RNA–Protein interactions for RNA: ENST00000480466.2

CNTNAP3B-207, Transcript of contactin associated protein like 3B, humanhuman

TSL 5

Gene CNTNAP3B, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-207ENST00000480466 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
CNTNAP3B-207ENST00000480466 CHIC1Q5VXU3 224 aa21.91■■□□□ 1.1
CNTNAP3B-207ENST00000480466 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
CNTNAP3B-207ENST00000480466 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
CNTNAP3B-207ENST00000480466 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
CNTNAP3B-207ENST00000480466 FOXD1Q16676 465 aa17.53■□□□□ 0.4
CNTNAP3B-207ENST00000480466 ADRA2BP18089 450 aa16.91■□□□□ 0.3
CNTNAP3B-207ENST00000480466 PPP6R1Q9UPN7 881 aa16.91■□□□□ 0.3
CNTNAP3B-207ENST00000480466 MSH5O43196 834 aa16.57■□□□□ 0.24
CNTNAP3B-207ENST00000480466 PIAS4Q8N2W9 510 aaPredicted RBP16.47■□□□□ 0.23
CNTNAP3B-207ENST00000480466 POTEDQ86YR6 584 aa16.26■□□□□ 0.19
CNTNAP3B-207ENST00000480466 PPP4R3CPQ6ZMV5 832 aa15.79■□□□□ 0.12
CNTNAP3B-207ENST00000480466 KCNA4P22459 653 aa15.64■□□□□ 0.09
CNTNAP3B-207ENST00000480466 SCAF1Q9H7N4 1312 aaKnown RBP15.59■□□□□ 0.09
CNTNAP3B-207ENST00000480466 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
CNTNAP3B-207ENST00000480466 CNKSR2Q8WXI2 1034 aa15.34■□□□□ 0.05
CNTNAP3B-207ENST00000480466 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.04
CNTNAP3B-207ENST00000480466 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
CNTNAP3B-207ENST00000480466 DMRT2Q9Y5R5 561 aa15.06■□□□□ 0
CNTNAP3B-207ENST00000480466 SLC4A1APQ9BWU0 796 aaKnown RBP14.97□□□□□ -0.01
CNTNAP3B-207ENST00000480466 RNF216Q9NWF9 866 aaPredicted RBP14.97□□□□□ -0.01
CNTNAP3B-207ENST00000480466 HOXD11P31277 338 aaPredicted RBP14.85□□□□□ -0.03
CNTNAP3B-207ENST00000480466 DNAJC5BQ9UF47 199 aa14.82□□□□□ -0.04
CNTNAP3B-207ENST00000480466 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
CNTNAP3B-207ENST00000480466 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
CNTNAP3B-207ENST00000480466 DCAF8L1A6NGE4 600 aa14.37□□□□□ -0.11
CNTNAP3B-207ENST00000480466 ZBTB22O15209 634 aa14.37□□□□□ -0.11
CNTNAP3B-207ENST00000480466 FOXD4L1Q9NU39 408 aa14.37□□□□□ -0.11
CNTNAP3B-207ENST00000480466 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
CNTNAP3B-207ENST00000480466 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
CNTNAP3B-207ENST00000480466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.15□□□□□ -0.14
CNTNAP3B-207ENST00000480466 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
CNTNAP3B-207ENST00000480466 RNF39Q9H2S5 420 aa14.06□□□□□ -0.16
CNTNAP3B-207ENST00000480466 ATXN8OSP0DMR3 200 aa13.92□□□□□ -0.18
CNTNAP3B-207ENST00000480466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.91□□□□□ -0.18
CNTNAP3B-207ENST00000480466 C1QBPQ07021 282 aaKnown RBP13.91□□□□□ -0.18
CNTNAP3B-207ENST00000480466 HNRNPUL2Q1KMD3 747 aaKnown RBP13.91□□□□□ -0.18
CNTNAP3B-207ENST00000480466 U3KPZ7 1027 aaPredicted RBP13.9□□□□□ -0.18
CNTNAP3B-207ENST00000480466 SAMD1Q6SPF0 538 aaPredicted RBP13.84□□□□□ -0.19
CNTNAP3B-207ENST00000480466 APLP2Q06481 763 aa13.72□□□□□ -0.21
CNTNAP3B-207ENST00000480466 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
CNTNAP3B-207ENST00000480466 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
CNTNAP3B-207ENST00000480466 SPINK5Q9NQ38 1064 aaPredicted RBP13.43□□□□□ -0.26
CNTNAP3B-207ENST00000480466 CAPN15O75808 1086 aa13.4□□□□□ -0.26
CNTNAP3B-207ENST00000480466 TRHP20396 242 aaPredicted RBP13.38□□□□□ -0.27
CNTNAP3B-207ENST00000480466 POLA2Q14181 598 aa13.24□□□□□ -0.29
CNTNAP3B-207ENST00000480466 ABCB7O75027 752 aa13.13□□□□□ -0.31
CNTNAP3B-207ENST00000480466 DSG3P32926 999 aa13.13□□□□□ -0.31
CNTNAP3B-207ENST00000480466 FBLN2P98095 1184 aa13.12□□□□□ -0.31
CNTNAP3B-207ENST00000480466 FKBP8Q14318 412 aa13.1□□□□□ -0.31
CNTNAP3B-207ENST00000480466 ZBTB12Q9Y330 459 aaPredicted RBP13.1□□□□□ -0.31
CNTNAP3B-207ENST00000480466 MKRN4PQ13434 485 aaPredicted RBP13.05□□□□□ -0.32
CNTNAP3B-207ENST00000480466 SPDYE4A6NLX3 237 aa12.9□□□□□ -0.34
CNTNAP3B-207ENST00000480466 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
CNTNAP3B-207ENST00000480466 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
CNTNAP3B-207ENST00000480466 SPDYE2Q495Y8 402 aa12.74□□□□□ -0.37
CNTNAP3B-207ENST00000480466 POTEHQ6S545 545 aa12.74□□□□□ -0.37
CNTNAP3B-207ENST00000480466 PROM2Q8N271 834 aa12.74□□□□□ -0.37
CNTNAP3B-207ENST00000480466 OSCARQ8IYS5 282 aa12.73□□□□□ -0.37
CNTNAP3B-207ENST00000480466 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
CNTNAP3B-207ENST00000480466 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
CNTNAP3B-207ENST00000480466 RBM42Q9BTD8 480 aaKnown RBP12.63□□□□□ -0.39
CNTNAP3B-207ENST00000480466 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
CNTNAP3B-207ENST00000480466 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
CNTNAP3B-207ENST00000480466 AKT1S1Q96B36 256 aa12.44□□□□□ -0.42
CNTNAP3B-207ENST00000480466 STAG3Q9UJ98 1225 aa12.44□□□□□ -0.42
CNTNAP3B-207ENST00000480466 VASPP50552 380 aaPredicted RBP12.42□□□□□ -0.42
CNTNAP3B-207ENST00000480466 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
CNTNAP3B-207ENST00000480466 CHRDL2Q6WN34 429 aa12.31□□□□□ -0.44
CNTNAP3B-207ENST00000480466 SPDYE1Q8NFV5 336 aaPredicted RBP12.3□□□□□ -0.44
CNTNAP3B-207ENST00000480466 REM2Q8IYK8 340 aaPredicted RBP12.29□□□□□ -0.44
CNTNAP3B-207ENST00000480466 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
CNTNAP3B-207ENST00000480466 IFNLR1Q8IU57 520 aaPredicted RBP12.26□□□□□ -0.45
CNTNAP3B-207ENST00000480466 MIER1Q8N108 512 aa12.24□□□□□ -0.45
CNTNAP3B-207ENST00000480466 PLCD3Q8N3E9 789 aa12.24□□□□□ -0.45
CNTNAP3B-207ENST00000480466 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
CNTNAP3B-207ENST00000480466 CLEC11AQ9Y240 323 aa12.19□□□□□ -0.46
CNTNAP3B-207ENST00000480466 KLHL34Q8N239 644 aa12.18□□□□□ -0.46
CNTNAP3B-207ENST00000480466 PRR29P0C7W0 189 aa12.16□□□□□ -0.46
CNTNAP3B-207ENST00000480466 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
CNTNAP3B-207ENST00000480466 PITPNM1O00562 1244 aa12.12□□□□□ -0.47
CNTNAP3B-207ENST00000480466 SPOCK2Q92563 424 aa12.11□□□□□ -0.47
CNTNAP3B-207ENST00000480466 CREBZFQ9NS37 354 aa12.01□□□□□ -0.49
CNTNAP3B-207ENST00000480466 PIP4P2Q8N4L2 257 aa11.97□□□□□ -0.49
CNTNAP3B-207ENST00000480466 PKD2Q13563 968 aa11.93□□□□□ -0.5
CNTNAP3B-207ENST00000480466 MNX1P50219 401 aaPredicted RBP11.92□□□□□ -0.5
CNTNAP3B-207ENST00000480466 SP7Q8TDD2 431 aaPredicted RBP11.91□□□□□ -0.5
CNTNAP3B-207ENST00000480466 NPM1P06748 294 aaKnown RBP eCLIP11.89□□□□□ -0.51
CNTNAP3B-207ENST00000480466 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
CNTNAP3B-207ENST00000480466 NUBP1P53384 320 aa11.87□□□□□ -0.51
CNTNAP3B-207ENST00000480466 CIZ1Q9ULV3 898 aaPredicted RBP11.86□□□□□ -0.51
CNTNAP3B-207ENST00000480466 GSE1Q14687 1217 aa11.85□□□□□ -0.51
CNTNAP3B-207ENST00000480466 CHADLQ6NUI6 762 aa11.84□□□□□ -0.51
CNTNAP3B-207ENST00000480466 ECM2O94769 699 aaPredicted RBP11.83□□□□□ -0.52
CNTNAP3B-207ENST00000480466 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
CNTNAP3B-207ENST00000480466 TRIM41Q8WV44 630 aa11.83□□□□□ -0.52
CNTNAP3B-207ENST00000480466 HAX1O00165 279 aa11.8□□□□□ -0.52
CNTNAP3B-207ENST00000480466 DCAF8Q5TAQ9 597 aa11.8□□□□□ -0.52
CNTNAP3B-207ENST00000480466 FAM212AQ96EL1 285 aa11.8□□□□□ -0.52
CNTNAP3B-207ENST00000480466 FARP1Q9Y4F1 1045 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms