RNA–Protein interactions for RNA: ENST00000481686.1

OTUD3-203, Transcript of OTU deubiquitinase 3, humanhuman

TSL 3

Gene OTUD3, Length 269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD3-203ENST00000481686 AEBP2Q6ZN18 517 aaPredicted RBP19.45■□□□□ 0.7
OTUD3-203ENST00000481686 CHIC1Q5VXU3 224 aa19.2■□□□□ 0.66
OTUD3-203ENST00000481686 PHF23Q9BUL5 403 aaPredicted RBP16.94■□□□□ 0.3
OTUD3-203ENST00000481686 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
OTUD3-203ENST00000481686 PLPPR3Q6T4P5 718 aa15.69■□□□□ 0.1
OTUD3-203ENST00000481686 FOXD1Q16676 465 aa15.24■□□□□ 0.03
OTUD3-203ENST00000481686 PPP6R1Q9UPN7 881 aa14.87□□□□□ -0.03
OTUD3-203ENST00000481686 ADRA2BP18089 450 aa14.86□□□□□ -0.03
OTUD3-203ENST00000481686 PIAS4Q8N2W9 510 aaPredicted RBP14.41□□□□□ -0.1
OTUD3-203ENST00000481686 MSH5O43196 834 aa13.94□□□□□ -0.18
OTUD3-203ENST00000481686 PPP4R3CPQ6ZMV5 832 aa13.86□□□□□ -0.19
OTUD3-203ENST00000481686 KCNA4P22459 653 aa13.81□□□□□ -0.2
OTUD3-203ENST00000481686 SCAF1Q9H7N4 1312 aaKnown RBP13.57□□□□□ -0.24
OTUD3-203ENST00000481686 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
OTUD3-203ENST00000481686 MAPK8IP2Q13387 824 aaPredicted RBP13.42□□□□□ -0.26
OTUD3-203ENST00000481686 CNKSR2Q8WXI2 1034 aa13.42□□□□□ -0.26
OTUD3-203ENST00000481686 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
OTUD3-203ENST00000481686 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
OTUD3-203ENST00000481686 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
OTUD3-203ENST00000481686 RNF216Q9NWF9 866 aaPredicted RBP13.1□□□□□ -0.31
OTUD3-203ENST00000481686 EHMT2Q96KQ7 1210 aa13.06□□□□□ -0.32
OTUD3-203ENST00000481686 HOXD11P31277 338 aaPredicted RBP13□□□□□ -0.33
OTUD3-203ENST00000481686 DNAJC5BQ9UF47 199 aa12.97□□□□□ -0.33
OTUD3-203ENST00000481686 CSRNP3Q8WYN3 585 aa12.85□□□□□ -0.35
OTUD3-203ENST00000481686 ZBTB22O15209 634 aa12.72□□□□□ -0.37
OTUD3-203ENST00000481686 FOXD4L1Q9NU39 408 aa12.63□□□□□ -0.39
OTUD3-203ENST00000481686 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
OTUD3-203ENST00000481686 DCAF8L1A6NGE4 600 aa12.55□□□□□ -0.4
OTUD3-203ENST00000481686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.36□□□□□ -0.43
OTUD3-203ENST00000481686 MYCNP04198 464 aaPredicted RBP12.33□□□□□ -0.44
OTUD3-203ENST00000481686 POTEDQ86YR6 584 aa12.3□□□□□ -0.44
OTUD3-203ENST00000481686 U3KPZ7 1027 aaPredicted RBP12.21□□□□□ -0.45
OTUD3-203ENST00000481686 ATXN8OSP0DMR3 200 aa12.18□□□□□ -0.46
OTUD3-203ENST00000481686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
OTUD3-203ENST00000481686 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
OTUD3-203ENST00000481686 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
OTUD3-203ENST00000481686 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
OTUD3-203ENST00000481686 RNF39Q9H2S5 420 aa11.99□□□□□ -0.49
OTUD3-203ENST00000481686 APLP2Q06481 763 aa11.91□□□□□ -0.5
OTUD3-203ENST00000481686 C1QBPQ07021 282 aaKnown RBP11.85□□□□□ -0.51
OTUD3-203ENST00000481686 SPINK5Q9NQ38 1064 aaPredicted RBP11.8□□□□□ -0.52
OTUD3-203ENST00000481686 ZNF219Q9P2Y4 722 aaPredicted RBP11.79□□□□□ -0.52
OTUD3-203ENST00000481686 CAPN15O75808 1086 aa11.72□□□□□ -0.53
OTUD3-203ENST00000481686 TRHP20396 242 aaPredicted RBP11.72□□□□□ -0.53
OTUD3-203ENST00000481686 POLA2Q14181 598 aa11.6□□□□□ -0.55
OTUD3-203ENST00000481686 FKBP8Q14318 412 aa11.57□□□□□ -0.56
OTUD3-203ENST00000481686 ABCB7O75027 752 aa11.52□□□□□ -0.57
OTUD3-203ENST00000481686 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
OTUD3-203ENST00000481686 DSG3P32926 999 aa11.5□□□□□ -0.57
OTUD3-203ENST00000481686 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
OTUD3-203ENST00000481686 FBLN2P98095 1184 aa11.45□□□□□ -0.58
OTUD3-203ENST00000481686 ZBTB12Q9Y330 459 aaPredicted RBP11.4□□□□□ -0.58
OTUD3-203ENST00000481686 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
OTUD3-203ENST00000481686 PROM2Q8N271 834 aa11.21□□□□□ -0.61
OTUD3-203ENST00000481686 OSCARQ8IYS5 282 aa11.19□□□□□ -0.62
OTUD3-203ENST00000481686 SPDYE2BA6NHP3 402 aa11.13□□□□□ -0.63
OTUD3-203ENST00000481686 SPDYE6P0CI01 402 aa11.13□□□□□ -0.63
OTUD3-203ENST00000481686 SPDYE2Q495Y8 402 aa11.13□□□□□ -0.63
OTUD3-203ENST00000481686 ZNF692Q9BU19 519 aaPredicted RBP11.12□□□□□ -0.63
OTUD3-203ENST00000481686 FBXO3Q9UK99 471 aa11.09□□□□□ -0.63
OTUD3-203ENST00000481686 SSUH2Q9Y2M2 353 aa11.08□□□□□ -0.64
OTUD3-203ENST00000481686 PABPN1Q86U42 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
OTUD3-203ENST00000481686 AMER1Q5JTC6 1135 aaPredicted RBP10.95□□□□□ -0.66
OTUD3-203ENST00000481686 VASPP50552 380 aaPredicted RBP10.94□□□□□ -0.66
OTUD3-203ENST00000481686 RTN4Q9NQC3 1192 aaKnown RBP10.94□□□□□ -0.66
OTUD3-203ENST00000481686 RBM42Q9BTD8 480 aaKnown RBP10.91□□□□□ -0.66
OTUD3-203ENST00000481686 STAG3Q9UJ98 1225 aa10.86□□□□□ -0.67
OTUD3-203ENST00000481686 AKT1S1Q96B36 256 aa10.85□□□□□ -0.67
OTUD3-203ENST00000481686 IFNLR1Q8IU57 520 aaPredicted RBP10.83□□□□□ -0.68
OTUD3-203ENST00000481686 REM2Q8IYK8 340 aaPredicted RBP10.75□□□□□ -0.69
OTUD3-203ENST00000481686 SPDYE1Q8NFV5 336 aaPredicted RBP10.74□□□□□ -0.69
OTUD3-203ENST00000481686 MIER1Q8N108 512 aa10.72□□□□□ -0.69
OTUD3-203ENST00000481686 PLCD3Q8N3E9 789 aa10.72□□□□□ -0.69
OTUD3-203ENST00000481686 KLHL34Q8N239 644 aa10.68□□□□□ -0.7
OTUD3-203ENST00000481686 CLEC11AQ9Y240 323 aa10.67□□□□□ -0.7
OTUD3-203ENST00000481686 SPOCK2Q92563 424 aa10.64□□□□□ -0.71
OTUD3-203ENST00000481686 PITPNM1O00562 1244 aa10.62□□□□□ -0.71
OTUD3-203ENST00000481686 PLEKHG5O94827 1062 aa10.62□□□□□ -0.71
OTUD3-203ENST00000481686 PRR29P0C7W0 189 aa10.62□□□□□ -0.71
OTUD3-203ENST00000481686 ZBTB47Q9UFB7 747 aaPredicted RBP10.58□□□□□ -0.72
OTUD3-203ENST00000481686 PKD2Q13563 968 aa10.56□□□□□ -0.72
OTUD3-203ENST00000481686 CREBZFQ9NS37 354 aa10.55□□□□□ -0.72
OTUD3-203ENST00000481686 MNX1P50219 401 aaPredicted RBP10.49□□□□□ -0.73
OTUD3-203ENST00000481686 NUBP1P53384 320 aa10.45□□□□□ -0.74
OTUD3-203ENST00000481686 CIZ1Q9ULV3 898 aaPredicted RBP10.42□□□□□ -0.74
OTUD3-203ENST00000481686 ECM2O94769 699 aaPredicted RBP10.41□□□□□ -0.74
OTUD3-203ENST00000481686 CHADLQ6NUI6 762 aa10.4□□□□□ -0.74
OTUD3-203ENST00000481686 FXR2P51116 673 aaKnown RBP eCLIP10.39□□□□□ -0.75
OTUD3-203ENST00000481686 CHRDL2Q6WN34 429 aa10.38□□□□□ -0.75
OTUD3-203ENST00000481686 NPM1P06748 294 aaKnown RBP eCLIP10.36□□□□□ -0.75
OTUD3-203ENST00000481686 GSE1Q14687 1217 aa10.36□□□□□ -0.75
OTUD3-203ENST00000481686 PRKAR2AP13861 404 aaKnown RBP10.35□□□□□ -0.75
OTUD3-203ENST00000481686 DCAF8Q5TAQ9 597 aa10.34□□□□□ -0.75
OTUD3-203ENST00000481686 RASEFQ8IZ41 740 aa10.34□□□□□ -0.75
OTUD3-203ENST00000481686 FARP1Q9Y4F1 1045 aaPredicted RBP10.34□□□□□ -0.75
OTUD3-203ENST00000481686 RGL2O15211 777 aa10.33□□□□□ -0.76
OTUD3-203ENST00000481686 DCAF8L2P0C7V8 631 aa10.33□□□□□ -0.76
OTUD3-203ENST00000481686 TRIM41Q8WV44 630 aa10.33□□□□□ -0.76
OTUD3-203ENST00000481686 FAM212AQ96EL1 285 aa10.32□□□□□ -0.76
OTUD3-203ENST00000481686 PIP4P2Q8N4L2 257 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms