RNA–Protein interactions for RNA: ENST00000482778.1

RGPD5-210, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 2

Gene RGPD5, Length 405 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-210ENST00000482778 AEBP2Q6ZN18 517 aaPredicted RBP24.6■■□□□ 1.53
RGPD5-210ENST00000482778 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
RGPD5-210ENST00000482778 SENP3Q9H4L4 574 aaPredicted RBP21.1■□□□□ 0.97
RGPD5-210ENST00000482778 PHF23Q9BUL5 403 aaPredicted RBP20.77■□□□□ 0.92
RGPD5-210ENST00000482778 FOXD1Q16676 465 aa19.68■□□□□ 0.74
RGPD5-210ENST00000482778 POTEDQ86YR6 584 aa18.83■□□□□ 0.6
RGPD5-210ENST00000482778 MSH5O43196 834 aa18.61■□□□□ 0.57
RGPD5-210ENST00000482778 PIAS4Q8N2W9 510 aaPredicted RBP18.35■□□□□ 0.53
RGPD5-210ENST00000482778 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
RGPD5-210ENST00000482778 PPP6R1Q9UPN7 881 aa18.1■□□□□ 0.49
RGPD5-210ENST00000482778 ADRA2BP18089 450 aa18.05■□□□□ 0.48
RGPD5-210ENST00000482778 MAPK8IP2Q13387 824 aaPredicted RBP16.71■□□□□ 0.27
RGPD5-210ENST00000482778 DMRT2Q9Y5R5 561 aa16.64■□□□□ 0.25
RGPD5-210ENST00000482778 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
RGPD5-210ENST00000482778 CACNB1Q02641 598 aaPredicted RBP16.27■□□□□ 0.2
RGPD5-210ENST00000482778 DCAF8L1A6NGE4 600 aa16.13■□□□□ 0.17
RGPD5-210ENST00000482778 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
RGPD5-210ENST00000482778 HOXD11P31277 338 aaPredicted RBP15.84■□□□□ 0.13
RGPD5-210ENST00000482778 RNF39Q9H2S5 420 aa15.81■□□□□ 0.12
RGPD5-210ENST00000482778 CNKSR2Q8WXI2 1034 aa15.7■□□□□ 0.1
RGPD5-210ENST00000482778 RNF216Q9NWF9 866 aaPredicted RBP15.65■□□□□ 0.1
RGPD5-210ENST00000482778 C1QBPQ07021 282 aaKnown RBP15.58■□□□□ 0.08
RGPD5-210ENST00000482778 DNAJC5BQ9UF47 199 aa15.34■□□□□ 0.05
RGPD5-210ENST00000482778 NCBP3Q53F19 620 aaKnown RBP15.22■□□□□ 0.03
RGPD5-210ENST00000482778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.22■□□□□ 0.03
RGPD5-210ENST00000482778 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
RGPD5-210ENST00000482778 CAPN15O75808 1086 aa14.76□□□□□ -0.05
RGPD5-210ENST00000482778 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
RGPD5-210ENST00000482778 POTEHQ6S545 545 aa14.71□□□□□ -0.05
RGPD5-210ENST00000482778 SPINK5Q9NQ38 1064 aaPredicted RBP14.7□□□□□ -0.06
RGPD5-210ENST00000482778 DSG3P32926 999 aa14.68□□□□□ -0.06
RGPD5-210ENST00000482778 TRHP20396 242 aaPredicted RBP14.43□□□□□ -0.1
RGPD5-210ENST00000482778 APLP2Q06481 763 aa14.37□□□□□ -0.11
RGPD5-210ENST00000482778 ABCB7O75027 752 aa14.36□□□□□ -0.11
RGPD5-210ENST00000482778 SLC4A2P04920 1241 aa14.35□□□□□ -0.11
RGPD5-210ENST00000482778 ZNF219Q9P2Y4 722 aaPredicted RBP14.34□□□□□ -0.11
RGPD5-210ENST00000482778 KCNA4P22459 653 aa14.31□□□□□ -0.12
RGPD5-210ENST00000482778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.26□□□□□ -0.13
RGPD5-210ENST00000482778 HNRNPUL2Q1KMD3 747 aaKnown RBP14.26□□□□□ -0.13
RGPD5-210ENST00000482778 SAMD1Q6SPF0 538 aaPredicted RBP14.14□□□□□ -0.15
RGPD5-210ENST00000482778 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
RGPD5-210ENST00000482778 POLA2Q14181 598 aa13.92□□□□□ -0.18
RGPD5-210ENST00000482778 CHRDL2Q6WN34 429 aa13.91□□□□□ -0.18
RGPD5-210ENST00000482778 MYCNP04198 464 aaPredicted RBP13.84□□□□□ -0.19
RGPD5-210ENST00000482778 AKT1S1Q96B36 256 aa13.63□□□□□ -0.23
RGPD5-210ENST00000482778 SP7Q8TDD2 431 aaPredicted RBP13.59□□□□□ -0.23
RGPD5-210ENST00000482778 ZBTB12Q9Y330 459 aaPredicted RBP13.58□□□□□ -0.24
RGPD5-210ENST00000482778 ATF5Q9Y2D1 282 aaPredicted RBP13.54□□□□□ -0.24
RGPD5-210ENST00000482778 REM2Q8IYK8 340 aaPredicted RBP13.51□□□□□ -0.25
RGPD5-210ENST00000482778 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
RGPD5-210ENST00000482778 OSCARQ8IYS5 282 aa13.47□□□□□ -0.25
RGPD5-210ENST00000482778 PIP4P2Q8N4L2 257 aa13.47□□□□□ -0.25
RGPD5-210ENST00000482778 SLC4A1APQ9BWU0 796 aaKnown RBP13.46□□□□□ -0.25
RGPD5-210ENST00000482778 HAX1O00165 279 aa13.42□□□□□ -0.26
RGPD5-210ENST00000482778 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
RGPD5-210ENST00000482778 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
RGPD5-210ENST00000482778 EVX2Q03828 476 aa13.13□□□□□ -0.31
RGPD5-210ENST00000482778 SPDYE2BA6NHP3 402 aa13.11□□□□□ -0.31
RGPD5-210ENST00000482778 ZBTB22O15209 634 aa13.11□□□□□ -0.31
RGPD5-210ENST00000482778 SPDYE6P0CI01 402 aa13.11□□□□□ -0.31
RGPD5-210ENST00000482778 FBLN2P98095 1184 aa13.11□□□□□ -0.31
RGPD5-210ENST00000482778 SPDYE2Q495Y8 402 aa13.11□□□□□ -0.31
RGPD5-210ENST00000482778 ATXN8OSP0DMR3 200 aa13.09□□□□□ -0.31
RGPD5-210ENST00000482778 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
RGPD5-210ENST00000482778 PRKAR2AP13861 404 aaKnown RBP13.04□□□□□ -0.32
RGPD5-210ENST00000482778 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
RGPD5-210ENST00000482778 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
RGPD5-210ENST00000482778 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
RGPD5-210ENST00000482778 MKRN4PQ13434 485 aaPredicted RBP12.88□□□□□ -0.35
RGPD5-210ENST00000482778 SSUH2Q9Y2M2 353 aa12.85□□□□□ -0.35
RGPD5-210ENST00000482778 GABBR2O75899 941 aa12.83□□□□□ -0.36
RGPD5-210ENST00000482778 CHADLQ6NUI6 762 aa12.82□□□□□ -0.36
RGPD5-210ENST00000482778 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
RGPD5-210ENST00000482778 LHX8Q68G74 356 aa12.77□□□□□ -0.37
RGPD5-210ENST00000482778 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
RGPD5-210ENST00000482778 CD44P16070 742 aaKnown RBP12.61□□□□□ -0.39
RGPD5-210ENST00000482778 FARP1Q9Y4F1 1045 aaPredicted RBP12.57□□□□□ -0.4
RGPD5-210ENST00000482778 POTEIP0CG38 1075 aa12.52□□□□□ -0.41
RGPD5-210ENST00000482778 CLCN6P51797 869 aa12.48□□□□□ -0.41
RGPD5-210ENST00000482778 DCBLD2Q96PD2 775 aa12.47□□□□□ -0.41
RGPD5-210ENST00000482778 ZRANB1Q9UGI0 708 aa12.38□□□□□ -0.43
RGPD5-210ENST00000482778 PLSCR2Q9NRY7 297 aa12.36□□□□□ -0.43
RGPD5-210ENST00000482778 ZNF579Q8NAF0 562 aaKnown RBP12.34□□□□□ -0.43
RGPD5-210ENST00000482778 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
RGPD5-210ENST00000482778 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
RGPD5-210ENST00000482778 GALR2O43603 387 aaPredicted RBP12.25□□□□□ -0.45
RGPD5-210ENST00000482778 PAK3O75914 559 aaPredicted RBP12.22□□□□□ -0.45
RGPD5-210ENST00000482778 CSRNP3Q8WYN3 585 aa12.16□□□□□ -0.46
RGPD5-210ENST00000482778 OTUD5Q96G74 571 aa12.16□□□□□ -0.46
RGPD5-210ENST00000482778 PHF12Q96QT6 1004 aa12.15□□□□□ -0.46
RGPD5-210ENST00000482778 SPDYE4A6NLX3 237 aa12.13□□□□□ -0.47
RGPD5-210ENST00000482778 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
RGPD5-210ENST00000482778 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
RGPD5-210ENST00000482778 POTEMA6NI47 508 aa12.04□□□□□ -0.48
RGPD5-210ENST00000482778 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
RGPD5-210ENST00000482778 POTEGQ6S5H5 508 aa12□□□□□ -0.49
RGPD5-210ENST00000482778 MNX1P50219 401 aaPredicted RBP11.98□□□□□ -0.49
RGPD5-210ENST00000482778 METRNQ9UJH8 293 aa11.98□□□□□ -0.49
RGPD5-210ENST00000482778 MS4A3Q96HJ5 214 aa11.96□□□□□ -0.49
RGPD5-210ENST00000482778 ASTLQ6HA08 431 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms