RNA–Protein interactions for RNA: ENST00000480788.1

LNPK-209, Transcript of lunapark, ER junction formation factor, humanhuman

TSL 3

Gene LNPK, Length 311 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNPK-209ENST00000480788 AEBP2Q6ZN18 517 aaPredicted RBP24.5■■□□□ 1.51
LNPK-209ENST00000480788 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
LNPK-209ENST00000480788 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
LNPK-209ENST00000480788 PHF23Q9BUL5 403 aaPredicted RBP20.63■□□□□ 0.89
LNPK-209ENST00000480788 FOXD1Q16676 465 aa19.56■□□□□ 0.72
LNPK-209ENST00000480788 POTEDQ86YR6 584 aa18.44■□□□□ 0.54
LNPK-209ENST00000480788 MSH5O43196 834 aa18.35■□□□□ 0.53
LNPK-209ENST00000480788 PIAS4Q8N2W9 510 aaPredicted RBP18.26■□□□□ 0.51
LNPK-209ENST00000480788 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
LNPK-209ENST00000480788 PPP6R1Q9UPN7 881 aa18.1■□□□□ 0.49
LNPK-209ENST00000480788 ADRA2BP18089 450 aa18.07■□□□□ 0.48
LNPK-209ENST00000480788 MAPK8IP2Q13387 824 aaPredicted RBP16.68■□□□□ 0.26
LNPK-209ENST00000480788 DMRT2Q9Y5R5 561 aa16.52■□□□□ 0.24
LNPK-209ENST00000480788 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
LNPK-209ENST00000480788 DCAF8L1A6NGE4 600 aa16.06■□□□□ 0.16
LNPK-209ENST00000480788 CACNB1Q02641 598 aaPredicted RBP16.02■□□□□ 0.16
LNPK-209ENST00000480788 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
LNPK-209ENST00000480788 HOXD11P31277 338 aaPredicted RBP15.77■□□□□ 0.12
LNPK-209ENST00000480788 CNKSR2Q8WXI2 1034 aa15.69■□□□□ 0.1
LNPK-209ENST00000480788 RNF39Q9H2S5 420 aa15.64■□□□□ 0.09
LNPK-209ENST00000480788 RNF216Q9NWF9 866 aaPredicted RBP15.6■□□□□ 0.09
LNPK-209ENST00000480788 C1QBPQ07021 282 aaKnown RBP15.37■□□□□ 0.05
LNPK-209ENST00000480788 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
LNPK-209ENST00000480788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.02
LNPK-209ENST00000480788 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
LNPK-209ENST00000480788 NPM3O75607 178 aaKnown RBP15.05■□□□□ -0
LNPK-209ENST00000480788 U3KPZ7 1027 aaPredicted RBP14.75□□□□□ -0.05
LNPK-209ENST00000480788 CAPN15O75808 1086 aa14.7□□□□□ -0.06
LNPK-209ENST00000480788 SPINK5Q9NQ38 1064 aaPredicted RBP14.68□□□□□ -0.06
LNPK-209ENST00000480788 DSG3P32926 999 aa14.58□□□□□ -0.08
LNPK-209ENST00000480788 KCNA4P22459 653 aa14.57□□□□□ -0.08
LNPK-209ENST00000480788 SLC4A2P04920 1241 aa14.43□□□□□ -0.1
LNPK-209ENST00000480788 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
LNPK-209ENST00000480788 POTEHQ6S545 545 aa14.41□□□□□ -0.1
LNPK-209ENST00000480788 ABCB7O75027 752 aa14.38□□□□□ -0.11
LNPK-209ENST00000480788 APLP2Q06481 763 aa14.26□□□□□ -0.13
LNPK-209ENST00000480788 ZNF219Q9P2Y4 722 aaPredicted RBP14.25□□□□□ -0.13
LNPK-209ENST00000480788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.18□□□□□ -0.14
LNPK-209ENST00000480788 HNRNPUL2Q1KMD3 747 aaKnown RBP14.18□□□□□ -0.14
LNPK-209ENST00000480788 SAMD1Q6SPF0 538 aaPredicted RBP14.1□□□□□ -0.15
LNPK-209ENST00000480788 MYCNP04198 464 aaPredicted RBP13.91□□□□□ -0.18
LNPK-209ENST00000480788 POLA2Q14181 598 aa13.91□□□□□ -0.18
LNPK-209ENST00000480788 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
LNPK-209ENST00000480788 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
LNPK-209ENST00000480788 SLC4A1APQ9BWU0 796 aaKnown RBP13.69□□□□□ -0.22
LNPK-209ENST00000480788 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
LNPK-209ENST00000480788 FOXD4L1Q9NU39 408 aa13.62□□□□□ -0.23
LNPK-209ENST00000480788 AKT1S1Q96B36 256 aa13.51□□□□□ -0.25
LNPK-209ENST00000480788 ZBTB12Q9Y330 459 aaPredicted RBP13.51□□□□□ -0.25
LNPK-209ENST00000480788 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
LNPK-209ENST00000480788 REM2Q8IYK8 340 aaPredicted RBP13.43□□□□□ -0.26
LNPK-209ENST00000480788 ZBTB22O15209 634 aa13.37□□□□□ -0.27
LNPK-209ENST00000480788 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
LNPK-209ENST00000480788 SP7Q8TDD2 431 aaPredicted RBP13.36□□□□□ -0.27
LNPK-209ENST00000480788 PITPNM1O00562 1244 aa13.32□□□□□ -0.28
LNPK-209ENST00000480788 HAX1O00165 279 aa13.26□□□□□ -0.29
LNPK-209ENST00000480788 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.3
LNPK-209ENST00000480788 ATXN8OSP0DMR3 200 aa13.14□□□□□ -0.31
LNPK-209ENST00000480788 FBLN2P98095 1184 aa13.14□□□□□ -0.31
LNPK-209ENST00000480788 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
LNPK-209ENST00000480788 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
LNPK-209ENST00000480788 SPDYE2Q495Y8 402 aa13.09□□□□□ -0.31
LNPK-209ENST00000480788 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
LNPK-209ENST00000480788 EVX2Q03828 476 aa13.05□□□□□ -0.32
LNPK-209ENST00000480788 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
LNPK-209ENST00000480788 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
LNPK-209ENST00000480788 SPDYE1Q8NFV5 336 aaPredicted RBP12.96□□□□□ -0.33
LNPK-209ENST00000480788 ZNF692Q9BU19 519 aaPredicted RBP12.96□□□□□ -0.33
LNPK-209ENST00000480788 SSUH2Q9Y2M2 353 aa12.86□□□□□ -0.35
LNPK-209ENST00000480788 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
LNPK-209ENST00000480788 C19orf67A6NJJ6 358 aa12.78□□□□□ -0.36
LNPK-209ENST00000480788 PABPN1Q86U42 306 aaKnown RBP eCLIP12.77□□□□□ -0.37
LNPK-209ENST00000480788 PRR29P0C7W0 189 aa12.74□□□□□ -0.37
LNPK-209ENST00000480788 GABBR2O75899 941 aa12.71□□□□□ -0.37
LNPK-209ENST00000480788 CD44P16070 742 aaKnown RBP12.56□□□□□ -0.4
LNPK-209ENST00000480788 LHX8Q68G74 356 aa12.55□□□□□ -0.4
LNPK-209ENST00000480788 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.41
LNPK-209ENST00000480788 CSRNP3Q8WYN3 585 aa12.49□□□□□ -0.41
LNPK-209ENST00000480788 POTEIP0CG38 1075 aa12.43□□□□□ -0.42
LNPK-209ENST00000480788 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
LNPK-209ENST00000480788 DCBLD2Q96PD2 775 aa12.35□□□□□ -0.43
LNPK-209ENST00000480788 CREBZFQ9NS37 354 aa12.33□□□□□ -0.44
LNPK-209ENST00000480788 EHMT2Q96KQ7 1210 aa12.32□□□□□ -0.44
LNPK-209ENST00000480788 ZNF579Q8NAF0 562 aaKnown RBP12.28□□□□□ -0.44
LNPK-209ENST00000480788 STAG3Q9UJ98 1225 aa12.27□□□□□ -0.45
LNPK-209ENST00000480788 SPDYE4A6NLX3 237 aa12.26□□□□□ -0.45
LNPK-209ENST00000480788 CLCN6P51797 869 aa12.26□□□□□ -0.45
LNPK-209ENST00000480788 GALR2O43603 387 aaPredicted RBP12.23□□□□□ -0.45
LNPK-209ENST00000480788 PHF12Q96QT6 1004 aa12.18□□□□□ -0.46
LNPK-209ENST00000480788 PAK3O75914 559 aaPredicted RBP12.17□□□□□ -0.46
LNPK-209ENST00000480788 PLSCR2Q9NRY7 297 aa12.1□□□□□ -0.47
LNPK-209ENST00000480788 NPM1P06748 294 aaKnown RBP eCLIP12.08□□□□□ -0.48
LNPK-209ENST00000480788 POTEB2H3BUK9 544 aa12.04□□□□□ -0.48
LNPK-209ENST00000480788 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
LNPK-209ENST00000480788 OTUD5Q96G74 571 aa12.03□□□□□ -0.48
LNPK-209ENST00000480788 PELP1Q8IZL8 1130 aaKnown RBP12□□□□□ -0.49
LNPK-209ENST00000480788 MS4A3Q96HJ5 214 aa11.98□□□□□ -0.49
LNPK-209ENST00000480788 TSPYL2Q9H2G4 693 aaPredicted RBP11.97□□□□□ -0.49
LNPK-209ENST00000480788 METRNQ9UJH8 293 aa11.91□□□□□ -0.5
LNPK-209ENST00000480788 ATMINO43313 823 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms