RNA–Protein interactions for RNA: ENST00000482124.1

CTTNBP2-211, Transcript of cortactin binding protein 2, humanhuman

TSL 4

Gene CTTNBP2, Length 521 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2-211ENST00000482124 AEBP2Q6ZN18 517 aaPredicted RBP31■■■□□ 2.55
CTTNBP2-211ENST00000482124 CHIC1Q5VXU3 224 aa29.71■■■□□ 2.35
CTTNBP2-211ENST00000482124 SENP3Q9H4L4 574 aaPredicted RBP26.28■■□□□ 1.8
CTTNBP2-211ENST00000482124 PHF23Q9BUL5 403 aaPredicted RBP26.15■■□□□ 1.78
CTTNBP2-211ENST00000482124 FOXD1Q16676 465 aa24.54■■□□□ 1.52
CTTNBP2-211ENST00000482124 PLPPR3Q6T4P5 718 aa23.88■■□□□ 1.41
CTTNBP2-211ENST00000482124 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
CTTNBP2-211ENST00000482124 ADRA2BP18089 450 aa23.24■■□□□ 1.31
CTTNBP2-211ENST00000482124 PIAS4Q8N2W9 510 aaPredicted RBP23.03■■□□□ 1.28
CTTNBP2-211ENST00000482124 MSH5O43196 834 aa22.72■■□□□ 1.23
CTTNBP2-211ENST00000482124 POTEDQ86YR6 584 aa21.66■■□□□ 1.06
CTTNBP2-211ENST00000482124 MAPK8IP2Q13387 824 aaPredicted RBP21.26■□□□□ 0.99
CTTNBP2-211ENST00000482124 SCAF1Q9H7N4 1312 aaKnown RBP21.1■□□□□ 0.97
CTTNBP2-211ENST00000482124 PPP4R3CPQ6ZMV5 832 aa21.05■□□□□ 0.96
CTTNBP2-211ENST00000482124 DMRT2Q9Y5R5 561 aa20.9■□□□□ 0.94
CTTNBP2-211ENST00000482124 CNKSR2Q8WXI2 1034 aa20.51■□□□□ 0.87
CTTNBP2-211ENST00000482124 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
CTTNBP2-211ENST00000482124 HOXD11P31277 338 aaPredicted RBP20.26■□□□□ 0.83
CTTNBP2-211ENST00000482124 RNF216Q9NWF9 866 aaPredicted RBP20.21■□□□□ 0.83
CTTNBP2-211ENST00000482124 DCAF8L1A6NGE4 600 aa20.19■□□□□ 0.82
CTTNBP2-211ENST00000482124 NPM3O75607 178 aaKnown RBP20.04■□□□□ 0.8
CTTNBP2-211ENST00000482124 KCNA4P22459 653 aa20.04■□□□□ 0.8
CTTNBP2-211ENST00000482124 RNF39Q9H2S5 420 aa19.45■□□□□ 0.7
CTTNBP2-211ENST00000482124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.39■□□□□ 0.69
CTTNBP2-211ENST00000482124 CACNB1Q02641 598 aaPredicted RBP19.38■□□□□ 0.69
CTTNBP2-211ENST00000482124 DNAJC5BQ9UF47 199 aa19.35■□□□□ 0.69
CTTNBP2-211ENST00000482124 C1QBPQ07021 282 aaKnown RBP19.15■□□□□ 0.66
CTTNBP2-211ENST00000482124 SLC4A2P04920 1241 aa19.06■□□□□ 0.64
CTTNBP2-211ENST00000482124 U3KPZ7 1027 aaPredicted RBP19.01■□□□□ 0.63
CTTNBP2-211ENST00000482124 SLC4A1APQ9BWU0 796 aaKnown RBP18.95■□□□□ 0.62
CTTNBP2-211ENST00000482124 SPINK5Q9NQ38 1064 aaPredicted RBP18.69■□□□□ 0.58
CTTNBP2-211ENST00000482124 CAPN15O75808 1086 aa18.62■□□□□ 0.57
CTTNBP2-211ENST00000482124 FOXD4L1Q9NU39 408 aa18.5■□□□□ 0.55
CTTNBP2-211ENST00000482124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
CTTNBP2-211ENST00000482124 MYCNP04198 464 aaPredicted RBP18.48■□□□□ 0.55
CTTNBP2-211ENST00000482124 HNRNPUL2Q1KMD3 747 aaKnown RBP18.48■□□□□ 0.55
CTTNBP2-211ENST00000482124 TRHP20396 242 aaPredicted RBP18.44■□□□□ 0.54
CTTNBP2-211ENST00000482124 ZBTB22O15209 634 aa18.43■□□□□ 0.54
CTTNBP2-211ENST00000482124 SAMD1Q6SPF0 538 aaPredicted RBP18.42■□□□□ 0.54
CTTNBP2-211ENST00000482124 DSG3P32926 999 aa18.38■□□□□ 0.53
CTTNBP2-211ENST00000482124 APLP2Q06481 763 aa18.38■□□□□ 0.53
CTTNBP2-211ENST00000482124 ZNF219Q9P2Y4 722 aaPredicted RBP18.28■□□□□ 0.52
CTTNBP2-211ENST00000482124 ABCB7O75027 752 aa18.27■□□□□ 0.52
CTTNBP2-211ENST00000482124 ATF5Q9Y2D1 282 aaPredicted RBP18.16■□□□□ 0.5
CTTNBP2-211ENST00000482124 POLA2Q14181 598 aa17.99■□□□□ 0.47
CTTNBP2-211ENST00000482124 EHMT2Q96KQ7 1210 aa17.94■□□□□ 0.46
CTTNBP2-211ENST00000482124 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
CTTNBP2-211ENST00000482124 ATXN8OSP0DMR3 200 aa17.81■□□□□ 0.44
CTTNBP2-211ENST00000482124 ZBTB12Q9Y330 459 aaPredicted RBP17.5■□□□□ 0.39
CTTNBP2-211ENST00000482124 RBM42Q9BTD8 480 aaKnown RBP17.44■□□□□ 0.38
CTTNBP2-211ENST00000482124 OSCARQ8IYS5 282 aa17.41■□□□□ 0.38
CTTNBP2-211ENST00000482124 FBLN2P98095 1184 aa17.31■□□□□ 0.36
CTTNBP2-211ENST00000482124 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
CTTNBP2-211ENST00000482124 AKT1S1Q96B36 256 aa17.15■□□□□ 0.34
CTTNBP2-211ENST00000482124 SPDYE2BA6NHP3 402 aa17.04■□□□□ 0.32
CTTNBP2-211ENST00000482124 SPDYE6P0CI01 402 aa17.04■□□□□ 0.32
CTTNBP2-211ENST00000482124 SPDYE2Q495Y8 402 aa17.04■□□□□ 0.32
CTTNBP2-211ENST00000482124 POTEHQ6S545 545 aa17.04■□□□□ 0.32
CTTNBP2-211ENST00000482124 REM2Q8IYK8 340 aaPredicted RBP17.04■□□□□ 0.32
CTTNBP2-211ENST00000482124 CHRDL2Q6WN34 429 aa16.99■□□□□ 0.31
CTTNBP2-211ENST00000482124 ZNF692Q9BU19 519 aaPredicted RBP16.97■□□□□ 0.31
CTTNBP2-211ENST00000482124 PITPNM1O00562 1244 aa16.87■□□□□ 0.29
CTTNBP2-211ENST00000482124 SSUH2Q9Y2M2 353 aa16.85■□□□□ 0.29
CTTNBP2-211ENST00000482124 PABPN1Q86U42 306 aaKnown RBP eCLIP16.76■□□□□ 0.27
CTTNBP2-211ENST00000482124 CLEC11AQ9Y240 323 aa16.76■□□□□ 0.27
CTTNBP2-211ENST00000482124 PIP4P2Q8N4L2 257 aa16.69■□□□□ 0.26
CTTNBP2-211ENST00000482124 SPDYE1Q8NFV5 336 aaPredicted RBP16.67■□□□□ 0.26
CTTNBP2-211ENST00000482124 SPDYE4A6NLX3 237 aa16.64■□□□□ 0.25
CTTNBP2-211ENST00000482124 FXR2P51116 673 aaKnown RBP eCLIP16.6■□□□□ 0.25
CTTNBP2-211ENST00000482124 PRR29P0C7W0 189 aa16.47■□□□□ 0.23
CTTNBP2-211ENST00000482124 PRKAR2AP13861 404 aaKnown RBP16.45■□□□□ 0.22
CTTNBP2-211ENST00000482124 CHADLQ6NUI6 762 aa16.41■□□□□ 0.22
CTTNBP2-211ENST00000482124 HAX1O00165 279 aa16.32■□□□□ 0.2
CTTNBP2-211ENST00000482124 STAG3Q9UJ98 1225 aa16.26■□□□□ 0.19
CTTNBP2-211ENST00000482124 FKBP8Q14318 412 aa16.24■□□□□ 0.19
CTTNBP2-211ENST00000482124 PROM2Q8N271 834 aa16.2■□□□□ 0.18
CTTNBP2-211ENST00000482124 EVX2Q03828 476 aa16.19■□□□□ 0.18
CTTNBP2-211ENST00000482124 CREBZFQ9NS37 354 aa16.14■□□□□ 0.17
CTTNBP2-211ENST00000482124 SP7Q8TDD2 431 aaPredicted RBP16.12■□□□□ 0.17
CTTNBP2-211ENST00000482124 FARP1Q9Y4F1 1045 aaPredicted RBP16.11■□□□□ 0.17
CTTNBP2-211ENST00000482124 C19orf67A6NJJ6 358 aa16.05■□□□□ 0.16
CTTNBP2-211ENST00000482124 CD44P16070 742 aaKnown RBP15.94■□□□□ 0.14
CTTNBP2-211ENST00000482124 MNX1P50219 401 aaPredicted RBP15.88■□□□□ 0.13
CTTNBP2-211ENST00000482124 MIER1Q8N108 512 aa15.87■□□□□ 0.13
CTTNBP2-211ENST00000482124 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
CTTNBP2-211ENST00000482124 ZRANB1Q9UGI0 708 aa15.8■□□□□ 0.12
CTTNBP2-211ENST00000482124 GABBR2O75899 941 aa15.78■□□□□ 0.12
CTTNBP2-211ENST00000482124 PLCD3Q8N3E9 789 aa15.78■□□□□ 0.12
CTTNBP2-211ENST00000482124 PLEKHG5O94827 1062 aa15.74■□□□□ 0.11
CTTNBP2-211ENST00000482124 PAK3O75914 559 aaPredicted RBP15.67■□□□□ 0.1
CTTNBP2-211ENST00000482124 TSPYL2Q9H2G4 693 aaPredicted RBP15.66■□□□□ 0.1
CTTNBP2-211ENST00000482124 FBXO3Q9UK99 471 aa15.66■□□□□ 0.1
CTTNBP2-211ENST00000482124 ZNF579Q8NAF0 562 aaKnown RBP15.65■□□□□ 0.1
CTTNBP2-211ENST00000482124 PHF12Q96QT6 1004 aa15.63■□□□□ 0.09
CTTNBP2-211ENST00000482124 RASEFQ8IZ41 740 aa15.56■□□□□ 0.08
CTTNBP2-211ENST00000482124 GALR2O43603 387 aaPredicted RBP15.53■□□□□ 0.08
CTTNBP2-211ENST00000482124 VASPP50552 380 aaPredicted RBP15.53■□□□□ 0.08
CTTNBP2-211ENST00000482124 ZBTB47Q9UFB7 747 aaPredicted RBP15.51■□□□□ 0.07
CTTNBP2-211ENST00000482124 POTEIP0CG38 1075 aa15.47■□□□□ 0.07
CTTNBP2-211ENST00000482124 CLCN6P51797 869 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms