RNA–Protein interactions for RNA: ENST00000480006.1

CCSER2-205, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2

Gene CCSER2, Length 772 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-205ENST00000480006 AEBP2Q6ZN18 517 aaPredicted RBP26.06■■□□□ 1.76
CCSER2-205ENST00000480006 CHIC1Q5VXU3 224 aa24.48■■□□□ 1.51
CCSER2-205ENST00000480006 SENP3Q9H4L4 574 aaPredicted RBP22.32■■□□□ 1.16
CCSER2-205ENST00000480006 PHF23Q9BUL5 403 aaPredicted RBP21.99■■□□□ 1.11
CCSER2-205ENST00000480006 FOXD1Q16676 465 aa20.85■□□□□ 0.93
CCSER2-205ENST00000480006 POTEDQ86YR6 584 aa19.97■□□□□ 0.79
CCSER2-205ENST00000480006 PLPPR3Q6T4P5 718 aa19.78■□□□□ 0.76
CCSER2-205ENST00000480006 MSH5O43196 834 aa19.69■□□□□ 0.74
CCSER2-205ENST00000480006 PIAS4Q8N2W9 510 aaPredicted RBP19.4■□□□□ 0.7
CCSER2-205ENST00000480006 PPP6R1Q9UPN7 881 aa19.16■□□□□ 0.66
CCSER2-205ENST00000480006 ADRA2BP18089 450 aa19.1■□□□□ 0.65
CCSER2-205ENST00000480006 MAPK8IP2Q13387 824 aaPredicted RBP17.68■□□□□ 0.42
CCSER2-205ENST00000480006 DMRT2Q9Y5R5 561 aa17.61■□□□□ 0.41
CCSER2-205ENST00000480006 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
CCSER2-205ENST00000480006 PPP4R3CPQ6ZMV5 832 aa17.36■□□□□ 0.37
CCSER2-205ENST00000480006 CACNB1Q02641 598 aaPredicted RBP17.22■□□□□ 0.35
CCSER2-205ENST00000480006 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
CCSER2-205ENST00000480006 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
CCSER2-205ENST00000480006 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
CCSER2-205ENST00000480006 HOXD11P31277 338 aaPredicted RBP16.78■□□□□ 0.28
CCSER2-205ENST00000480006 RNF39Q9H2S5 420 aa16.75■□□□□ 0.27
CCSER2-205ENST00000480006 RNF216Q9NWF9 866 aaPredicted RBP16.72■□□□□ 0.27
CCSER2-205ENST00000480006 KCNA4P22459 653 aa16.59■□□□□ 0.25
CCSER2-205ENST00000480006 NPM3O75607 178 aaKnown RBP16.56■□□□□ 0.24
CCSER2-205ENST00000480006 C1QBPQ07021 282 aaKnown RBP16.49■□□□□ 0.23
CCSER2-205ENST00000480006 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
CCSER2-205ENST00000480006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.07■□□□□ 0.16
CCSER2-205ENST00000480006 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
CCSER2-205ENST00000480006 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
CCSER2-205ENST00000480006 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
CCSER2-205ENST00000480006 CAPN15O75808 1086 aa15.58■□□□□ 0.08
CCSER2-205ENST00000480006 POTEHQ6S545 545 aa15.58■□□□□ 0.08
CCSER2-205ENST00000480006 SPINK5Q9NQ38 1064 aaPredicted RBP15.55■□□□□ 0.08
CCSER2-205ENST00000480006 DSG3P32926 999 aa15.54■□□□□ 0.08
CCSER2-205ENST00000480006 FOXD4L1Q9NU39 408 aa15.4■□□□□ 0.06
CCSER2-205ENST00000480006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
CCSER2-205ENST00000480006 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
CCSER2-205ENST00000480006 MYCNP04198 464 aaPredicted RBP15.34■□□□□ 0.05
CCSER2-205ENST00000480006 APLP2Q06481 763 aa15.31■□□□□ 0.04
CCSER2-205ENST00000480006 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
CCSER2-205ENST00000480006 ZBTB22O15209 634 aa15.24■□□□□ 0.03
CCSER2-205ENST00000480006 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
CCSER2-205ENST00000480006 ABCB7O75027 752 aa15.18■□□□□ 0.02
CCSER2-205ENST00000480006 ZNF219Q9P2Y4 722 aaPredicted RBP15.14■□□□□ 0.01
CCSER2-205ENST00000480006 ATXN8OSP0DMR3 200 aa14.98□□□□□ -0.01
CCSER2-205ENST00000480006 CSRNP3Q8WYN3 585 aa14.98□□□□□ -0.01
CCSER2-205ENST00000480006 EHMT2Q96KQ7 1210 aa14.9□□□□□ -0.02
CCSER2-205ENST00000480006 ATF5Q9Y2D1 282 aaPredicted RBP14.87□□□□□ -0.03
CCSER2-205ENST00000480006 RBM42Q9BTD8 480 aaKnown RBP14.86□□□□□ -0.03
CCSER2-205ENST00000480006 POLA2Q14181 598 aa14.75□□□□□ -0.05
CCSER2-205ENST00000480006 CHRDL2Q6WN34 429 aa14.71□□□□□ -0.05
CCSER2-205ENST00000480006 ZBTB12Q9Y330 459 aaPredicted RBP14.56□□□□□ -0.08
CCSER2-205ENST00000480006 AKT1S1Q96B36 256 aa14.42□□□□□ -0.1
CCSER2-205ENST00000480006 SP7Q8TDD2 431 aaPredicted RBP14.39□□□□□ -0.11
CCSER2-205ENST00000480006 FBLN2P98095 1184 aa14.34□□□□□ -0.11
CCSER2-205ENST00000480006 REM2Q8IYK8 340 aaPredicted RBP14.29□□□□□ -0.12
CCSER2-205ENST00000480006 PIP4P2Q8N4L2 257 aa14.26□□□□□ -0.13
CCSER2-205ENST00000480006 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
CCSER2-205ENST00000480006 OSCARQ8IYS5 282 aa14.22□□□□□ -0.13
CCSER2-205ENST00000480006 HAX1O00165 279 aa14.18□□□□□ -0.14
CCSER2-205ENST00000480006 SPDYE2BA6NHP3 402 aa14.13□□□□□ -0.15
CCSER2-205ENST00000480006 PITPNM1O00562 1244 aa14.13□□□□□ -0.15
CCSER2-205ENST00000480006 SPDYE6P0CI01 402 aa14.13□□□□□ -0.15
CCSER2-205ENST00000480006 SPDYE2Q495Y8 402 aa14.13□□□□□ -0.15
CCSER2-205ENST00000480006 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.16
CCSER2-205ENST00000480006 ZNF692Q9BU19 519 aaPredicted RBP13.99□□□□□ -0.17
CCSER2-205ENST00000480006 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
CCSER2-205ENST00000480006 EVX2Q03828 476 aa13.91□□□□□ -0.18
CCSER2-205ENST00000480006 SPDYE4A6NLX3 237 aa13.81□□□□□ -0.2
CCSER2-205ENST00000480006 PRKAR2AP13861 404 aaKnown RBP13.79□□□□□ -0.2
CCSER2-205ENST00000480006 CLEC11AQ9Y240 323 aa13.79□□□□□ -0.2
CCSER2-205ENST00000480006 PABPN1Q86U42 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCSER2-205ENST00000480006 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
CCSER2-205ENST00000480006 C19orf67A6NJJ6 358 aa13.65□□□□□ -0.22
CCSER2-205ENST00000480006 PROM2Q8N271 834 aa13.6□□□□□ -0.23
CCSER2-205ENST00000480006 GABBR2O75899 941 aa13.59□□□□□ -0.23
CCSER2-205ENST00000480006 STAG3Q9UJ98 1225 aa13.59□□□□□ -0.23
CCSER2-205ENST00000480006 CHADLQ6NUI6 762 aa13.54□□□□□ -0.24
CCSER2-205ENST00000480006 PRR29P0C7W0 189 aa13.53□□□□□ -0.24
CCSER2-205ENST00000480006 FKBP8Q14318 412 aa13.51□□□□□ -0.25
CCSER2-205ENST00000480006 LHX8Q68G74 356 aa13.51□□□□□ -0.25
CCSER2-205ENST00000480006 CD44P16070 742 aaKnown RBP13.32□□□□□ -0.28
CCSER2-205ENST00000480006 FARP1Q9Y4F1 1045 aaPredicted RBP13.29□□□□□ -0.28
CCSER2-205ENST00000480006 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
CCSER2-205ENST00000480006 POTEIP0CG38 1075 aa13.27□□□□□ -0.29
CCSER2-205ENST00000480006 FBXO3Q9UK99 471 aa13.22□□□□□ -0.29
CCSER2-205ENST00000480006 CLCN6P51797 869 aa13.2□□□□□ -0.3
CCSER2-205ENST00000480006 DCBLD2Q96PD2 775 aa13.17□□□□□ -0.3
CCSER2-205ENST00000480006 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
CCSER2-205ENST00000480006 MIER1Q8N108 512 aa13.13□□□□□ -0.31
CCSER2-205ENST00000480006 PLEKHG5O94827 1062 aa13.12□□□□□ -0.31
CCSER2-205ENST00000480006 NPM1P06748 294 aaKnown RBP eCLIP13.11□□□□□ -0.31
CCSER2-205ENST00000480006 ZRANB1Q9UGI0 708 aa13.08□□□□□ -0.32
CCSER2-205ENST00000480006 PLCD3Q8N3E9 789 aa13.06□□□□□ -0.32
CCSER2-205ENST00000480006 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
CCSER2-205ENST00000480006 PLSCR2Q9NRY7 297 aa13.06□□□□□ -0.32
CCSER2-205ENST00000480006 ZBTB47Q9UFB7 747 aaPredicted RBP13.02□□□□□ -0.33
CCSER2-205ENST00000480006 VASPP50552 380 aaPredicted RBP12.98□□□□□ -0.33
CCSER2-205ENST00000480006 GALR2O43603 387 aaPredicted RBP12.95□□□□□ -0.34
CCSER2-205ENST00000480006 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms