RNA–Protein interactions for RNA: ENST00000482607.1

SVIL-209, Transcript of supervillin, humanhuman

TSL 2

Gene SVIL, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-209ENST00000482607 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
SVIL-209ENST00000482607 CHIC1Q5VXU3 224 aa16.48■□□□□ 0.23
SVIL-209ENST00000482607 SENP3Q9H4L4 574 aaPredicted RBP14.83□□□□□ -0.04
SVIL-209ENST00000482607 PHF23Q9BUL5 403 aaPredicted RBP14.67□□□□□ -0.06
SVIL-209ENST00000482607 FOXD1Q16676 465 aa13.86□□□□□ -0.19
SVIL-209ENST00000482607 PLPPR3Q6T4P5 718 aa13.14□□□□□ -0.31
SVIL-209ENST00000482607 MSH5O43196 834 aa12.96□□□□□ -0.33
SVIL-209ENST00000482607 PPP6R1Q9UPN7 881 aa12.95□□□□□ -0.34
SVIL-209ENST00000482607 PIAS4Q8N2W9 510 aaPredicted RBP12.91□□□□□ -0.34
SVIL-209ENST00000482607 ADRA2BP18089 450 aa12.89□□□□□ -0.35
SVIL-209ENST00000482607 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
SVIL-209ENST00000482607 MAPK8IP2Q13387 824 aaPredicted RBP11.86□□□□□ -0.51
SVIL-209ENST00000482607 DMRT2Q9Y5R5 561 aa11.77□□□□□ -0.53
SVIL-209ENST00000482607 SCAF1Q9H7N4 1312 aaKnown RBP11.77□□□□□ -0.53
SVIL-209ENST00000482607 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
SVIL-209ENST00000482607 HOXD11P31277 338 aaPredicted RBP11.33□□□□□ -0.6
SVIL-209ENST00000482607 CNKSR2Q8WXI2 1034 aa11.31□□□□□ -0.6
SVIL-209ENST00000482607 DCAF8L1A6NGE4 600 aa11.26□□□□□ -0.61
SVIL-209ENST00000482607 RNF216Q9NWF9 866 aaPredicted RBP11.23□□□□□ -0.61
SVIL-209ENST00000482607 CACNB1Q02641 598 aaPredicted RBP11.15□□□□□ -0.62
SVIL-209ENST00000482607 RNF39Q9H2S5 420 aa11.08□□□□□ -0.64
SVIL-209ENST00000482607 NCBP3Q53F19 620 aaKnown RBP11.06□□□□□ -0.64
SVIL-209ENST00000482607 DNAJC5BQ9UF47 199 aa10.95□□□□□ -0.66
SVIL-209ENST00000482607 NPM3O75607 178 aaKnown RBP10.91□□□□□ -0.66
SVIL-209ENST00000482607 C1QBPQ07021 282 aaKnown RBP10.9□□□□□ -0.66
SVIL-209ENST00000482607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.78□□□□□ -0.68
SVIL-209ENST00000482607 KCNA4P22459 653 aa10.66□□□□□ -0.7
SVIL-209ENST00000482607 U3KPZ7 1027 aaPredicted RBP10.55□□□□□ -0.72
SVIL-209ENST00000482607 SLC4A2P04920 1241 aa10.44□□□□□ -0.74
SVIL-209ENST00000482607 SPINK5Q9NQ38 1064 aaPredicted RBP10.42□□□□□ -0.74
SVIL-209ENST00000482607 CAPN15O75808 1086 aa10.39□□□□□ -0.75
SVIL-209ENST00000482607 DSG3P32926 999 aa10.36□□□□□ -0.75
SVIL-209ENST00000482607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.22□□□□□ -0.77
SVIL-209ENST00000482607 APLP2Q06481 763 aa10.22□□□□□ -0.77
SVIL-209ENST00000482607 HNRNPUL2Q1KMD3 747 aaKnown RBP10.22□□□□□ -0.77
SVIL-209ENST00000482607 TRHP20396 242 aaPredicted RBP10.21□□□□□ -0.77
SVIL-209ENST00000482607 ZNF219Q9P2Y4 722 aaPredicted RBP10.18□□□□□ -0.78
SVIL-209ENST00000482607 SAMD1Q6SPF0 538 aaPredicted RBP10.16□□□□□ -0.78
SVIL-209ENST00000482607 ABCB7O75027 752 aa10.14□□□□□ -0.79
SVIL-209ENST00000482607 MYCNP04198 464 aaPredicted RBP10.07□□□□□ -0.8
SVIL-209ENST00000482607 SLC4A1APQ9BWU0 796 aaKnown RBP10.04□□□□□ -0.8
SVIL-209ENST00000482607 POTEHQ6S545 545 aa9.97□□□□□ -0.81
SVIL-209ENST00000482607 POLA2Q14181 598 aa9.95□□□□□ -0.82
SVIL-209ENST00000482607 FOXD4L1Q9NU39 408 aa9.95□□□□□ -0.82
SVIL-209ENST00000482607 ATF5Q9Y2D1 282 aaPredicted RBP9.88□□□□□ -0.83
SVIL-209ENST00000482607 RBM42Q9BTD8 480 aaKnown RBP9.85□□□□□ -0.83
SVIL-209ENST00000482607 ZBTB22O15209 634 aa9.81□□□□□ -0.84
SVIL-209ENST00000482607 ZBTB12Q9Y330 459 aaPredicted RBP9.71□□□□□ -0.86
SVIL-209ENST00000482607 CHRDL2Q6WN34 429 aa9.67□□□□□ -0.86
SVIL-209ENST00000482607 ATXN8OSP0DMR3 200 aa9.66□□□□□ -0.86
SVIL-209ENST00000482607 AKT1S1Q96B36 256 aa9.64□□□□□ -0.87
SVIL-209ENST00000482607 OSCARQ8IYS5 282 aa9.6□□□□□ -0.87
SVIL-209ENST00000482607 REM2Q8IYK8 340 aaPredicted RBP9.56□□□□□ -0.88
SVIL-209ENST00000482607 FBLN2P98095 1184 aa9.46□□□□□ -0.9
SVIL-209ENST00000482607 PITPNM1O00562 1244 aa9.44□□□□□ -0.9
SVIL-209ENST00000482607 PIP4P2Q8N4L2 257 aa9.44□□□□□ -0.9
SVIL-209ENST00000482607 MKRN4PQ13434 485 aaPredicted RBP9.42□□□□□ -0.9
SVIL-209ENST00000482607 SPDYE2BA6NHP3 402 aa9.41□□□□□ -0.9
SVIL-209ENST00000482607 SPDYE6P0CI01 402 aa9.41□□□□□ -0.9
SVIL-209ENST00000482607 SPDYE2Q495Y8 402 aa9.41□□□□□ -0.9
SVIL-209ENST00000482607 FXR2P51116 673 aaKnown RBP eCLIP9.39□□□□□ -0.915e-6■■■■□ 19.3
SVIL-209ENST00000482607 SP7Q8TDD2 431 aaPredicted RBP9.32□□□□□ -0.92
SVIL-209ENST00000482607 CSRNP3Q8WYN3 585 aa9.32□□□□□ -0.92
SVIL-209ENST00000482607 ZNF692Q9BU19 519 aaPredicted RBP9.31□□□□□ -0.92
SVIL-209ENST00000482607 SSUH2Q9Y2M2 353 aa9.3□□□□□ -0.92
SVIL-209ENST00000482607 HAX1O00165 279 aa9.28□□□□□ -0.92
SVIL-209ENST00000482607 SPDYE1Q8NFV5 336 aaPredicted RBP9.26□□□□□ -0.93
SVIL-209ENST00000482607 CLEC11AQ9Y240 323 aa9.25□□□□□ -0.93
SVIL-209ENST00000482607 PRKAR2AP13861 404 aaKnown RBP9.19□□□□□ -0.94
SVIL-209ENST00000482607 EVX2Q03828 476 aa9.19□□□□□ -0.94
SVIL-209ENST00000482607 PABPN1Q86U42 306 aaKnown RBP eCLIP9.17□□□□□ -0.94
SVIL-209ENST00000482607 EHMT2Q96KQ7 1210 aa9.14□□□□□ -0.95
SVIL-209ENST00000482607 PRR29P0C7W0 189 aa9.1□□□□□ -0.95
SVIL-209ENST00000482607 CHADLQ6NUI6 762 aa9.09□□□□□ -0.95
SVIL-209ENST00000482607 C19orf67A6NJJ6 358 aa9.08□□□□□ -0.96
SVIL-209ENST00000482607 GABBR2O75899 941 aa8.96□□□□□ -0.98
SVIL-209ENST00000482607 FARP1Q9Y4F1 1045 aaPredicted RBP8.96□□□□□ -0.98
SVIL-209ENST00000482607 SPDYE4A6NLX3 237 aa8.93□□□□□ -0.98
SVIL-209ENST00000482607 STAG3Q9UJ98 1225 aa8.9□□□□□ -0.98
SVIL-209ENST00000482607 CD44P16070 742 aaKnown RBP8.89□□□□□ -0.99
SVIL-209ENST00000482607 CREBZFQ9NS37 354 aa8.88□□□□□ -0.99
SVIL-209ENST00000482607 CLCN6P51797 869 aa8.8□□□□□ -1
SVIL-209ENST00000482607 POTEIP0CG38 1075 aa8.79□□□□□ -1
SVIL-209ENST00000482607 ZRANB1Q9UGI0 708 aa8.77□□□□□ -1.01
SVIL-209ENST00000482607 ZNF579Q8NAF0 562 aaKnown RBP8.76□□□□□ -1.01
SVIL-209ENST00000482607 LHX8Q68G74 356 aa8.75□□□□□ -1.01
SVIL-209ENST00000482607 MNX1P50219 401 aaPredicted RBP8.73□□□□□ -1.01
SVIL-209ENST00000482607 PROM2Q8N271 834 aa8.72□□□□□ -1.01
SVIL-209ENST00000482607 NPM1P06748 294 aaKnown RBP eCLIP8.69□□□□□ -1.02
SVIL-209ENST00000482607 DCBLD2Q96PD2 775 aa8.69□□□□□ -1.02
SVIL-209ENST00000482607 GALR2O43603 387 aaPredicted RBP8.66□□□□□ -1.02
SVIL-209ENST00000482607 PAK3O75914 559 aaPredicted RBP8.66□□□□□ -1.02
SVIL-209ENST00000482607 PHF12Q96QT6 1004 aa8.64□□□□□ -1.03
SVIL-209ENST00000482607 MIER1Q8N108 512 aa8.54□□□□□ -1.04
SVIL-209ENST00000482607 TSPYL2Q9H2G4 693 aaPredicted RBP8.54□□□□□ -1.04
SVIL-209ENST00000482607 PELP1Q8IZL8 1130 aaKnown RBP8.53□□□□□ -1.04
SVIL-209ENST00000482607 MS4A3Q96HJ5 214 aa8.52□□□□□ -1.05
SVIL-209ENST00000482607 CCDC61Q9Y6R9 512 aa8.51□□□□□ -1.05
SVIL-209ENST00000482607 POTEB2H3BUK9 544 aa8.5□□□□□ -1.05
SVIL-209ENST00000482607 PLEKHG5O94827 1062 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms