RNA–Protein interactions for RNA: ENST00000479772.1

GRIN3A-202, Transcript of glutamate ionotropic receptor NMDA type subunit 3A, humanhuman

TSL 3

Gene GRIN3A, Length 498 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3A-202ENST00000479772 AEBP2Q6ZN18 517 aaPredicted RBP24.24■■□□□ 1.47
GRIN3A-202ENST00000479772 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
GRIN3A-202ENST00000479772 SENP3Q9H4L4 574 aaPredicted RBP20.62■□□□□ 0.89
GRIN3A-202ENST00000479772 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
GRIN3A-202ENST00000479772 FOXD1Q16676 465 aa19.16■□□□□ 0.66
GRIN3A-202ENST00000479772 PLPPR3Q6T4P5 718 aa18.92■□□□□ 0.62
GRIN3A-202ENST00000479772 PPP6R1Q9UPN7 881 aa18.24■□□□□ 0.51
GRIN3A-202ENST00000479772 ADRA2BP18089 450 aa18.2■□□□□ 0.5
GRIN3A-202ENST00000479772 PIAS4Q8N2W9 510 aaPredicted RBP18.01■□□□□ 0.47
GRIN3A-202ENST00000479772 MSH5O43196 834 aa17.78■□□□□ 0.44
GRIN3A-202ENST00000479772 SCAF1Q9H7N4 1312 aaKnown RBP16.67■□□□□ 0.26
GRIN3A-202ENST00000479772 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
GRIN3A-202ENST00000479772 POTEDQ86YR6 584 aa16.63■□□□□ 0.25
GRIN3A-202ENST00000479772 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
GRIN3A-202ENST00000479772 DMRT2Q9Y5R5 561 aa16.42■□□□□ 0.22
GRIN3A-202ENST00000479772 CNKSR2Q8WXI2 1034 aa16.23■□□□□ 0.19
GRIN3A-202ENST00000479772 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
GRIN3A-202ENST00000479772 HOXD11P31277 338 aaPredicted RBP15.99■□□□□ 0.15
GRIN3A-202ENST00000479772 RNF216Q9NWF9 866 aaPredicted RBP15.98■□□□□ 0.15
GRIN3A-202ENST00000479772 KCNA4P22459 653 aa15.95■□□□□ 0.14
GRIN3A-202ENST00000479772 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
GRIN3A-202ENST00000479772 DCAF8L1A6NGE4 600 aa15.7■□□□□ 0.1
GRIN3A-202ENST00000479772 DNAJC5BQ9UF47 199 aa15.49■□□□□ 0.07
GRIN3A-202ENST00000479772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.22■□□□□ 0.03
GRIN3A-202ENST00000479772 RNF39Q9H2S5 420 aa15.21■□□□□ 0.03
GRIN3A-202ENST00000479772 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
GRIN3A-202ENST00000479772 SLC4A2P04920 1241 aa15.07■□□□□ 0
GRIN3A-202ENST00000479772 C1QBPQ07021 282 aaKnown RBP15.02■□□□□ -0
GRIN3A-202ENST00000479772 CACNB1Q02641 598 aaPredicted RBP14.99□□□□□ -0.01
GRIN3A-202ENST00000479772 U3KPZ7 1027 aaPredicted RBP14.95□□□□□ -0.02
GRIN3A-202ENST00000479772 FOXD4L1Q9NU39 408 aa14.77□□□□□ -0.05
GRIN3A-202ENST00000479772 MYCNP04198 464 aaPredicted RBP14.69□□□□□ -0.06
GRIN3A-202ENST00000479772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.67□□□□□ -0.06
GRIN3A-202ENST00000479772 ZBTB22O15209 634 aa14.67□□□□□ -0.06
GRIN3A-202ENST00000479772 HNRNPUL2Q1KMD3 747 aaKnown RBP14.67□□□□□ -0.06
GRIN3A-202ENST00000479772 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
GRIN3A-202ENST00000479772 SPINK5Q9NQ38 1064 aaPredicted RBP14.6□□□□□ -0.07
GRIN3A-202ENST00000479772 APLP2Q06481 763 aa14.59□□□□□ -0.07
GRIN3A-202ENST00000479772 CAPN15O75808 1086 aa14.56□□□□□ -0.08
GRIN3A-202ENST00000479772 TRHP20396 242 aaPredicted RBP14.42□□□□□ -0.1
GRIN3A-202ENST00000479772 ZNF219Q9P2Y4 722 aaPredicted RBP14.42□□□□□ -0.1
GRIN3A-202ENST00000479772 EHMT2Q96KQ7 1210 aa14.41□□□□□ -0.1
GRIN3A-202ENST00000479772 DSG3P32926 999 aa14.38□□□□□ -0.11
GRIN3A-202ENST00000479772 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
GRIN3A-202ENST00000479772 ATF5Q9Y2D1 282 aaPredicted RBP14.31□□□□□ -0.12
GRIN3A-202ENST00000479772 ATXN8OSP0DMR3 200 aa14.27□□□□□ -0.13
GRIN3A-202ENST00000479772 ABCB7O75027 752 aa14.26□□□□□ -0.13
GRIN3A-202ENST00000479772 POLA2Q14181 598 aa14.14□□□□□ -0.15
GRIN3A-202ENST00000479772 ZBTB12Q9Y330 459 aaPredicted RBP13.9□□□□□ -0.18
GRIN3A-202ENST00000479772 FBLN2P98095 1184 aa13.73□□□□□ -0.21
GRIN3A-202ENST00000479772 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
GRIN3A-202ENST00000479772 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
GRIN3A-202ENST00000479772 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
GRIN3A-202ENST00000479772 SPDYE2BA6NHP3 402 aa13.5□□□□□ -0.25
GRIN3A-202ENST00000479772 SPDYE6P0CI01 402 aa13.5□□□□□ -0.25
GRIN3A-202ENST00000479772 SPDYE2Q495Y8 402 aa13.5□□□□□ -0.25
GRIN3A-202ENST00000479772 AKT1S1Q96B36 256 aa13.49□□□□□ -0.25
GRIN3A-202ENST00000479772 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
GRIN3A-202ENST00000479772 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
GRIN3A-202ENST00000479772 REM2Q8IYK8 340 aaPredicted RBP13.35□□□□□ -0.27
GRIN3A-202ENST00000479772 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
GRIN3A-202ENST00000479772 CHRDL2Q6WN34 429 aa13.25□□□□□ -0.29
GRIN3A-202ENST00000479772 PITPNM1O00562 1244 aa13.21□□□□□ -0.29
GRIN3A-202ENST00000479772 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
GRIN3A-202ENST00000479772 SPDYE1Q8NFV5 336 aaPredicted RBP13.16□□□□□ -0.3
GRIN3A-202ENST00000479772 POTEHQ6S545 545 aa13.12□□□□□ -0.31
GRIN3A-202ENST00000479772 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
GRIN3A-202ENST00000479772 FXR2P51116 673 aaKnown RBP eCLIP13.02□□□□□ -0.33
GRIN3A-202ENST00000479772 PIP4P2Q8N4L2 257 aa13.02□□□□□ -0.33
GRIN3A-202ENST00000479772 FKBP8Q14318 412 aa13.01□□□□□ -0.33
GRIN3A-202ENST00000479772 PROM2Q8N271 834 aa13.01□□□□□ -0.33
GRIN3A-202ENST00000479772 PRR29P0C7W0 189 aa12.95□□□□□ -0.34
GRIN3A-202ENST00000479772 STAG3Q9UJ98 1225 aa12.95□□□□□ -0.34
GRIN3A-202ENST00000479772 PRKAR2AP13861 404 aaKnown RBP12.87□□□□□ -0.35
GRIN3A-202ENST00000479772 CHADLQ6NUI6 762 aa12.81□□□□□ -0.36
GRIN3A-202ENST00000479772 CREBZFQ9NS37 354 aa12.73□□□□□ -0.37
GRIN3A-202ENST00000479772 FARP1Q9Y4F1 1045 aaPredicted RBP12.68□□□□□ -0.38
GRIN3A-202ENST00000479772 HAX1O00165 279 aa12.66□□□□□ -0.38
GRIN3A-202ENST00000479772 FBXO3Q9UK99 471 aa12.63□□□□□ -0.39
GRIN3A-202ENST00000479772 C19orf67A6NJJ6 358 aa12.58□□□□□ -0.4
GRIN3A-202ENST00000479772 MIER1Q8N108 512 aa12.58□□□□□ -0.4
GRIN3A-202ENST00000479772 MNX1P50219 401 aaPredicted RBP12.57□□□□□ -0.4
GRIN3A-202ENST00000479772 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
GRIN3A-202ENST00000479772 EVX2Q03828 476 aa12.54□□□□□ -0.4
GRIN3A-202ENST00000479772 PLCD3Q8N3E9 789 aa12.53□□□□□ -0.4
GRIN3A-202ENST00000479772 NPM1P06748 294 aaKnown RBP eCLIP12.51□□□□□ -0.41
GRIN3A-202ENST00000479772 SP7Q8TDD2 431 aaPredicted RBP12.5□□□□□ -0.41
GRIN3A-202ENST00000479772 CD44P16070 742 aaKnown RBP12.49□□□□□ -0.41
GRIN3A-202ENST00000479772 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
GRIN3A-202ENST00000479772 ZBTB47Q9UFB7 747 aaPredicted RBP12.43□□□□□ -0.42
GRIN3A-202ENST00000479772 ZRANB1Q9UGI0 708 aa12.38□□□□□ -0.43
GRIN3A-202ENST00000479772 PAK3O75914 559 aaPredicted RBP12.37□□□□□ -0.43
GRIN3A-202ENST00000479772 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
GRIN3A-202ENST00000479772 NUBP1P53384 320 aa12.3□□□□□ -0.44
GRIN3A-202ENST00000479772 RASEFQ8IZ41 740 aa12.3□□□□□ -0.44
GRIN3A-202ENST00000479772 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
GRIN3A-202ENST00000479772 GABBR2O75899 941 aa12.29□□□□□ -0.44
GRIN3A-202ENST00000479772 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
GRIN3A-202ENST00000479772 IFNLR1Q8IU57 520 aaPredicted RBP12.27□□□□□ -0.45
GRIN3A-202ENST00000479772 CLCN6P51797 869 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms