RNA–Protein interactions for RNA: ENST00000482051.5

PGAP1-210, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 4

Gene PGAP1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-210ENST00000482051 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
PGAP1-210ENST00000482051 CHIC1Q5VXU3 224 aa21.57■■□□□ 1.04
PGAP1-210ENST00000482051 SENP3Q9H4L4 574 aaPredicted RBP19.63■□□□□ 0.73
PGAP1-210ENST00000482051 PHF23Q9BUL5 403 aaPredicted RBP19.38■□□□□ 0.69
PGAP1-210ENST00000482051 FOXD1Q16676 465 aa18.39■□□□□ 0.53
PGAP1-210ENST00000482051 POTEDQ86YR6 584 aa17.62■□□□□ 0.41
PGAP1-210ENST00000482051 PLPPR3Q6T4P5 718 aa17.33■□□□□ 0.36
PGAP1-210ENST00000482051 MSH5O43196 834 aa17.32■□□□□ 0.36
PGAP1-210ENST00000482051 PIAS4Q8N2W9 510 aaPredicted RBP17.11■□□□□ 0.33
PGAP1-210ENST00000482051 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
PGAP1-210ENST00000482051 ADRA2BP18089 450 aa16.87■□□□□ 0.29
PGAP1-210ENST00000482051 MAPK8IP2Q13387 824 aaPredicted RBP15.63■□□□□ 0.09
PGAP1-210ENST00000482051 DMRT2Q9Y5R5 561 aa15.49■□□□□ 0.07
PGAP1-210ENST00000482051 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
PGAP1-210ENST00000482051 PPP4R3CPQ6ZMV5 832 aa15.26■□□□□ 0.03
PGAP1-210ENST00000482051 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
PGAP1-210ENST00000482051 DCAF8L1A6NGE4 600 aa15.06■□□□□ 0
PGAP1-210ENST00000482051 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
PGAP1-210ENST00000482051 HOXD11P31277 338 aaPredicted RBP14.75□□□□□ -0.05
PGAP1-210ENST00000482051 RNF39Q9H2S5 420 aa14.74□□□□□ -0.05
PGAP1-210ENST00000482051 NCBP3Q53F19 620 aaKnown RBP14.69□□□□□ -0.06
PGAP1-210ENST00000482051 RNF216Q9NWF9 866 aaPredicted RBP14.66□□□□□ -0.06
PGAP1-210ENST00000482051 NPM3O75607 178 aaKnown RBP14.56□□□□□ -0.08
PGAP1-210ENST00000482051 KCNA4P22459 653 aa14.56□□□□□ -0.08
PGAP1-210ENST00000482051 C1QBPQ07021 282 aaKnown RBP14.5□□□□□ -0.09
PGAP1-210ENST00000482051 DNAJC5BQ9UF47 199 aa14.22□□□□□ -0.13
PGAP1-210ENST00000482051 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.14
PGAP1-210ENST00000482051 SLC4A2P04920 1241 aa13.85□□□□□ -0.19
PGAP1-210ENST00000482051 U3KPZ7 1027 aaPredicted RBP13.82□□□□□ -0.2
PGAP1-210ENST00000482051 CAPN15O75808 1086 aa13.77□□□□□ -0.21
PGAP1-210ENST00000482051 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.21
PGAP1-210ENST00000482051 POTEHQ6S545 545 aa13.74□□□□□ -0.21
PGAP1-210ENST00000482051 SPINK5Q9NQ38 1064 aaPredicted RBP13.74□□□□□ -0.21
PGAP1-210ENST00000482051 DSG3P32926 999 aa13.69□□□□□ -0.22
PGAP1-210ENST00000482051 TRHP20396 242 aaPredicted RBP13.47□□□□□ -0.25
PGAP1-210ENST00000482051 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
PGAP1-210ENST00000482051 ZBTB22O15209 634 aa13.42□□□□□ -0.26
PGAP1-210ENST00000482051 ABCB7O75027 752 aa13.42□□□□□ -0.26
PGAP1-210ENST00000482051 MYCNP04198 464 aaPredicted RBP13.42□□□□□ -0.26
PGAP1-210ENST00000482051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
PGAP1-210ENST00000482051 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
PGAP1-210ENST00000482051 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
PGAP1-210ENST00000482051 APLP2Q06481 763 aa13.33□□□□□ -0.28
PGAP1-210ENST00000482051 ZNF219Q9P2Y4 722 aaPredicted RBP13.32□□□□□ -0.28
PGAP1-210ENST00000482051 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
PGAP1-210ENST00000482051 EHMT2Q96KQ7 1210 aa13.07□□□□□ -0.32
PGAP1-210ENST00000482051 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
PGAP1-210ENST00000482051 POLA2Q14181 598 aa13.04□□□□□ -0.32
PGAP1-210ENST00000482051 CSRNP3Q8WYN3 585 aa12.99□□□□□ -0.33
PGAP1-210ENST00000482051 CHRDL2Q6WN34 429 aa12.97□□□□□ -0.33
PGAP1-210ENST00000482051 ATXN8OSP0DMR3 200 aa12.91□□□□□ -0.34
PGAP1-210ENST00000482051 ZBTB12Q9Y330 459 aaPredicted RBP12.71□□□□□ -0.37
PGAP1-210ENST00000482051 OSCARQ8IYS5 282 aa12.68□□□□□ -0.38
PGAP1-210ENST00000482051 AKT1S1Q96B36 256 aa12.68□□□□□ -0.38
PGAP1-210ENST00000482051 SP7Q8TDD2 431 aaPredicted RBP12.67□□□□□ -0.38
PGAP1-210ENST00000482051 REM2Q8IYK8 340 aaPredicted RBP12.6□□□□□ -0.39
PGAP1-210ENST00000482051 MKRN4PQ13434 485 aaPredicted RBP12.57□□□□□ -0.4
PGAP1-210ENST00000482051 PIP4P2Q8N4L2 257 aa12.57□□□□□ -0.4
PGAP1-210ENST00000482051 FBLN2P98095 1184 aa12.56□□□□□ -0.4
PGAP1-210ENST00000482051 HAX1O00165 279 aa12.52□□□□□ -0.41
PGAP1-210ENST00000482051 PITPNM1O00562 1244 aa12.46□□□□□ -0.41
PGAP1-210ENST00000482051 FXR2P51116 673 aaKnown RBP eCLIP12.39□□□□□ -0.43
PGAP1-210ENST00000482051 SPDYE2BA6NHP3 402 aa12.36□□□□□ -0.43
PGAP1-210ENST00000482051 SPDYE6P0CI01 402 aa12.36□□□□□ -0.43
PGAP1-210ENST00000482051 SPDYE2Q495Y8 402 aa12.36□□□□□ -0.43
PGAP1-210ENST00000482051 EVX2Q03828 476 aa12.31□□□□□ -0.44
PGAP1-210ENST00000482051 ZNF692Q9BU19 519 aaPredicted RBP12.31□□□□□ -0.44
PGAP1-210ENST00000482051 SSUH2Q9Y2M2 353 aa12.25□□□□□ -0.45
PGAP1-210ENST00000482051 CLEC11AQ9Y240 323 aa12.2□□□□□ -0.46
PGAP1-210ENST00000482051 PRKAR2AP13861 404 aaKnown RBP12.17□□□□□ -0.46
PGAP1-210ENST00000482051 PABPN1Q86U42 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
PGAP1-210ENST00000482051 SPDYE1Q8NFV5 336 aaPredicted RBP12.1□□□□□ -0.47
PGAP1-210ENST00000482051 SPDYE4A6NLX3 237 aa12.08□□□□□ -0.48
PGAP1-210ENST00000482051 C19orf67A6NJJ6 358 aa12.02□□□□□ -0.49
PGAP1-210ENST00000482051 GABBR2O75899 941 aa11.99□□□□□ -0.49
PGAP1-210ENST00000482051 CHADLQ6NUI6 762 aa11.99□□□□□ -0.49
PGAP1-210ENST00000482051 PRR29P0C7W0 189 aa11.93□□□□□ -0.5
PGAP1-210ENST00000482051 LHX8Q68G74 356 aa11.92□□□□□ -0.5
PGAP1-210ENST00000482051 FKBP8Q14318 412 aa11.8□□□□□ -0.52
PGAP1-210ENST00000482051 PROM2Q8N271 834 aa11.77□□□□□ -0.53
PGAP1-210ENST00000482051 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.53
PGAP1-210ENST00000482051 CD44P16070 742 aaKnown RBP11.75□□□□□ -0.53
PGAP1-210ENST00000482051 POTEIP0CG38 1075 aa11.72□□□□□ -0.53
PGAP1-210ENST00000482051 CREBZFQ9NS37 354 aa11.72□□□□□ -0.53
PGAP1-210ENST00000482051 FARP1Q9Y4F1 1045 aaPredicted RBP11.71□□□□□ -0.53
PGAP1-210ENST00000482051 DCBLD2Q96PD2 775 aa11.62□□□□□ -0.55
PGAP1-210ENST00000482051 PLSCR2Q9NRY7 297 aa11.58□□□□□ -0.56
PGAP1-210ENST00000482051 CLCN6P51797 869 aa11.55□□□□□ -0.56
PGAP1-210ENST00000482051 ZRANB1Q9UGI0 708 aa11.55□□□□□ -0.56
PGAP1-210ENST00000482051 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
PGAP1-210ENST00000482051 MIER1Q8N108 512 aa11.5□□□□□ -0.57
PGAP1-210ENST00000482051 ZNF579Q8NAF0 562 aaKnown RBP11.48□□□□□ -0.57
PGAP1-210ENST00000482051 NPM1P06748 294 aaKnown RBP eCLIP11.45□□□□□ -0.58
PGAP1-210ENST00000482051 PLCD3Q8N3E9 789 aa11.45□□□□□ -0.58
PGAP1-210ENST00000482051 GALR2O43603 387 aaPredicted RBP11.44□□□□□ -0.58
PGAP1-210ENST00000482051 PLEKHG5O94827 1062 aa11.4□□□□□ -0.58
PGAP1-210ENST00000482051 PHF12Q96QT6 1004 aa11.38□□□□□ -0.59
PGAP1-210ENST00000482051 PAK3O75914 559 aaPredicted RBP11.37□□□□□ -0.59
PGAP1-210ENST00000482051 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
PGAP1-210ENST00000482051 TSPYL2Q9H2G4 693 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms