RNA–Protein interactions for RNA: ENST00000482826.1

PPP4R3B-202, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 435 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-202ENST00000482826 AEBP2Q6ZN18 517 aaPredicted RBP34.17■■■■□ 3.06
PPP4R3B-202ENST00000482826 CHIC1Q5VXU3 224 aa32.56■■■□□ 2.8
PPP4R3B-202ENST00000482826 SENP3Q9H4L4 574 aaPredicted RBP29.13■■■□□ 2.25
PPP4R3B-202ENST00000482826 PHF23Q9BUL5 403 aaPredicted RBP28.78■■■□□ 2.2
PPP4R3B-202ENST00000482826 FOXD1Q16676 465 aa27.14■■□□□ 1.94
PPP4R3B-202ENST00000482826 PLPPR3Q6T4P5 718 aa26.08■■□□□ 1.77
PPP4R3B-202ENST00000482826 PPP6R1Q9UPN7 881 aa25.47■■□□□ 1.67
PPP4R3B-202ENST00000482826 ADRA2BP18089 450 aa25.4■■□□□ 1.66
PPP4R3B-202ENST00000482826 PIAS4Q8N2W9 510 aaPredicted RBP25.39■■□□□ 1.66
PPP4R3B-202ENST00000482826 MSH5O43196 834 aa25.36■■□□□ 1.65
PPP4R3B-202ENST00000482826 POTEDQ86YR6 584 aa25.3■■□□□ 1.64
PPP4R3B-202ENST00000482826 MAPK8IP2Q13387 824 aaPredicted RBP23.3■■□□□ 1.32
PPP4R3B-202ENST00000482826 SCAF1Q9H7N4 1312 aaKnown RBP23.26■■□□□ 1.31
PPP4R3B-202ENST00000482826 DMRT2Q9Y5R5 561 aa23.12■■□□□ 1.29
PPP4R3B-202ENST00000482826 PPP4R3CPQ6ZMV5 832 aa22.87■■□□□ 1.25
PPP4R3B-202ENST00000482826 CNKSR2Q8WXI2 1034 aa22.41■■□□□ 1.18
PPP4R3B-202ENST00000482826 HOXD11P31277 338 aaPredicted RBP22.31■■□□□ 1.16
PPP4R3B-202ENST00000482826 DCAF8L1A6NGE4 600 aa22.19■■□□□ 1.14
PPP4R3B-202ENST00000482826 RNF216Q9NWF9 866 aaPredicted RBP22.18■■□□□ 1.14
PPP4R3B-202ENST00000482826 NCBP3Q53F19 620 aaKnown RBP22.05■■□□□ 1.12
PPP4R3B-202ENST00000482826 CACNB1Q02641 598 aaPredicted RBP21.75■■□□□ 1.07
PPP4R3B-202ENST00000482826 NPM3O75607 178 aaKnown RBP21.7■■□□□ 1.06
PPP4R3B-202ENST00000482826 RNF39Q9H2S5 420 aa21.65■■□□□ 1.06
PPP4R3B-202ENST00000482826 DNAJC5BQ9UF47 199 aa21.52■■□□□ 1.04
PPP4R3B-202ENST00000482826 KCNA4P22459 653 aa21.41■■□□□ 1.02
PPP4R3B-202ENST00000482826 C1QBPQ07021 282 aaKnown RBP21.34■■□□□ 1.01
PPP4R3B-202ENST00000482826 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.29■■□□□ 1
PPP4R3B-202ENST00000482826 U3KPZ7 1027 aaPredicted RBP20.83■□□□□ 0.93
PPP4R3B-202ENST00000482826 SLC4A2P04920 1241 aa20.7■□□□□ 0.9
PPP4R3B-202ENST00000482826 SPINK5Q9NQ38 1064 aaPredicted RBP20.5■□□□□ 0.87
PPP4R3B-202ENST00000482826 CAPN15O75808 1086 aa20.47■□□□□ 0.87
PPP4R3B-202ENST00000482826 DSG3P32926 999 aa20.31■□□□□ 0.84
PPP4R3B-202ENST00000482826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
PPP4R3B-202ENST00000482826 HNRNPUL2Q1KMD3 747 aaKnown RBP20.3■□□□□ 0.84
PPP4R3B-202ENST00000482826 APLP2Q06481 763 aa20.27■□□□□ 0.84
PPP4R3B-202ENST00000482826 SLC4A1APQ9BWU0 796 aaKnown RBP20.24■□□□□ 0.83
PPP4R3B-202ENST00000482826 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
PPP4R3B-202ENST00000482826 TRHP20396 242 aaPredicted RBP20.17■□□□□ 0.82
PPP4R3B-202ENST00000482826 ZNF219Q9P2Y4 722 aaPredicted RBP20.13■□□□□ 0.81
PPP4R3B-202ENST00000482826 MYCNP04198 464 aaPredicted RBP20.07■□□□□ 0.8
PPP4R3B-202ENST00000482826 ABCB7O75027 752 aa20.01■□□□□ 0.79
PPP4R3B-202ENST00000482826 FOXD4L1Q9NU39 408 aa19.94■□□□□ 0.78
PPP4R3B-202ENST00000482826 POTEHQ6S545 545 aa19.71■□□□□ 0.75
PPP4R3B-202ENST00000482826 ZBTB22O15209 634 aa19.69■□□□□ 0.74
PPP4R3B-202ENST00000482826 POLA2Q14181 598 aa19.66■□□□□ 0.74
PPP4R3B-202ENST00000482826 ATF5Q9Y2D1 282 aaPredicted RBP19.61■□□□□ 0.73
PPP4R3B-202ENST00000482826 RBM42Q9BTD8 480 aaKnown RBP19.38■□□□□ 0.69
PPP4R3B-202ENST00000482826 ATXN8OSP0DMR3 200 aa19.31■□□□□ 0.68
PPP4R3B-202ENST00000482826 ZBTB12Q9Y330 459 aaPredicted RBP19.27■□□□□ 0.68
PPP4R3B-202ENST00000482826 OSCARQ8IYS5 282 aa19.02■□□□□ 0.64
PPP4R3B-202ENST00000482826 AKT1S1Q96B36 256 aa18.96■□□□□ 0.63
PPP4R3B-202ENST00000482826 CHRDL2Q6WN34 429 aa18.92■□□□□ 0.62
PPP4R3B-202ENST00000482826 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
PPP4R3B-202ENST00000482826 FBLN2P98095 1184 aa18.85■□□□□ 0.61
PPP4R3B-202ENST00000482826 REM2Q8IYK8 340 aaPredicted RBP18.79■□□□□ 0.6
PPP4R3B-202ENST00000482826 EHMT2Q96KQ7 1210 aa18.72■□□□□ 0.59
PPP4R3B-202ENST00000482826 MKRN4PQ13434 485 aaPredicted RBP18.71■□□□□ 0.59
PPP4R3B-202ENST00000482826 SPDYE2BA6NHP3 402 aa18.67■□□□□ 0.58
PPP4R3B-202ENST00000482826 SPDYE6P0CI01 402 aa18.67■□□□□ 0.58
PPP4R3B-202ENST00000482826 SPDYE2Q495Y8 402 aa18.67■□□□□ 0.58
PPP4R3B-202ENST00000482826 PITPNM1O00562 1244 aa18.58■□□□□ 0.56
PPP4R3B-202ENST00000482826 PIP4P2Q8N4L2 257 aa18.49■□□□□ 0.55
PPP4R3B-202ENST00000482826 ZNF692Q9BU19 519 aaPredicted RBP18.48■□□□□ 0.55
PPP4R3B-202ENST00000482826 SSUH2Q9Y2M2 353 aa18.43■□□□□ 0.54
PPP4R3B-202ENST00000482826 FXR2P51116 673 aaKnown RBP eCLIP18.4■□□□□ 0.54
PPP4R3B-202ENST00000482826 SPDYE1Q8NFV5 336 aaPredicted RBP18.33■□□□□ 0.52
PPP4R3B-202ENST00000482826 CLEC11AQ9Y240 323 aa18.29■□□□□ 0.52
PPP4R3B-202ENST00000482826 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.51
PPP4R3B-202ENST00000482826 SP7Q8TDD2 431 aaPredicted RBP18.21■□□□□ 0.51
PPP4R3B-202ENST00000482826 HAX1O00165 279 aa18.14■□□□□ 0.49
PPP4R3B-202ENST00000482826 PRKAR2AP13861 404 aaKnown RBP18.11■□□□□ 0.49
PPP4R3B-202ENST00000482826 PRR29P0C7W0 189 aa18.01■□□□□ 0.47
PPP4R3B-202ENST00000482826 CHADLQ6NUI6 762 aa17.92■□□□□ 0.46
PPP4R3B-202ENST00000482826 SPDYE4A6NLX3 237 aa17.9■□□□□ 0.46
PPP4R3B-202ENST00000482826 EVX2Q03828 476 aa17.9■□□□□ 0.46
PPP4R3B-202ENST00000482826 C19orf67A6NJJ6 358 aa17.8■□□□□ 0.44
PPP4R3B-202ENST00000482826 STAG3Q9UJ98 1225 aa17.73■□□□□ 0.43
PPP4R3B-202ENST00000482826 FARP1Q9Y4F1 1045 aaPredicted RBP17.68■□□□□ 0.42
PPP4R3B-202ENST00000482826 CREBZFQ9NS37 354 aa17.58■□□□□ 0.4
PPP4R3B-202ENST00000482826 CD44P16070 742 aaKnown RBP17.54■□□□□ 0.4
PPP4R3B-202ENST00000482826 GABBR2O75899 941 aa17.51■□□□□ 0.39
PPP4R3B-202ENST00000482826 PROM2Q8N271 834 aa17.47■□□□□ 0.39
PPP4R3B-202ENST00000482826 ZRANB1Q9UGI0 708 aa17.32■□□□□ 0.36
PPP4R3B-202ENST00000482826 MNX1P50219 401 aaPredicted RBP17.29■□□□□ 0.36
PPP4R3B-202ENST00000482826 CLCN6P51797 869 aa17.28■□□□□ 0.36
PPP4R3B-202ENST00000482826 NPM1P06748 294 aaKnown RBP eCLIP17.27■□□□□ 0.36
PPP4R3B-202ENST00000482826 ZNF579Q8NAF0 562 aaKnown RBP17.27■□□□□ 0.36
PPP4R3B-202ENST00000482826 PAK3O75914 559 aaPredicted RBP17.2■□□□□ 0.34
PPP4R3B-202ENST00000482826 POTEIP0CG38 1075 aa17.13■□□□□ 0.33
PPP4R3B-202ENST00000482826 FKBP8Q14318 412 aa17.13■□□□□ 0.33
PPP4R3B-202ENST00000482826 PHF12Q96QT6 1004 aa17.09■□□□□ 0.33
PPP4R3B-202ENST00000482826 LHX8Q68G74 356 aa17.08■□□□□ 0.32
PPP4R3B-202ENST00000482826 MIER1Q8N108 512 aa17.08■□□□□ 0.32
PPP4R3B-202ENST00000482826 DCBLD2Q96PD2 775 aa17.08■□□□□ 0.32
PPP4R3B-202ENST00000482826 GALR2O43603 387 aaPredicted RBP17.05■□□□□ 0.32
PPP4R3B-202ENST00000482826 PLEKHG5O94827 1062 aa17.05■□□□□ 0.32
PPP4R3B-202ENST00000482826 PLCD3Q8N3E9 789 aa16.96■□□□□ 0.31
PPP4R3B-202ENST00000482826 TSPYL2Q9H2G4 693 aaPredicted RBP16.96■□□□□ 0.31
PPP4R3B-202ENST00000482826 CCDC61Q9Y6R9 512 aa16.87■□□□□ 0.29
PPP4R3B-202ENST00000482826 MS4A3Q96HJ5 214 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms