RNA–Protein interactions for RNA: ENST00000481766.1

NECTIN3-205, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-205ENST00000481766 AEBP2Q6ZN18 517 aaPredicted RBP27.59■■■□□ 2.01
NECTIN3-205ENST00000481766 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
NECTIN3-205ENST00000481766 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
NECTIN3-205ENST00000481766 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
NECTIN3-205ENST00000481766 FOXD1Q16676 465 aa21.9■■□□□ 1.1
NECTIN3-205ENST00000481766 PLPPR3Q6T4P5 718 aa21.46■■□□□ 1.03
NECTIN3-205ENST00000481766 PPP6R1Q9UPN7 881 aa20.68■□□□□ 0.9
NECTIN3-205ENST00000481766 ADRA2BP18089 450 aa20.67■□□□□ 0.9
NECTIN3-205ENST00000481766 PIAS4Q8N2W9 510 aaPredicted RBP20.6■□□□□ 0.89
NECTIN3-205ENST00000481766 MSH5O43196 834 aa20.47■□□□□ 0.87
NECTIN3-205ENST00000481766 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
NECTIN3-205ENST00000481766 SCAF1Q9H7N4 1312 aaKnown RBP19.08■□□□□ 0.65
NECTIN3-205ENST00000481766 MAPK8IP2Q13387 824 aaPredicted RBP18.88■□□□□ 0.61
NECTIN3-205ENST00000481766 PPP4R3CPQ6ZMV5 832 aa18.81■□□□□ 0.6
NECTIN3-205ENST00000481766 DMRT2Q9Y5R5 561 aa18.74■□□□□ 0.59
NECTIN3-205ENST00000481766 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
NECTIN3-205ENST00000481766 NCBP3Q53F19 620 aaKnown RBP18.29■□□□□ 0.52
NECTIN3-205ENST00000481766 HOXD11P31277 338 aaPredicted RBP18.17■□□□□ 0.5
NECTIN3-205ENST00000481766 RNF216Q9NWF9 866 aaPredicted RBP18.15■□□□□ 0.5
NECTIN3-205ENST00000481766 DCAF8L1A6NGE4 600 aa18.05■□□□□ 0.48
NECTIN3-205ENST00000481766 NPM3O75607 178 aaKnown RBP17.89■□□□□ 0.45
NECTIN3-205ENST00000481766 KCNA4P22459 653 aa17.82■□□□□ 0.44
NECTIN3-205ENST00000481766 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
NECTIN3-205ENST00000481766 RNF39Q9H2S5 420 aa17.43■□□□□ 0.38
NECTIN3-205ENST00000481766 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.4■□□□□ 0.38
NECTIN3-205ENST00000481766 CACNB1Q02641 598 aaPredicted RBP17.39■□□□□ 0.37
NECTIN3-205ENST00000481766 C1QBPQ07021 282 aaKnown RBP17.26■□□□□ 0.35
NECTIN3-205ENST00000481766 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
NECTIN3-205ENST00000481766 U3KPZ7 1027 aaPredicted RBP16.97■□□□□ 0.31
NECTIN3-205ENST00000481766 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.31
NECTIN3-205ENST00000481766 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.75■□□□□ 0.27
NECTIN3-205ENST00000481766 HNRNPUL2Q1KMD3 747 aaKnown RBP16.75■□□□□ 0.27
NECTIN3-205ENST00000481766 APLP2Q06481 763 aa16.71■□□□□ 0.27
NECTIN3-205ENST00000481766 CAPN15O75808 1086 aa16.68■□□□□ 0.26
NECTIN3-205ENST00000481766 SAMD1Q6SPF0 538 aaPredicted RBP16.64■□□□□ 0.25
NECTIN3-205ENST00000481766 SPINK5Q9NQ38 1064 aaPredicted RBP16.62■□□□□ 0.25
NECTIN3-205ENST00000481766 MYCNP04198 464 aaPredicted RBP16.6■□□□□ 0.25
NECTIN3-205ENST00000481766 FOXD4L1Q9NU39 408 aa16.59■□□□□ 0.25
NECTIN3-205ENST00000481766 TRHP20396 242 aaPredicted RBP16.48■□□□□ 0.23
NECTIN3-205ENST00000481766 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
NECTIN3-205ENST00000481766 DSG3P32926 999 aa16.43■□□□□ 0.22
NECTIN3-205ENST00000481766 ZBTB22O15209 634 aa16.32■□□□□ 0.2
NECTIN3-205ENST00000481766 ABCB7O75027 752 aa16.27■□□□□ 0.2
NECTIN3-205ENST00000481766 POLA2Q14181 598 aa16.09■□□□□ 0.17
NECTIN3-205ENST00000481766 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
NECTIN3-205ENST00000481766 ATXN8OSP0DMR3 200 aa16.07■□□□□ 0.16
NECTIN3-205ENST00000481766 EHMT2Q96KQ7 1210 aa15.94■□□□□ 0.14
NECTIN3-205ENST00000481766 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
NECTIN3-205ENST00000481766 ZBTB12Q9Y330 459 aaPredicted RBP15.86■□□□□ 0.13
NECTIN3-205ENST00000481766 RBM42Q9BTD8 480 aaKnown RBP15.78■□□□□ 0.12
NECTIN3-205ENST00000481766 FBLN2P98095 1184 aa15.6■□□□□ 0.09
NECTIN3-205ENST00000481766 OSCARQ8IYS5 282 aa15.52■□□□□ 0.08
NECTIN3-205ENST00000481766 AKT1S1Q96B36 256 aa15.44■□□□□ 0.06
NECTIN3-205ENST00000481766 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
NECTIN3-205ENST00000481766 SPDYE2BA6NHP3 402 aa15.35■□□□□ 0.05
NECTIN3-205ENST00000481766 SPDYE6P0CI01 402 aa15.35■□□□□ 0.05
NECTIN3-205ENST00000481766 SPDYE2Q495Y8 402 aa15.35■□□□□ 0.05
NECTIN3-205ENST00000481766 POTEHQ6S545 545 aa15.27■□□□□ 0.04
NECTIN3-205ENST00000481766 REM2Q8IYK8 340 aaPredicted RBP15.25■□□□□ 0.03
NECTIN3-205ENST00000481766 CHRDL2Q6WN34 429 aa15.24■□□□□ 0.03
NECTIN3-205ENST00000481766 ZNF692Q9BU19 519 aaPredicted RBP15.24■□□□□ 0.03
NECTIN3-205ENST00000481766 SSUH2Q9Y2M2 353 aa15.12■□□□□ 0.01
NECTIN3-205ENST00000481766 PITPNM1O00562 1244 aa15.07■□□□□ 0
NECTIN3-205ENST00000481766 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
NECTIN3-205ENST00000481766 CLEC11AQ9Y240 323 aa14.99□□□□□ -0.01
NECTIN3-205ENST00000481766 PABPN1Q86U42 306 aaKnown RBP eCLIP14.98□□□□□ -0.01
NECTIN3-205ENST00000481766 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
NECTIN3-205ENST00000481766 PIP4P2Q8N4L2 257 aa14.91□□□□□ -0.02
NECTIN3-205ENST00000481766 FXR2P51116 673 aaKnown RBP eCLIP14.88□□□□□ -0.03
NECTIN3-205ENST00000481766 PRR29P0C7W0 189 aa14.8□□□□□ -0.04
NECTIN3-205ENST00000481766 PRKAR2AP13861 404 aaKnown RBP14.73□□□□□ -0.05
NECTIN3-205ENST00000481766 STAG3Q9UJ98 1225 aa14.73□□□□□ -0.05
NECTIN3-205ENST00000481766 HAX1O00165 279 aa14.64□□□□□ -0.07
NECTIN3-205ENST00000481766 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
NECTIN3-205ENST00000481766 PROM2Q8N271 834 aa14.5□□□□□ -0.09
NECTIN3-205ENST00000481766 FKBP8Q14318 412 aa14.48□□□□□ -0.09
NECTIN3-205ENST00000481766 SP7Q8TDD2 431 aaPredicted RBP14.47□□□□□ -0.09
NECTIN3-205ENST00000481766 FARP1Q9Y4F1 1045 aaPredicted RBP14.44□□□□□ -0.1
NECTIN3-205ENST00000481766 CREBZFQ9NS37 354 aa14.4□□□□□ -0.1
NECTIN3-205ENST00000481766 C19orf67A6NJJ6 358 aa14.38□□□□□ -0.11
NECTIN3-205ENST00000481766 EVX2Q03828 476 aa14.34□□□□□ -0.11
NECTIN3-205ENST00000481766 PLEKHG5O94827 1062 aa14.29□□□□□ -0.12
NECTIN3-205ENST00000481766 CD44P16070 742 aaKnown RBP14.29□□□□□ -0.12
NECTIN3-205ENST00000481766 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
NECTIN3-205ENST00000481766 MIER1Q8N108 512 aa14.24□□□□□ -0.13
NECTIN3-205ENST00000481766 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
NECTIN3-205ENST00000481766 PLCD3Q8N3E9 789 aa14.18□□□□□ -0.14
NECTIN3-205ENST00000481766 FBXO3Q9UK99 471 aa14.18□□□□□ -0.14
NECTIN3-205ENST00000481766 MNX1P50219 401 aaPredicted RBP14.16□□□□□ -0.14
NECTIN3-205ENST00000481766 ZRANB1Q9UGI0 708 aa14.14□□□□□ -0.15
NECTIN3-205ENST00000481766 GABBR2O75899 941 aa14.11□□□□□ -0.15
NECTIN3-205ENST00000481766 CLCN6P51797 869 aa14.11□□□□□ -0.15
NECTIN3-205ENST00000481766 ZBTB47Q9UFB7 747 aaPredicted RBP14.08□□□□□ -0.16
NECTIN3-205ENST00000481766 ZNF579Q8NAF0 562 aaKnown RBP14.05□□□□□ -0.16
NECTIN3-205ENST00000481766 TSPYL2Q9H2G4 693 aaPredicted RBP13.97□□□□□ -0.17
NECTIN3-205ENST00000481766 PHF12Q96QT6 1004 aa13.92□□□□□ -0.18
NECTIN3-205ENST00000481766 VASPP50552 380 aaPredicted RBP13.91□□□□□ -0.18
NECTIN3-205ENST00000481766 DCBLD2Q96PD2 775 aa13.89□□□□□ -0.19
NECTIN3-205ENST00000481766 RASEFQ8IZ41 740 aa13.87□□□□□ -0.19
NECTIN3-205ENST00000481766 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms