RNA–Protein interactions for RNA: ENST00000479859.1

UBXN2A-204, Transcript of UBX domain protein 2A, humanhuman

TSL 2

Gene UBXN2A, Length 403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-204ENST00000479859 AEBP2Q6ZN18 517 aaPredicted RBP28.24■■■□□ 2.11
UBXN2A-204ENST00000479859 CHIC1Q5VXU3 224 aa28.06■■■□□ 2.08
UBXN2A-204ENST00000479859 PHF23Q9BUL5 403 aaPredicted RBP24.72■■□□□ 1.55
UBXN2A-204ENST00000479859 SENP3Q9H4L4 574 aaPredicted RBP23.89■■□□□ 1.41
UBXN2A-204ENST00000479859 PLPPR3Q6T4P5 718 aa22.99■■□□□ 1.27
UBXN2A-204ENST00000479859 FOXD1Q16676 465 aa22.11■■□□□ 1.13
UBXN2A-204ENST00000479859 ADRA2BP18089 450 aa21.66■■□□□ 1.06
UBXN2A-204ENST00000479859 PPP6R1Q9UPN7 881 aa21.65■■□□□ 1.06
UBXN2A-204ENST00000479859 PIAS4Q8N2W9 510 aaPredicted RBP20.98■□□□□ 0.95
UBXN2A-204ENST00000479859 KCNA4P22459 653 aa20.38■□□□□ 0.85
UBXN2A-204ENST00000479859 PPP4R3CPQ6ZMV5 832 aa20.32■□□□□ 0.84
UBXN2A-204ENST00000479859 MSH5O43196 834 aa20.21■□□□□ 0.83
UBXN2A-204ENST00000479859 NCBP3Q53F19 620 aaKnown RBP19.92■□□□□ 0.78
UBXN2A-204ENST00000479859 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
UBXN2A-204ENST00000479859 CNKSR2Q8WXI2 1034 aa19.65■□□□□ 0.74
UBXN2A-204ENST00000479859 NPM3O75607 178 aaKnown RBP19.63■□□□□ 0.73
UBXN2A-204ENST00000479859 MAPK8IP2Q13387 824 aaPredicted RBP19.5■□□□□ 0.71
UBXN2A-204ENST00000479859 SLC4A1APQ9BWU0 796 aaKnown RBP19.5■□□□□ 0.71
UBXN2A-204ENST00000479859 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
UBXN2A-204ENST00000479859 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
UBXN2A-204ENST00000479859 RNF216Q9NWF9 866 aaPredicted RBP19.14■□□□□ 0.65
UBXN2A-204ENST00000479859 CSRNP3Q8WYN3 585 aa19.05■□□□□ 0.64
UBXN2A-204ENST00000479859 DNAJC5BQ9UF47 199 aa18.99■□□□□ 0.63
UBXN2A-204ENST00000479859 HOXD11P31277 338 aaPredicted RBP18.94■□□□□ 0.62
UBXN2A-204ENST00000479859 ZBTB22O15209 634 aa18.77■□□□□ 0.6
UBXN2A-204ENST00000479859 FOXD4L1Q9NU39 408 aa18.64■□□□□ 0.57
UBXN2A-204ENST00000479859 SLC4A2P04920 1241 aa18.42■□□□□ 0.54
UBXN2A-204ENST00000479859 DCAF8L1A6NGE4 600 aa18.29■□□□□ 0.52
UBXN2A-204ENST00000479859 MYCNP04198 464 aaPredicted RBP18.14■□□□□ 0.49
UBXN2A-204ENST00000479859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.05■□□□□ 0.48
UBXN2A-204ENST00000479859 ATXN8OSP0DMR3 200 aa17.94■□□□□ 0.46
UBXN2A-204ENST00000479859 U3KPZ7 1027 aaPredicted RBP17.81■□□□□ 0.44
UBXN2A-204ENST00000479859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
UBXN2A-204ENST00000479859 HNRNPUL2Q1KMD3 747 aaKnown RBP17.75■□□□□ 0.43
UBXN2A-204ENST00000479859 SAMD1Q6SPF0 538 aaPredicted RBP17.71■□□□□ 0.43
UBXN2A-204ENST00000479859 ATF5Q9Y2D1 282 aaPredicted RBP17.6■□□□□ 0.41
UBXN2A-204ENST00000479859 POTEDQ86YR6 584 aa17.57■□□□□ 0.4
UBXN2A-204ENST00000479859 APLP2Q06481 763 aa17.46■□□□□ 0.39
UBXN2A-204ENST00000479859 RNF39Q9H2S5 420 aa17.36■□□□□ 0.37
UBXN2A-204ENST00000479859 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
UBXN2A-204ENST00000479859 FKBP8Q14318 412 aa17.2■□□□□ 0.34
UBXN2A-204ENST00000479859 C1QBPQ07021 282 aaKnown RBP17.18■□□□□ 0.34
UBXN2A-204ENST00000479859 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
UBXN2A-204ENST00000479859 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
UBXN2A-204ENST00000479859 CAPN15O75808 1086 aa17.08■□□□□ 0.32
UBXN2A-204ENST00000479859 POLA2Q14181 598 aa16.94■□□□□ 0.3
UBXN2A-204ENST00000479859 MKRN4PQ13434 485 aaPredicted RBP16.87■□□□□ 0.29
UBXN2A-204ENST00000479859 FBLN2P98095 1184 aa16.84■□□□□ 0.29
UBXN2A-204ENST00000479859 ABCB7O75027 752 aa16.8■□□□□ 0.28
UBXN2A-204ENST00000479859 SPDYE4A6NLX3 237 aa16.72■□□□□ 0.27
UBXN2A-204ENST00000479859 ZBTB12Q9Y330 459 aaPredicted RBP16.71■□□□□ 0.27
UBXN2A-204ENST00000479859 DSG3P32926 999 aa16.69■□□□□ 0.26
UBXN2A-204ENST00000479859 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
UBXN2A-204ENST00000479859 PROM2Q8N271 834 aa16.52■□□□□ 0.24
UBXN2A-204ENST00000479859 AMER1Q5JTC6 1135 aaPredicted RBP16.51■□□□□ 0.23
UBXN2A-204ENST00000479859 RTN4Q9NQC3 1192 aaKnown RBP16.47■□□□□ 0.23
UBXN2A-204ENST00000479859 FBXO3Q9UK99 471 aa16.45■□□□□ 0.22
UBXN2A-204ENST00000479859 OSCARQ8IYS5 282 aa16.36■□□□□ 0.21
UBXN2A-204ENST00000479859 SPDYE2BA6NHP3 402 aa16.3■□□□□ 0.2
UBXN2A-204ENST00000479859 SPDYE6P0CI01 402 aa16.3■□□□□ 0.2
UBXN2A-204ENST00000479859 SPDYE2Q495Y8 402 aa16.3■□□□□ 0.2
UBXN2A-204ENST00000479859 ZNF692Q9BU19 519 aaPredicted RBP16.3■□□□□ 0.2
UBXN2A-204ENST00000479859 SSUH2Q9Y2M2 353 aa16.23■□□□□ 0.19
UBXN2A-204ENST00000479859 VASPP50552 380 aaPredicted RBP16.22■□□□□ 0.19
UBXN2A-204ENST00000479859 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.17
UBXN2A-204ENST00000479859 IFNLR1Q8IU57 520 aaPredicted RBP16.03■□□□□ 0.16
UBXN2A-204ENST00000479859 SLC24A1O60721 1099 aa16.01■□□□□ 0.15
UBXN2A-204ENST00000479859 STAG3Q9UJ98 1225 aa16.01■□□□□ 0.15
UBXN2A-204ENST00000479859 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
UBXN2A-204ENST00000479859 PLCD3Q8N3E9 789 aa15.84■□□□□ 0.13
UBXN2A-204ENST00000479859 KLHL34Q8N239 644 aa15.83■□□□□ 0.12
UBXN2A-204ENST00000479859 MIER1Q8N108 512 aa15.8■□□□□ 0.12
UBXN2A-204ENST00000479859 AKT1S1Q96B36 256 aa15.8■□□□□ 0.12
UBXN2A-204ENST00000479859 SPOCK2Q92563 424 aa15.77■□□□□ 0.12
UBXN2A-204ENST00000479859 PLEKHG5O94827 1062 aa15.7■□□□□ 0.1
UBXN2A-204ENST00000479859 SPDYE1Q8NFV5 336 aaPredicted RBP15.7■□□□□ 0.1
UBXN2A-204ENST00000479859 PKD2Q13563 968 aa15.67■□□□□ 0.1
UBXN2A-204ENST00000479859 REM2Q8IYK8 340 aaPredicted RBP15.64■□□□□ 0.09
UBXN2A-204ENST00000479859 ZBTB47Q9UFB7 747 aaPredicted RBP15.64■□□□□ 0.09
UBXN2A-204ENST00000479859 CLEC11AQ9Y240 323 aa15.61■□□□□ 0.09
UBXN2A-204ENST00000479859 PRR29P0C7W0 189 aa15.54■□□□□ 0.08
UBXN2A-204ENST00000479859 DCAF8L2P0C7V8 631 aa15.51■□□□□ 0.07
UBXN2A-204ENST00000479859 ECM2O94769 699 aaPredicted RBP15.5■□□□□ 0.07
UBXN2A-204ENST00000479859 PITPNM1O00562 1244 aa15.46■□□□□ 0.07
UBXN2A-204ENST00000479859 CREBZFQ9NS37 354 aa15.45■□□□□ 0.06
UBXN2A-204ENST00000479859 CIZ1Q9ULV3 898 aaPredicted RBP15.44■□□□□ 0.06
UBXN2A-204ENST00000479859 NUBP1P53384 320 aa15.36■□□□□ 0.05
UBXN2A-204ENST00000479859 MNX1P50219 401 aaPredicted RBP15.34■□□□□ 0.05
UBXN2A-204ENST00000479859 RGL2O15211 777 aa15.33■□□□□ 0.04
UBXN2A-204ENST00000479859 GSE1Q14687 1217 aa15.32■□□□□ 0.04
UBXN2A-204ENST00000479859 TRIM41Q8WV44 630 aa15.32■□□□□ 0.04
UBXN2A-204ENST00000479859 PLCB2Q00722 1185 aa15.26■□□□□ 0.03
UBXN2A-204ENST00000479859 DCAF8Q5TAQ9 597 aa15.26■□□□□ 0.03
UBXN2A-204ENST00000479859 FAM212AQ96EL1 285 aa15.23■□□□□ 0.03
UBXN2A-204ENST00000479859 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
UBXN2A-204ENST00000479859 CHADLQ6NUI6 762 aa15.18■□□□□ 0.02
UBXN2A-204ENST00000479859 RASEFQ8IZ41 740 aa15.18■□□□□ 0.02
UBXN2A-204ENST00000479859 BBXQ8WY36 941 aaPredicted RBP15.16■□□□□ 0.02
UBXN2A-204ENST00000479859 RNF25Q96BH1 459 aaPredicted RBP15.11■□□□□ 0.01
UBXN2A-204ENST00000479859 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms