RNA–Protein interactions for RNA: ENST00000480776.1

MTMR3-208, Transcript of myotubularin related protein 3, humanhuman

TSL 2

Gene MTMR3, Length 547 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR3-208ENST00000480776 AEBP2Q6ZN18 517 aaPredicted RBP28.24■■■□□ 2.11
MTMR3-208ENST00000480776 CHIC1Q5VXU3 224 aa27.47■■□□□ 1.99
MTMR3-208ENST00000480776 PHF23Q9BUL5 403 aaPredicted RBP24.16■■□□□ 1.46
MTMR3-208ENST00000480776 SENP3Q9H4L4 574 aaPredicted RBP23.97■■□□□ 1.43
MTMR3-208ENST00000480776 FOXD1Q16676 465 aa22.27■■□□□ 1.16
MTMR3-208ENST00000480776 PLPPR3Q6T4P5 718 aa22.27■■□□□ 1.16
MTMR3-208ENST00000480776 PPP6R1Q9UPN7 881 aa21.36■■□□□ 1.01
MTMR3-208ENST00000480776 ADRA2BP18089 450 aa21.33■■□□□ 1.01
MTMR3-208ENST00000480776 PIAS4Q8N2W9 510 aaPredicted RBP20.97■□□□□ 0.95
MTMR3-208ENST00000480776 MSH5O43196 834 aa20.57■□□□□ 0.88
MTMR3-208ENST00000480776 PPP4R3CPQ6ZMV5 832 aa19.61■□□□□ 0.73
MTMR3-208ENST00000480776 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
MTMR3-208ENST00000480776 MAPK8IP2Q13387 824 aaPredicted RBP19.4■□□□□ 0.7
MTMR3-208ENST00000480776 DMRT2Q9Y5R5 561 aa19.12■□□□□ 0.65
MTMR3-208ENST00000480776 CNKSR2Q8WXI2 1034 aa19.09■□□□□ 0.65
MTMR3-208ENST00000480776 NCBP3Q53F19 620 aaKnown RBP19.06■□□□□ 0.64
MTMR3-208ENST00000480776 KCNA4P22459 653 aa19.02■□□□□ 0.64
MTMR3-208ENST00000480776 POTEDQ86YR6 584 aa18.93■□□□□ 0.62
MTMR3-208ENST00000480776 NPM3O75607 178 aaKnown RBP18.78■□□□□ 0.6
MTMR3-208ENST00000480776 RNF216Q9NWF9 866 aaPredicted RBP18.73■□□□□ 0.59
MTMR3-208ENST00000480776 HOXD11P31277 338 aaPredicted RBP18.69■□□□□ 0.58
MTMR3-208ENST00000480776 DCAF8L1A6NGE4 600 aa18.32■□□□□ 0.52
MTMR3-208ENST00000480776 DNAJC5BQ9UF47 199 aa18.23■□□□□ 0.51
MTMR3-208ENST00000480776 SLC4A1APQ9BWU0 796 aaKnown RBP18.1■□□□□ 0.49
MTMR3-208ENST00000480776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.81■□□□□ 0.449e-7■■□□□ 12.2
MTMR3-208ENST00000480776 SLC4A2P04920 1241 aa17.76■□□□□ 0.43
MTMR3-208ENST00000480776 RNF39Q9H2S5 420 aa17.62■□□□□ 0.41
MTMR3-208ENST00000480776 FOXD4L1Q9NU39 408 aa17.54■□□□□ 0.4
MTMR3-208ENST00000480776 U3KPZ7 1027 aaPredicted RBP17.51■□□□□ 0.39
MTMR3-208ENST00000480776 ZBTB22O15209 634 aa17.5■□□□□ 0.39
MTMR3-208ENST00000480776 EHMT2Q96KQ7 1210 aa17.46■□□□□ 0.39
MTMR3-208ENST00000480776 C1QBPQ07021 282 aaKnown RBP17.4■□□□□ 0.38
MTMR3-208ENST00000480776 MYCNP04198 464 aaPredicted RBP17.35■□□□□ 0.37
MTMR3-208ENST00000480776 CSRNP3Q8WYN3 585 aa17.33■□□□□ 0.36
MTMR3-208ENST00000480776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
MTMR3-208ENST00000480776 CACNB1Q02641 598 aaPredicted RBP17.25■□□□□ 0.35
MTMR3-208ENST00000480776 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
MTMR3-208ENST00000480776 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
MTMR3-208ENST00000480776 APLP2Q06481 763 aa17.09■□□□□ 0.33
MTMR3-208ENST00000480776 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
MTMR3-208ENST00000480776 CAPN15O75808 1086 aa17■□□□□ 0.31
MTMR3-208ENST00000480776 ATXN8OSP0DMR3 200 aa16.94■□□□□ 0.3
MTMR3-208ENST00000480776 ATF5Q9Y2D1 282 aaPredicted RBP16.91■□□□□ 0.3
MTMR3-208ENST00000480776 TRHP20396 242 aaPredicted RBP16.9■□□□□ 0.3
MTMR3-208ENST00000480776 ZNF219Q9P2Y4 722 aaPredicted RBP16.87■□□□□ 0.29
MTMR3-208ENST00000480776 DSG3P32926 999 aa16.74■□□□□ 0.27
MTMR3-208ENST00000480776 ABCB7O75027 752 aa16.66■□□□□ 0.26
MTMR3-208ENST00000480776 POLA2Q14181 598 aa16.6■□□□□ 0.25
MTMR3-208ENST00000480776 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
MTMR3-208ENST00000480776 FBLN2P98095 1184 aa16.2■□□□□ 0.18
MTMR3-208ENST00000480776 MKRN4PQ13434 485 aaPredicted RBP16.16■□□□□ 0.18
MTMR3-208ENST00000480776 OSCARQ8IYS5 282 aa16.02■□□□□ 0.16
MTMR3-208ENST00000480776 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
MTMR3-208ENST00000480776 SPDYE2BA6NHP3 402 aa15.86■□□□□ 0.13
MTMR3-208ENST00000480776 SPDYE6P0CI01 402 aa15.86■□□□□ 0.13
MTMR3-208ENST00000480776 SPDYE2Q495Y8 402 aa15.86■□□□□ 0.13
MTMR3-208ENST00000480776 ZNF692Q9BU19 519 aaPredicted RBP15.8■□□□□ 0.12
MTMR3-208ENST00000480776 SPDYE4A6NLX3 237 aa15.75■□□□□ 0.11
MTMR3-208ENST00000480776 AKT1S1Q96B36 256 aa15.73■□□□□ 0.11
MTMR3-208ENST00000480776 SSUH2Q9Y2M2 353 aa15.71■□□□□ 0.11
MTMR3-208ENST00000480776 FKBP8Q14318 412 aa15.67■□□□□ 0.1
MTMR3-208ENST00000480776 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.08
MTMR3-208ENST00000480776 REM2Q8IYK8 340 aaPredicted RBP15.58■□□□□ 0.08
MTMR3-208ENST00000480776 PROM2Q8N271 834 aa15.46■□□□□ 0.07
MTMR3-208ENST00000480776 SPDYE1Q8NFV5 336 aaPredicted RBP15.41■□□□□ 0.06
MTMR3-208ENST00000480776 PITPNM1O00562 1244 aa15.4■□□□□ 0.06
MTMR3-208ENST00000480776 NISCHQ9Y2I1 1504 aa15.38■□□□□ 0.05
MTMR3-208ENST00000480776 CLEC11AQ9Y240 323 aa15.37■□□□□ 0.05
MTMR3-208ENST00000480776 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
MTMR3-208ENST00000480776 STAG3Q9UJ98 1225 aa15.29■□□□□ 0.04
MTMR3-208ENST00000480776 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
MTMR3-208ENST00000480776 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.01
MTMR3-208ENST00000480776 FBXO3Q9UK99 471 aa15.13■□□□□ 0.01
MTMR3-208ENST00000480776 PIP4P2Q8N4L2 257 aa15.11■□□□□ 0.01
MTMR3-208ENST00000480776 PRKAR2AP13861 404 aaKnown RBP15.02■□□□□ -0
MTMR3-208ENST00000480776 CHADLQ6NUI6 762 aa15.01□□□□□ -0.01
MTMR3-208ENST00000480776 CREBZFQ9NS37 354 aa14.99□□□□□ -0.01
MTMR3-208ENST00000480776 POTEHQ6S545 545 aa14.97□□□□□ -0.01
MTMR3-208ENST00000480776 MIER1Q8N108 512 aa14.96□□□□□ -0.01
MTMR3-208ENST00000480776 VASPP50552 380 aaPredicted RBP14.92□□□□□ -0.02
MTMR3-208ENST00000480776 PLCD3Q8N3E9 789 aa14.92□□□□□ -0.02
MTMR3-208ENST00000480776 PLEKHG5O94827 1062 aa14.88□□□□□ -0.03
MTMR3-208ENST00000480776 FARP1Q9Y4F1 1045 aaPredicted RBP14.84□□□□□ -0.03
MTMR3-208ENST00000480776 MNX1P50219 401 aaPredicted RBP14.81□□□□□ -0.04
MTMR3-208ENST00000480776 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
MTMR3-208ENST00000480776 ZBTB47Q9UFB7 747 aaPredicted RBP14.74□□□□□ -0.05
MTMR3-208ENST00000480776 IFNLR1Q8IU57 520 aaPredicted RBP14.73□□□□□ -0.05
MTMR3-208ENST00000480776 KLHL34Q8N239 644 aa14.72□□□□□ -0.05
MTMR3-208ENST00000480776 HAX1O00165 279 aa14.67□□□□□ -0.06
MTMR3-208ENST00000480776 C19orf67A6NJJ6 358 aa14.63□□□□□ -0.07
MTMR3-208ENST00000480776 CD44P16070 742 aaKnown RBP14.58□□□□□ -0.08
MTMR3-208ENST00000480776 NUBP1P53384 320 aa14.58□□□□□ -0.08
MTMR3-208ENST00000480776 SPOCK2Q92563 424 aa14.57□□□□□ -0.08
MTMR3-208ENST00000480776 EVX2Q03828 476 aa14.54□□□□□ -0.08
MTMR3-208ENST00000480776 RASEFQ8IZ41 740 aa14.54□□□□□ -0.08
MTMR3-208ENST00000480776 PAK3O75914 559 aaPredicted RBP14.51□□□□□ -0.09
MTMR3-208ENST00000480776 TSPYL2Q9H2G4 693 aaPredicted RBP14.5□□□□□ -0.09
MTMR3-208ENST00000480776 ZRANB1Q9UGI0 708 aa14.49□□□□□ -0.09
MTMR3-208ENST00000480776 DCAF8Q5TAQ9 597 aa14.45□□□□□ -0.1
MTMR3-208ENST00000480776 FAM212AQ96EL1 285 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms