTDC1-216ENST00000482961 CREBZFQ9NS37 354 aa11.01□□□□□ -0.65
GTDC1-216ENST00000482961 PAK3O75914 559 aaPredicted RBP10.97□□□□□ -0.65
GTDC1-216ENST00000482961 POTEGQ6S5H5 508 aa10.97□□□□□ -0.65
GTDC1-216ENST00000482961 STAG3Q9UJ98 1225 aa10.95□□□□□ -0.66
GTDC1-216ENST00000482961 PHF12Q96QT6 1004 aa10.94□□□□□ -0.66
GTDC1-216ENST00000482961 PELP1Q8IZL8 1130 aaKnown RBP10.89□□□□□ -0.67
GTDC1-216ENST00000482961 NPM1P06748 294 aaKnown RBP eCLIP10.83□□□□□ -0.68
GTDC1-216ENST00000482961 PCDH10Q9P2E7 1040 aa10.82□□□□□ -0.68
GTDC1-216ENST00000482961 METRNQ9UJH8 293 aa10.82□□□□□ -0.68
GTDC1-216ENST00000482961 SLC39A7Q92504 469 aa10.78□□□□□ -0.68
GTDC1-216ENST00000482961 C7P10643 843 aa10.77□□□□□ -0.69
GTDC1-216ENST00000482961 ASTLQ6HA08 431 aaPredicted RBP10.77□□□□□ -0.69
GTDC1-216ENST00000482961 MS4A3Q96HJ5 214 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms