RNA–Protein interactions for RNA: ENST00000482353.2

PRKCI-203, Transcript of protein kinase C iota, humanhuman

TSL 3

Gene PRKCI, Length 495 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCI-203ENST00000482353 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
PRKCI-203ENST00000482353 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
PRKCI-203ENST00000482353 SENP3Q9H4L4 574 aaPredicted RBP17.03■□□□□ 0.32
PRKCI-203ENST00000482353 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.28
PRKCI-203ENST00000482353 FOXD1Q16676 465 aa15.83■□□□□ 0.12
PRKCI-203ENST00000482353 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
PRKCI-203ENST00000482353 PIAS4Q8N2W9 510 aaPredicted RBP14.85□□□□□ -0.03
PRKCI-203ENST00000482353 MSH5O43196 834 aa14.84□□□□□ -0.03
PRKCI-203ENST00000482353 PPP6R1Q9UPN7 881 aa14.81□□□□□ -0.04
PRKCI-203ENST00000482353 ADRA2BP18089 450 aa14.78□□□□□ -0.04
PRKCI-203ENST00000482353 POTEDQ86YR6 584 aa14.35□□□□□ -0.11
PRKCI-203ENST00000482353 SCAF1Q9H7N4 1312 aaKnown RBP13.57□□□□□ -0.24
PRKCI-203ENST00000482353 MAPK8IP2Q13387 824 aaPredicted RBP13.54□□□□□ -0.24
PRKCI-203ENST00000482353 DMRT2Q9Y5R5 561 aa13.5□□□□□ -0.25
PRKCI-203ENST00000482353 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
PRKCI-203ENST00000482353 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
PRKCI-203ENST00000482353 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
PRKCI-203ENST00000482353 DCAF8L1A6NGE4 600 aa12.96□□□□□ -0.33
PRKCI-203ENST00000482353 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
PRKCI-203ENST00000482353 NCBP3Q53F19 620 aaKnown RBP12.87□□□□□ -0.35
PRKCI-203ENST00000482353 CACNB1Q02641 598 aaPredicted RBP12.68□□□□□ -0.38
PRKCI-203ENST00000482353 NPM3O75607 178 aaKnown RBP12.66□□□□□ -0.38
PRKCI-203ENST00000482353 RNF39Q9H2S5 420 aa12.64□□□□□ -0.39
PRKCI-203ENST00000482353 DNAJC5BQ9UF47 199 aa12.57□□□□□ -0.4
PRKCI-203ENST00000482353 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
PRKCI-203ENST00000482353 KCNA4P22459 653 aa12.46□□□□□ -0.41
PRKCI-203ENST00000482353 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.42□□□□□ -0.42
PRKCI-203ENST00000482353 U3KPZ7 1027 aaPredicted RBP12.16□□□□□ -0.46
PRKCI-203ENST00000482353 SLC4A2P04920 1241 aa12.05□□□□□ -0.48
PRKCI-203ENST00000482353 CAPN15O75808 1086 aa11.95□□□□□ -0.5
PRKCI-203ENST00000482353 SPINK5Q9NQ38 1064 aaPredicted RBP11.95□□□□□ -0.5
PRKCI-203ENST00000482353 APLP2Q06481 763 aa11.88□□□□□ -0.51
PRKCI-203ENST00000482353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.86□□□□□ -0.51
PRKCI-203ENST00000482353 HNRNPUL2Q1KMD3 747 aaKnown RBP11.86□□□□□ -0.51
PRKCI-203ENST00000482353 DSG3P32926 999 aa11.85□□□□□ -0.51
PRKCI-203ENST00000482353 SAMD1Q6SPF0 538 aaPredicted RBP11.8□□□□□ -0.52
PRKCI-203ENST00000482353 SLC4A1APQ9BWU0 796 aaKnown RBP11.79□□□□□ -0.52
PRKCI-203ENST00000482353 ZNF219Q9P2Y4 722 aaPredicted RBP11.78□□□□□ -0.52
PRKCI-203ENST00000482353 TRHP20396 242 aaPredicted RBP11.77□□□□□ -0.53
PRKCI-203ENST00000482353 MYCNP04198 464 aaPredicted RBP11.74□□□□□ -0.53
PRKCI-203ENST00000482353 ABCB7O75027 752 aa11.68□□□□□ -0.54
PRKCI-203ENST00000482353 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
PRKCI-203ENST00000482353 ZBTB22O15209 634 aa11.46□□□□□ -0.57
PRKCI-203ENST00000482353 POLA2Q14181 598 aa11.45□□□□□ -0.58
PRKCI-203ENST00000482353 ATF5Q9Y2D1 282 aaPredicted RBP11.41□□□□□ -0.58
PRKCI-203ENST00000482353 RBM42Q9BTD8 480 aaKnown RBP11.35□□□□□ -0.59
PRKCI-203ENST00000482353 ZBTB12Q9Y330 459 aaPredicted RBP11.28□□□□□ -0.6
PRKCI-203ENST00000482353 ATXN8OSP0DMR3 200 aa11.27□□□□□ -0.61
PRKCI-203ENST00000482353 POTEHQ6S545 545 aa11.27□□□□□ -0.61
PRKCI-203ENST00000482353 OSCARQ8IYS5 282 aa11.12□□□□□ -0.63
PRKCI-203ENST00000482353 AKT1S1Q96B36 256 aa11.07□□□□□ -0.64
PRKCI-203ENST00000482353 CHRDL2Q6WN34 429 aa11.05□□□□□ -0.64
PRKCI-203ENST00000482353 FBLN2P98095 1184 aa11.02□□□□□ -0.65
PRKCI-203ENST00000482353 CSRNP3Q8WYN3 585 aa10.96□□□□□ -0.65
PRKCI-203ENST00000482353 REM2Q8IYK8 340 aaPredicted RBP10.95□□□□□ -0.66
PRKCI-203ENST00000482353 SPDYE2BA6NHP3 402 aa10.91□□□□□ -0.66
PRKCI-203ENST00000482353 SPDYE6P0CI01 402 aa10.91□□□□□ -0.66
PRKCI-203ENST00000482353 SPDYE2Q495Y8 402 aa10.91□□□□□ -0.66
PRKCI-203ENST00000482353 MKRN4PQ13434 485 aaPredicted RBP10.9□□□□□ -0.66
PRKCI-203ENST00000482353 EHMT2Q96KQ7 1210 aa10.9□□□□□ -0.66
PRKCI-203ENST00000482353 PITPNM1O00562 1244 aa10.86□□□□□ -0.67
PRKCI-203ENST00000482353 PIP4P2Q8N4L2 257 aa10.79□□□□□ -0.68
PRKCI-203ENST00000482353 ZNF692Q9BU19 519 aaPredicted RBP10.77□□□□□ -0.69
PRKCI-203ENST00000482353 SSUH2Q9Y2M2 353 aa10.77□□□□□ -0.69
PRKCI-203ENST00000482353 FXR2P51116 673 aaKnown RBP eCLIP10.73□□□□□ -0.69
PRKCI-203ENST00000482353 SPDYE1Q8NFV5 336 aaPredicted RBP10.71□□□□□ -0.69
PRKCI-203ENST00000482353 CLEC11AQ9Y240 323 aa10.67□□□□□ -0.7
PRKCI-203ENST00000482353 PABPN1Q86U42 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
PRKCI-203ENST00000482353 SP7Q8TDD2 431 aaPredicted RBP10.6□□□□□ -0.71
PRKCI-203ENST00000482353 HAX1O00165 279 aa10.58□□□□□ -0.72
PRKCI-203ENST00000482353 PRKAR2AP13861 404 aaKnown RBP10.57□□□□□ -0.72
PRKCI-203ENST00000482353 PRR29P0C7W0 189 aa10.5□□□□□ -0.73
PRKCI-203ENST00000482353 CHADLQ6NUI6 762 aa10.45□□□□□ -0.74
PRKCI-203ENST00000482353 SPDYE4A6NLX3 237 aa10.44□□□□□ -0.74
PRKCI-203ENST00000482353 EVX2Q03828 476 aa10.41□□□□□ -0.74
PRKCI-203ENST00000482353 C19orf67A6NJJ6 358 aa10.39□□□□□ -0.75
PRKCI-203ENST00000482353 STAG3Q9UJ98 1225 aa10.35□□□□□ -0.75
PRKCI-203ENST00000482353 FARP1Q9Y4F1 1045 aaPredicted RBP10.31□□□□□ -0.76
PRKCI-203ENST00000482353 CD44P16070 742 aaKnown RBP10.25□□□□□ -0.77
PRKCI-203ENST00000482353 CREBZFQ9NS37 354 aa10.25□□□□□ -0.77
PRKCI-203ENST00000482353 GABBR2O75899 941 aa10.21□□□□□ -0.77
PRKCI-203ENST00000482353 PROM2Q8N271 834 aa10.19□□□□□ -0.78
PRKCI-203ENST00000482353 ZNF579Q8NAF0 562 aaKnown RBP10.11□□□□□ -0.79
PRKCI-203ENST00000482353 ZRANB1Q9UGI0 708 aa10.11□□□□□ -0.79
PRKCI-203ENST00000482353 CLCN6P51797 869 aa10.1□□□□□ -0.79
PRKCI-203ENST00000482353 NPM1P06748 294 aaKnown RBP eCLIP10.09□□□□□ -0.79
PRKCI-203ENST00000482353 PAK3O75914 559 aaPredicted RBP10.08□□□□□ -0.8
PRKCI-203ENST00000482353 MNX1P50219 401 aaPredicted RBP10.07□□□□□ -0.8
PRKCI-203ENST00000482353 POTEIP0CG38 1075 aa9.98□□□□□ -0.81
PRKCI-203ENST00000482353 FKBP8Q14318 412 aa9.98□□□□□ -0.81
PRKCI-203ENST00000482353 DCBLD2Q96PD2 775 aa9.98□□□□□ -0.81
PRKCI-203ENST00000482353 PLEKHG5O94827 1062 aa9.97□□□□□ -0.81
PRKCI-203ENST00000482353 PHF12Q96QT6 1004 aa9.97□□□□□ -0.81
PRKCI-203ENST00000482353 GALR2O43603 387 aaPredicted RBP9.95□□□□□ -0.82
PRKCI-203ENST00000482353 MIER1Q8N108 512 aa9.93□□□□□ -0.82
PRKCI-203ENST00000482353 LHX8Q68G74 356 aa9.92□□□□□ -0.82
PRKCI-203ENST00000482353 PLCD3Q8N3E9 789 aa9.89□□□□□ -0.83
PRKCI-203ENST00000482353 TSPYL2Q9H2G4 693 aaPredicted RBP9.89□□□□□ -0.83
PRKCI-203ENST00000482353 MS4A3Q96HJ5 214 aa9.85□□□□□ -0.83
PRKCI-203ENST00000482353 CCDC61Q9Y6R9 512 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms