RNA–Protein interactions for RNA: ENST00000480960.1

CFHR1-205, Transcript of complement factor H related 1, humanhuman

TSL 2

Gene CFHR1, Length 723 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-205ENST00000480960 AEBP2Q6ZN18 517 aaPredicted RBP28.33■■■□□ 2.13
CFHR1-205ENST00000480960 CHIC1Q5VXU3 224 aa26.64■■□□□ 1.86
CFHR1-205ENST00000480960 SENP3Q9H4L4 574 aaPredicted RBP24.15■■□□□ 1.46
CFHR1-205ENST00000480960 PHF23Q9BUL5 403 aaPredicted RBP23.83■■□□□ 1.41
CFHR1-205ENST00000480960 FOXD1Q16676 465 aa22.58■■□□□ 1.21
CFHR1-205ENST00000480960 MSH5O43196 834 aa21.18■□□□□ 0.98
CFHR1-205ENST00000480960 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
CFHR1-205ENST00000480960 POTEDQ86YR6 584 aa21.13■□□□□ 0.97
CFHR1-205ENST00000480960 PIAS4Q8N2W9 510 aaPredicted RBP20.99■□□□□ 0.95
CFHR1-205ENST00000480960 PPP6R1Q9UPN7 881 aa20.94■□□□□ 0.94
CFHR1-205ENST00000480960 ADRA2BP18089 450 aa20.83■□□□□ 0.93
CFHR1-205ENST00000480960 MAPK8IP2Q13387 824 aaPredicted RBP19.22■□□□□ 0.67
CFHR1-205ENST00000480960 DMRT2Q9Y5R5 561 aa19.14■□□□□ 0.65
CFHR1-205ENST00000480960 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
CFHR1-205ENST00000480960 PPP4R3CPQ6ZMV5 832 aa18.51■□□□□ 0.55
CFHR1-205ENST00000480960 HOXD11P31277 338 aaPredicted RBP18.35■□□□□ 0.53
CFHR1-205ENST00000480960 CACNB1Q02641 598 aaPredicted RBP18.32■□□□□ 0.52
CFHR1-205ENST00000480960 DCAF8L1A6NGE4 600 aa18.29■□□□□ 0.52
CFHR1-205ENST00000480960 CNKSR2Q8WXI2 1034 aa18.22■□□□□ 0.51
CFHR1-205ENST00000480960 RNF216Q9NWF9 866 aaPredicted RBP18.13■□□□□ 0.49
CFHR1-205ENST00000480960 RNF39Q9H2S5 420 aa18.09■□□□□ 0.49
CFHR1-205ENST00000480960 C1QBPQ07021 282 aaKnown RBP17.8■□□□□ 0.44
CFHR1-205ENST00000480960 DNAJC5BQ9UF47 199 aa17.79■□□□□ 0.44
CFHR1-205ENST00000480960 NCBP3Q53F19 620 aaKnown RBP17.7■□□□□ 0.42
CFHR1-205ENST00000480960 NPM3O75607 178 aaKnown RBP17.47■□□□□ 0.39
CFHR1-205ENST00000480960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.38
CFHR1-205ENST00000480960 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
CFHR1-205ENST00000480960 KCNA4P22459 653 aa16.91■□□□□ 0.3
CFHR1-205ENST00000480960 SPINK5Q9NQ38 1064 aaPredicted RBP16.9■□□□□ 0.3
CFHR1-205ENST00000480960 DSG3P32926 999 aa16.85■□□□□ 0.29
CFHR1-205ENST00000480960 CAPN15O75808 1086 aa16.84■□□□□ 0.29
CFHR1-205ENST00000480960 SLC4A2P04920 1241 aa16.78■□□□□ 0.28
CFHR1-205ENST00000480960 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
CFHR1-205ENST00000480960 APLP2Q06481 763 aa16.51■□□□□ 0.23
CFHR1-205ENST00000480960 POTEHQ6S545 545 aa16.5■□□□□ 0.23
CFHR1-205ENST00000480960 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
CFHR1-205ENST00000480960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
CFHR1-205ENST00000480960 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
CFHR1-205ENST00000480960 ABCB7O75027 752 aa16.43■□□□□ 0.22
CFHR1-205ENST00000480960 SAMD1Q6SPF0 538 aaPredicted RBP16.36■□□□□ 0.21
CFHR1-205ENST00000480960 MYCNP04198 464 aaPredicted RBP16.14■□□□□ 0.17
CFHR1-205ENST00000480960 POLA2Q14181 598 aa16.04■□□□□ 0.16
CFHR1-205ENST00000480960 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
CFHR1-205ENST00000480960 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
CFHR1-205ENST00000480960 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
CFHR1-205ENST00000480960 ATF5Q9Y2D1 282 aaPredicted RBP15.83■□□□□ 0.12
CFHR1-205ENST00000480960 CHRDL2Q6WN34 429 aa15.81■□□□□ 0.12
CFHR1-205ENST00000480960 ZBTB12Q9Y330 459 aaPredicted RBP15.67■□□□□ 0.1
CFHR1-205ENST00000480960 AKT1S1Q96B36 256 aa15.65■□□□□ 0.1
CFHR1-205ENST00000480960 ZBTB22O15209 634 aa15.56■□□□□ 0.08
CFHR1-205ENST00000480960 REM2Q8IYK8 340 aaPredicted RBP15.51■□□□□ 0.07
CFHR1-205ENST00000480960 OSCARQ8IYS5 282 aa15.51■□□□□ 0.07
CFHR1-205ENST00000480960 ATXN8OSP0DMR3 200 aa15.41■□□□□ 0.06
CFHR1-205ENST00000480960 PIP4P2Q8N4L2 257 aa15.4■□□□□ 0.06
CFHR1-205ENST00000480960 SP7Q8TDD2 431 aaPredicted RBP15.35■□□□□ 0.05
CFHR1-205ENST00000480960 PITPNM1O00562 1244 aa15.34■□□□□ 0.05
CFHR1-205ENST00000480960 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.04
CFHR1-205ENST00000480960 SPDYE2BA6NHP3 402 aa15.19■□□□□ 0.02
CFHR1-205ENST00000480960 SPDYE6P0CI01 402 aa15.19■□□□□ 0.02
CFHR1-205ENST00000480960 SPDYE2Q495Y8 402 aa15.19■□□□□ 0.02
CFHR1-205ENST00000480960 HAX1O00165 279 aa15.16■□□□□ 0.02
CFHR1-205ENST00000480960 FBLN2P98095 1184 aa15.16■□□□□ 0.02
CFHR1-205ENST00000480960 MKRN4PQ13434 485 aaPredicted RBP15.09■□□□□ 0.01
CFHR1-205ENST00000480960 EVX2Q03828 476 aa15.01□□□□□ -0.01
CFHR1-205ENST00000480960 EHMT2Q96KQ7 1210 aa15□□□□□ -0.01
CFHR1-205ENST00000480960 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
CFHR1-205ENST00000480960 SPDYE1Q8NFV5 336 aaPredicted RBP14.97□□□□□ -0.01
CFHR1-205ENST00000480960 ZNF692Q9BU19 519 aaPredicted RBP14.95□□□□□ -0.02
CFHR1-205ENST00000480960 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
CFHR1-205ENST00000480960 PRKAR2AP13861 404 aaKnown RBP14.92□□□□□ -0.02
CFHR1-205ENST00000480960 C19orf67A6NJJ6 358 aa14.8□□□□□ -0.04
CFHR1-205ENST00000480960 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
CFHR1-205ENST00000480960 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
CFHR1-205ENST00000480960 CHADLQ6NUI6 762 aa14.71□□□□□ -0.05
CFHR1-205ENST00000480960 PRR29P0C7W0 189 aa14.67□□□□□ -0.06
CFHR1-205ENST00000480960 GABBR2O75899 941 aa14.63□□□□□ -0.07
CFHR1-205ENST00000480960 FARP1Q9Y4F1 1045 aaPredicted RBP14.47□□□□□ -0.09
CFHR1-205ENST00000480960 CD44P16070 742 aaKnown RBP14.43□□□□□ -0.1
CFHR1-205ENST00000480960 LHX8Q68G74 356 aa14.39□□□□□ -0.11
CFHR1-205ENST00000480960 POTEIP0CG38 1075 aa14.35□□□□□ -0.11
CFHR1-205ENST00000480960 CLCN6P51797 869 aa14.31□□□□□ -0.12
CFHR1-205ENST00000480960 CREBZFQ9NS37 354 aa14.28□□□□□ -0.12
CFHR1-205ENST00000480960 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
CFHR1-205ENST00000480960 ZNF579Q8NAF0 562 aaKnown RBP14.22□□□□□ -0.13
CFHR1-205ENST00000480960 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.13
CFHR1-205ENST00000480960 ZRANB1Q9UGI0 708 aa14.19□□□□□ -0.14
CFHR1-205ENST00000480960 DCBLD2Q96PD2 775 aa14.14□□□□□ -0.15
CFHR1-205ENST00000480960 GALR2O43603 387 aaPredicted RBP14.06□□□□□ -0.16
CFHR1-205ENST00000480960 MNX1P50219 401 aaPredicted RBP14.04□□□□□ -0.16
CFHR1-205ENST00000480960 PAK3O75914 559 aaPredicted RBP13.98□□□□□ -0.17
CFHR1-205ENST00000480960 PHF12Q96QT6 1004 aa13.98□□□□□ -0.17
CFHR1-205ENST00000480960 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
CFHR1-205ENST00000480960 PROM2Q8N271 834 aa13.88□□□□□ -0.19
CFHR1-205ENST00000480960 POTEB2H3BUK9 544 aa13.87□□□□□ -0.19
CFHR1-205ENST00000480960 OTUD5Q96G74 571 aa13.86□□□□□ -0.19
CFHR1-205ENST00000480960 PELP1Q8IZL8 1130 aaKnown RBP13.84□□□□□ -0.19
CFHR1-205ENST00000480960 MS4A3Q96HJ5 214 aa13.78□□□□□ -0.2
CFHR1-205ENST00000480960 ASTLQ6HA08 431 aaPredicted RBP13.77□□□□□ -0.21
CFHR1-205ENST00000480960 ATMINO43313 823 aaPredicted RBP13.72□□□□□ -0.21
CFHR1-205ENST00000480960 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms