RNA–Protein interactions for RNA: ENST00000481013.1

EXOSC8-206, Transcript of exosome component 8, humanhuman

TSL 3

Gene EXOSC8, Length 524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-206ENST00000481013 AEBP2Q6ZN18 517 aaPredicted RBP37.99■■■■□ 3.67
EXOSC8-206ENST00000481013 CHIC1Q5VXU3 224 aa36.24■■■■□ 3.39
EXOSC8-206ENST00000481013 SENP3Q9H4L4 574 aaPredicted RBP32.28■■■□□ 2.76
EXOSC8-206ENST00000481013 PHF23Q9BUL5 403 aaPredicted RBP31.96■■■□□ 2.71
EXOSC8-206ENST00000481013 FOXD1Q16676 465 aa30.12■■■□□ 2.41
EXOSC8-206ENST00000481013 PLPPR3Q6T4P5 718 aa29.03■■■□□ 2.24
EXOSC8-206ENST00000481013 PPP6R1Q9UPN7 881 aa28.39■■■□□ 2.14
EXOSC8-206ENST00000481013 ADRA2BP18089 450 aa28.3■■■□□ 2.12
EXOSC8-206ENST00000481013 PIAS4Q8N2W9 510 aaPredicted RBP28.17■■■□□ 2.1
EXOSC8-206ENST00000481013 MSH5O43196 834 aa28.03■■■□□ 2.08
EXOSC8-206ENST00000481013 POTEDQ86YR6 584 aa27.04■■□□□ 1.92
EXOSC8-206ENST00000481013 MAPK8IP2Q13387 824 aaPredicted RBP25.94■■□□□ 1.74
EXOSC8-206ENST00000481013 SCAF1Q9H7N4 1312 aaKnown RBP25.79■■□□□ 1.72
EXOSC8-206ENST00000481013 DMRT2Q9Y5R5 561 aa25.66■■□□□ 1.7
EXOSC8-206ENST00000481013 PPP4R3CPQ6ZMV5 832 aa25.52■■□□□ 1.68
EXOSC8-206ENST00000481013 CNKSR2Q8WXI2 1034 aa24.95■■□□□ 1.58
EXOSC8-206ENST00000481013 HOXD11P31277 338 aaPredicted RBP24.8■■□□□ 1.56
EXOSC8-206ENST00000481013 RNF216Q9NWF9 866 aaPredicted RBP24.67■■□□□ 1.54
EXOSC8-206ENST00000481013 DCAF8L1A6NGE4 600 aa24.62■■□□□ 1.53
EXOSC8-206ENST00000481013 NCBP3Q53F19 620 aaKnown RBP24.55■■□□□ 1.52
EXOSC8-206ENST00000481013 NPM3O75607 178 aaKnown RBP24.25■■□□□ 1.47
EXOSC8-206ENST00000481013 KCNA4P22459 653 aa24.02■■□□□ 1.44
EXOSC8-206ENST00000481013 RNF39Q9H2S5 420 aa23.98■■□□□ 1.43
EXOSC8-206ENST00000481013 CACNB1Q02641 598 aaPredicted RBP23.96■■□□□ 1.43
EXOSC8-206ENST00000481013 DNAJC5BQ9UF47 199 aa23.84■■□□□ 1.41
EXOSC8-206ENST00000481013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.64■■□□□ 1.379e-8■■□□□ 14
EXOSC8-206ENST00000481013 C1QBPQ07021 282 aaKnown RBP23.61■■□□□ 1.37
EXOSC8-206ENST00000481013 U3KPZ7 1027 aaPredicted RBP23.19■■□□□ 1.3
EXOSC8-206ENST00000481013 SLC4A2P04920 1241 aa23.13■■□□□ 1.29
EXOSC8-206ENST00000481013 SPINK5Q9NQ38 1064 aaPredicted RBP22.81■■□□□ 1.24
EXOSC8-206ENST00000481013 CAPN15O75808 1086 aa22.72■■□□□ 1.23
EXOSC8-206ENST00000481013 SLC4A1APQ9BWU0 796 aaKnown RBP22.69■■□□□ 1.22
EXOSC8-206ENST00000481013 DSG3P32926 999 aa22.54■■□□□ 1.2
EXOSC8-206ENST00000481013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.52■■□□□ 1.2
EXOSC8-206ENST00000481013 HNRNPUL2Q1KMD3 747 aaKnown RBP22.52■■□□□ 1.2
EXOSC8-206ENST00000481013 APLP2Q06481 763 aa22.46■■□□□ 1.19
EXOSC8-206ENST00000481013 TRHP20396 242 aaPredicted RBP22.43■■□□□ 1.18
EXOSC8-206ENST00000481013 SAMD1Q6SPF0 538 aaPredicted RBP22.43■■□□□ 1.18
EXOSC8-206ENST00000481013 MYCNP04198 464 aaPredicted RBP22.38■■□□□ 1.17
EXOSC8-206ENST00000481013 ZNF219Q9P2Y4 722 aaPredicted RBP22.33■■□□□ 1.17
EXOSC8-206ENST00000481013 FOXD4L1Q9NU39 408 aa22.29■■□□□ 1.16
EXOSC8-206ENST00000481013 ABCB7O75027 752 aa22.25■■□□□ 1.15
EXOSC8-206ENST00000481013 ZBTB22O15209 634 aa22.11■■□□□ 1.13
EXOSC8-206ENST00000481013 ATF5Q9Y2D1 282 aaPredicted RBP21.94■■□□□ 1.1
EXOSC8-206ENST00000481013 POLA2Q14181 598 aa21.89■■□□□ 1.09
EXOSC8-206ENST00000481013 ATXN8OSP0DMR3 200 aa21.55■■□□□ 1.04
EXOSC8-206ENST00000481013 RBM42Q9BTD8 480 aaKnown RBP21.43■■□□□ 1.02
EXOSC8-206ENST00000481013 ZBTB12Q9Y330 459 aaPredicted RBP21.36■■□□□ 1.01
EXOSC8-206ENST00000481013 CSRNP3Q8WYN3 585 aa21.28■■□□□ 1
EXOSC8-206ENST00000481013 POTEHQ6S545 545 aa21.21■□□□□ 0.99
EXOSC8-206ENST00000481013 OSCARQ8IYS5 282 aa21.17■□□□□ 0.98
EXOSC8-206ENST00000481013 EHMT2Q96KQ7 1210 aa21.12■□□□□ 0.97
EXOSC8-206ENST00000481013 AKT1S1Q96B36 256 aa21.02■□□□□ 0.96
EXOSC8-206ENST00000481013 FBLN2P98095 1184 aa20.98■□□□□ 0.95
EXOSC8-206ENST00000481013 CHRDL2Q6WN34 429 aa20.93■□□□□ 0.94
EXOSC8-206ENST00000481013 MKRN4PQ13434 485 aaPredicted RBP20.92■□□□□ 0.94
EXOSC8-206ENST00000481013 REM2Q8IYK8 340 aaPredicted RBP20.86■□□□□ 0.93
EXOSC8-206ENST00000481013 SPDYE2BA6NHP3 402 aa20.76■□□□□ 0.91
EXOSC8-206ENST00000481013 SPDYE6P0CI01 402 aa20.76■□□□□ 0.91
EXOSC8-206ENST00000481013 SPDYE2Q495Y8 402 aa20.76■□□□□ 0.91
EXOSC8-206ENST00000481013 PITPNM1O00562 1244 aa20.64■□□□□ 0.89
EXOSC8-206ENST00000481013 ZNF692Q9BU19 519 aaPredicted RBP20.59■□□□□ 0.89
EXOSC8-206ENST00000481013 SSUH2Q9Y2M2 353 aa20.53■□□□□ 0.88
EXOSC8-206ENST00000481013 PIP4P2Q8N4L2 257 aa20.5■□□□□ 0.87
EXOSC8-206ENST00000481013 FXR2P51116 673 aaKnown RBP eCLIP20.4■□□□□ 0.86
EXOSC8-206ENST00000481013 SPDYE1Q8NFV5 336 aaPredicted RBP20.35■□□□□ 0.85
EXOSC8-206ENST00000481013 CLEC11AQ9Y240 323 aa20.34■□□□□ 0.85
EXOSC8-206ENST00000481013 PABPN1Q86U42 306 aaKnown RBP eCLIP20.3■□□□□ 0.84
EXOSC8-206ENST00000481013 PRKAR2AP13861 404 aaKnown RBP20.1■□□□□ 0.81
EXOSC8-206ENST00000481013 HAX1O00165 279 aa20.07■□□□□ 0.8
EXOSC8-206ENST00000481013 SPDYE4A6NLX3 237 aa20.02■□□□□ 0.8
EXOSC8-206ENST00000481013 PRR29P0C7W0 189 aa20.02■□□□□ 0.8
EXOSC8-206ENST00000481013 SP7Q8TDD2 431 aaPredicted RBP19.99■□□□□ 0.79
EXOSC8-206ENST00000481013 CHADLQ6NUI6 762 aa19.96■□□□□ 0.79
EXOSC8-206ENST00000481013 EVX2Q03828 476 aa19.9■□□□□ 0.78
EXOSC8-206ENST00000481013 C19orf67A6NJJ6 358 aa19.74■□□□□ 0.75
EXOSC8-206ENST00000481013 STAG3Q9UJ98 1225 aa19.73■□□□□ 0.75
EXOSC8-206ENST00000481013 FARP1Q9Y4F1 1045 aaPredicted RBP19.66■□□□□ 0.74
EXOSC8-206ENST00000481013 CREBZFQ9NS37 354 aa19.6■□□□□ 0.73
EXOSC8-206ENST00000481013 PROM2Q8N271 834 aa19.56■□□□□ 0.72
EXOSC8-206ENST00000481013 CD44P16070 742 aaKnown RBP19.47■□□□□ 0.71
EXOSC8-206ENST00000481013 GABBR2O75899 941 aa19.41■□□□□ 0.7
EXOSC8-206ENST00000481013 MNX1P50219 401 aaPredicted RBP19.3■□□□□ 0.68
EXOSC8-206ENST00000481013 FKBP8Q14318 412 aa19.27■□□□□ 0.68
EXOSC8-206ENST00000481013 ZRANB1Q9UGI0 708 aa19.25■□□□□ 0.67
EXOSC8-206ENST00000481013 NPM1P06748 294 aaKnown RBP eCLIP19.19■□□□□ 0.66
EXOSC8-206ENST00000481013 ZNF579Q8NAF0 562 aaKnown RBP19.16■□□□□ 0.66
EXOSC8-206ENST00000481013 MIER1Q8N108 512 aa19.09■□□□□ 0.65
EXOSC8-206ENST00000481013 PAK3O75914 559 aaPredicted RBP19.08■□□□□ 0.64
EXOSC8-206ENST00000481013 CLCN6P51797 869 aa19.08■□□□□ 0.64
EXOSC8-206ENST00000481013 POTEIP0CG38 1075 aa19.03■□□□□ 0.64
EXOSC8-206ENST00000481013 PHF12Q96QT6 1004 aa19.02■□□□□ 0.64
EXOSC8-206ENST00000481013 PLEKHG5O94827 1062 aa18.97■□□□□ 0.63
EXOSC8-206ENST00000481013 GALR2O43603 387 aaPredicted RBP18.96■□□□□ 0.63
EXOSC8-206ENST00000481013 PLCD3Q8N3E9 789 aa18.94■□□□□ 0.62
EXOSC8-206ENST00000481013 TSPYL2Q9H2G4 693 aaPredicted RBP18.92■□□□□ 0.62
EXOSC8-206ENST00000481013 DCBLD2Q96PD2 775 aa18.9■□□□□ 0.62
EXOSC8-206ENST00000481013 RASEFQ8IZ41 740 aa18.81■□□□□ 0.6
EXOSC8-206ENST00000481013 CCDC61Q9Y6R9 512 aa18.8■□□□□ 0.6
EXOSC8-206ENST00000481013 LHX8Q68G74 356 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms