RNA–Protein interactions for RNA: ENST00000480838.1

FAP-211, Transcript of fibroblast activation protein alpha, humanhuman

TSL 1 (best)

Gene FAP, Length 1,366 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAP-211ENST00000480838 AEBP2Q6ZN18 517 aaPredicted RBP27.9■■■□□ 2.06
FAP-211ENST00000480838 CHIC1Q5VXU3 224 aa26.89■■□□□ 1.9
FAP-211ENST00000480838 SENP3Q9H4L4 574 aaPredicted RBP23.95■■□□□ 1.42
FAP-211ENST00000480838 PHF23Q9BUL5 403 aaPredicted RBP23.58■■□□□ 1.37
FAP-211ENST00000480838 FOXD1Q16676 465 aa22.14■■□□□ 1.14
FAP-211ENST00000480838 PLPPR3Q6T4P5 718 aa21.68■■□□□ 1.06
FAP-211ENST00000480838 POTEDQ86YR6 584 aa21.64■■□□□ 1.06
FAP-211ENST00000480838 PPP6R1Q9UPN7 881 aa20.85■□□□□ 0.93
FAP-211ENST00000480838 ADRA2BP18089 450 aa20.84■□□□□ 0.93
FAP-211ENST00000480838 PIAS4Q8N2W9 510 aaPredicted RBP20.83■□□□□ 0.92
FAP-211ENST00000480838 MSH5O43196 834 aa20.78■□□□□ 0.92
FAP-211ENST00000480838 SCAF1Q9H7N4 1312 aaKnown RBP19.28■□□□□ 0.68
FAP-211ENST00000480838 MAPK8IP2Q13387 824 aaPredicted RBP19.01■□□□□ 0.63
FAP-211ENST00000480838 DMRT2Q9Y5R5 561 aa18.99■□□□□ 0.63
FAP-211ENST00000480838 PPP4R3CPQ6ZMV5 832 aa18.96■□□□□ 0.63
FAP-211ENST00000480838 CNKSR2Q8WXI2 1034 aa18.61■□□□□ 0.57
FAP-211ENST00000480838 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
FAP-211ENST00000480838 HOXD11P31277 338 aaPredicted RBP18.41■□□□□ 0.54
FAP-211ENST00000480838 RNF216Q9NWF9 866 aaPredicted RBP18.37■□□□□ 0.53
FAP-211ENST00000480838 DCAF8L1A6NGE4 600 aa18.16■□□□□ 0.5
FAP-211ENST00000480838 CACNB1Q02641 598 aaPredicted RBP18.1■□□□□ 0.49
FAP-211ENST00000480838 NPM3O75607 178 aaKnown RBP18.04■□□□□ 0.48
FAP-211ENST00000480838 KCNA4P22459 653 aa17.91■□□□□ 0.46
FAP-211ENST00000480838 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
FAP-211ENST00000480838 RNF39Q9H2S5 420 aa17.67■□□□□ 0.42
FAP-211ENST00000480838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.55■□□□□ 0.4
FAP-211ENST00000480838 C1QBPQ07021 282 aaKnown RBP17.52■□□□□ 0.39
FAP-211ENST00000480838 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
FAP-211ENST00000480838 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
FAP-211ENST00000480838 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
FAP-211ENST00000480838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.96■□□□□ 0.31
FAP-211ENST00000480838 HNRNPUL2Q1KMD3 747 aaKnown RBP16.96■□□□□ 0.31
FAP-211ENST00000480838 APLP2Q06481 763 aa16.94■□□□□ 0.3
FAP-211ENST00000480838 SAMD1Q6SPF0 538 aaPredicted RBP16.83■□□□□ 0.28
FAP-211ENST00000480838 CAPN15O75808 1086 aa16.8■□□□□ 0.28
FAP-211ENST00000480838 MYCNP04198 464 aaPredicted RBP16.77■□□□□ 0.28
FAP-211ENST00000480838 SPINK5Q9NQ38 1064 aaPredicted RBP16.77■□□□□ 0.27
FAP-211ENST00000480838 POTEHQ6S545 545 aa16.74■□□□□ 0.27
FAP-211ENST00000480838 FOXD4L1Q9NU39 408 aa16.74■□□□□ 0.27
FAP-211ENST00000480838 ZNF219Q9P2Y4 722 aaPredicted RBP16.69■□□□□ 0.26
FAP-211ENST00000480838 DSG3P32926 999 aa16.63■□□□□ 0.25
FAP-211ENST00000480838 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
FAP-211ENST00000480838 ZBTB22O15209 634 aa16.42■□□□□ 0.22
FAP-211ENST00000480838 ABCB7O75027 752 aa16.37■□□□□ 0.21
FAP-211ENST00000480838 ATXN8OSP0DMR3 200 aa16.26■□□□□ 0.19
FAP-211ENST00000480838 POLA2Q14181 598 aa16.2■□□□□ 0.18
FAP-211ENST00000480838 ATF5Q9Y2D1 282 aaPredicted RBP16.17■□□□□ 0.18
FAP-211ENST00000480838 ZBTB12Q9Y330 459 aaPredicted RBP16.08■□□□□ 0.16
FAP-211ENST00000480838 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
FAP-211ENST00000480838 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
FAP-211ENST00000480838 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
FAP-211ENST00000480838 FBLN2P98095 1184 aa15.75■□□□□ 0.11
FAP-211ENST00000480838 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
FAP-211ENST00000480838 AKT1S1Q96B36 256 aa15.64■□□□□ 0.09
FAP-211ENST00000480838 SPDYE2BA6NHP3 402 aa15.53■□□□□ 0.08
FAP-211ENST00000480838 SPDYE6P0CI01 402 aa15.53■□□□□ 0.08
FAP-211ENST00000480838 SPDYE2Q495Y8 402 aa15.53■□□□□ 0.08
FAP-211ENST00000480838 MKRN4PQ13434 485 aaPredicted RBP15.49■□□□□ 0.07
FAP-211ENST00000480838 CHRDL2Q6WN34 429 aa15.43■□□□□ 0.06
FAP-211ENST00000480838 REM2Q8IYK8 340 aaPredicted RBP15.42■□□□□ 0.06
FAP-211ENST00000480838 ZNF692Q9BU19 519 aaPredicted RBP15.34■□□□□ 0.05
FAP-211ENST00000480838 SSUH2Q9Y2M2 353 aa15.31■□□□□ 0.04
FAP-211ENST00000480838 PITPNM1O00562 1244 aa15.24■□□□□ 0.03
FAP-211ENST00000480838 SP7Q8TDD2 431 aaPredicted RBP15.22■□□□□ 0.03
FAP-211ENST00000480838 SPDYE1Q8NFV5 336 aaPredicted RBP15.2■□□□□ 0.02
FAP-211ENST00000480838 PABPN1Q86U42 306 aaKnown RBP eCLIP15.1■□□□□ 0.01
FAP-211ENST00000480838 PIP4P2Q8N4L2 257 aa15.09■□□□□ 0.01
FAP-211ENST00000480838 FXR2P51116 673 aaKnown RBP eCLIP15.08■□□□□ 0
FAP-211ENST00000480838 CLEC11AQ9Y240 323 aa15.06■□□□□ 0
FAP-211ENST00000480838 SPDYE4A6NLX3 237 aa14.99□□□□□ -0.01
FAP-211ENST00000480838 PRR29P0C7W0 189 aa14.9□□□□□ -0.02
FAP-211ENST00000480838 STAG3Q9UJ98 1225 aa14.87□□□□□ -0.03
FAP-211ENST00000480838 PRKAR2AP13861 404 aaKnown RBP14.86□□□□□ -0.03
FAP-211ENST00000480838 HAX1O00165 279 aa14.76□□□□□ -0.05
FAP-211ENST00000480838 PROM2Q8N271 834 aa14.69□□□□□ -0.06
FAP-211ENST00000480838 CHADLQ6NUI6 762 aa14.68□□□□□ -0.06
FAP-211ENST00000480838 C19orf67A6NJJ6 358 aa14.58□□□□□ -0.08
FAP-211ENST00000480838 FARP1Q9Y4F1 1045 aaPredicted RBP14.58□□□□□ -0.08
FAP-211ENST00000480838 CREBZFQ9NS37 354 aa14.54□□□□□ -0.08
FAP-211ENST00000480838 PLSCR2Q9NRY7 297 aa14.51□□□□□ -0.09
FAP-211ENST00000480838 FKBP8Q14318 412 aa14.5□□□□□ -0.09
FAP-211ENST00000480838 EVX2Q03828 476 aa14.46□□□□□ -0.1
FAP-211ENST00000480838 CD44P16070 742 aaKnown RBP14.43□□□□□ -0.1
FAP-211ENST00000480838 NPM1P06748 294 aaKnown RBP eCLIP14.41□□□□□ -0.1
FAP-211ENST00000480838 PLEKHG5O94827 1062 aa14.39□□□□□ -0.11
FAP-211ENST00000480838 CLCN6P51797 869 aa14.35□□□□□ -0.11
FAP-211ENST00000480838 PAK3O75914 559 aaPredicted RBP14.32□□□□□ -0.12
FAP-211ENST00000480838 MNX1P50219 401 aaPredicted RBP14.31□□□□□ -0.12
FAP-211ENST00000480838 MIER1Q8N108 512 aa14.27□□□□□ -0.12
FAP-211ENST00000480838 FBXO3Q9UK99 471 aa14.27□□□□□ -0.12
FAP-211ENST00000480838 GABBR2O75899 941 aa14.26□□□□□ -0.13
FAP-211ENST00000480838 LHX8Q68G74 356 aa14.25□□□□□ -0.13
FAP-211ENST00000480838 ZNF579Q8NAF0 562 aaKnown RBP14.25□□□□□ -0.13
FAP-211ENST00000480838 ZRANB1Q9UGI0 708 aa14.25□□□□□ -0.13
FAP-211ENST00000480838 PLCD3Q8N3E9 789 aa14.22□□□□□ -0.13
FAP-211ENST00000480838 ZBTB47Q9UFB7 747 aaPredicted RBP14.22□□□□□ -0.13
FAP-211ENST00000480838 TSPYL2Q9H2G4 693 aaPredicted RBP14.03□□□□□ -0.16
FAP-211ENST00000480838 PHF12Q96QT6 1004 aa14.02□□□□□ -0.17
FAP-211ENST00000480838 DCBLD2Q96PD2 775 aa14.01□□□□□ -0.17
FAP-211ENST00000480838 VASPP50552 380 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms