RNA–Protein interactions for RNA: ENST00000479652.1

ERCC6-207, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 5

Gene ERCC6, Length 418 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-207ENST00000479652 AEBP2Q6ZN18 517 aaPredicted RBP26.92■■□□□ 1.9
ERCC6-207ENST00000479652 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
ERCC6-207ENST00000479652 SENP3Q9H4L4 574 aaPredicted RBP22.97■■□□□ 1.27
ERCC6-207ENST00000479652 PHF23Q9BUL5 403 aaPredicted RBP22.68■■□□□ 1.22
ERCC6-207ENST00000479652 FOXD1Q16676 465 aa21.51■■□□□ 1.03
ERCC6-207ENST00000479652 POTEDQ86YR6 584 aa20.5■□□□□ 0.87
ERCC6-207ENST00000479652 MSH5O43196 834 aa20.23■□□□□ 0.83
ERCC6-207ENST00000479652 PIAS4Q8N2W9 510 aaPredicted RBP20.02■□□□□ 0.8
ERCC6-207ENST00000479652 PLPPR3Q6T4P5 718 aa19.89■□□□□ 0.77
ERCC6-207ENST00000479652 PPP6R1Q9UPN7 881 aa19.83■□□□□ 0.77
ERCC6-207ENST00000479652 ADRA2BP18089 450 aa19.77■□□□□ 0.76
ERCC6-207ENST00000479652 MAPK8IP2Q13387 824 aaPredicted RBP18.3■□□□□ 0.52
ERCC6-207ENST00000479652 DMRT2Q9Y5R5 561 aa18.15■□□□□ 0.5
ERCC6-207ENST00000479652 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
ERCC6-207ENST00000479652 CACNB1Q02641 598 aaPredicted RBP17.71■□□□□ 0.43
ERCC6-207ENST00000479652 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
ERCC6-207ENST00000479652 PPP4R3CPQ6ZMV5 832 aa17.42■□□□□ 0.38
ERCC6-207ENST00000479652 HOXD11P31277 338 aaPredicted RBP17.3■□□□□ 0.36
ERCC6-207ENST00000479652 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
ERCC6-207ENST00000479652 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
ERCC6-207ENST00000479652 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
ERCC6-207ENST00000479652 C1QBPQ07021 282 aaKnown RBP16.95■□□□□ 0.3
ERCC6-207ENST00000479652 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
ERCC6-207ENST00000479652 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
ERCC6-207ENST00000479652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.59■□□□□ 0.25
ERCC6-207ENST00000479652 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
ERCC6-207ENST00000479652 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
ERCC6-207ENST00000479652 CAPN15O75808 1086 aa16.1■□□□□ 0.17
ERCC6-207ENST00000479652 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
ERCC6-207ENST00000479652 DSG3P32926 999 aa16.03■□□□□ 0.16
ERCC6-207ENST00000479652 POTEHQ6S545 545 aa16■□□□□ 0.15
ERCC6-207ENST00000479652 TRHP20396 242 aaPredicted RBP15.77■□□□□ 0.12
ERCC6-207ENST00000479652 SLC4A2P04920 1241 aa15.74■□□□□ 0.11
ERCC6-207ENST00000479652 KCNA4P22459 653 aa15.73■□□□□ 0.11
ERCC6-207ENST00000479652 ABCB7O75027 752 aa15.71■□□□□ 0.11
ERCC6-207ENST00000479652 ZNF219Q9P2Y4 722 aaPredicted RBP15.61■□□□□ 0.09
ERCC6-207ENST00000479652 APLP2Q06481 763 aa15.6■□□□□ 0.09
ERCC6-207ENST00000479652 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
ERCC6-207ENST00000479652 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
ERCC6-207ENST00000479652 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
ERCC6-207ENST00000479652 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
ERCC6-207ENST00000479652 POLA2Q14181 598 aa15.2■□□□□ 0.02
ERCC6-207ENST00000479652 CHRDL2Q6WN34 429 aa15.14■□□□□ 0.01
ERCC6-207ENST00000479652 MYCNP04198 464 aaPredicted RBP15.13■□□□□ 0.01
ERCC6-207ENST00000479652 ATF5Q9Y2D1 282 aaPredicted RBP14.88□□□□□ -0.03
ERCC6-207ENST00000479652 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
ERCC6-207ENST00000479652 SP7Q8TDD2 431 aaPredicted RBP14.78□□□□□ -0.04
ERCC6-207ENST00000479652 ZBTB12Q9Y330 459 aaPredicted RBP14.77□□□□□ -0.05
ERCC6-207ENST00000479652 SLC4A1APQ9BWU0 796 aaKnown RBP14.76□□□□□ -0.05
ERCC6-207ENST00000479652 FOXD4L1Q9NU39 408 aa14.76□□□□□ -0.05
ERCC6-207ENST00000479652 REM2Q8IYK8 340 aaPredicted RBP14.75□□□□□ -0.05
ERCC6-207ENST00000479652 OSCARQ8IYS5 282 aa14.72□□□□□ -0.05
ERCC6-207ENST00000479652 PIP4P2Q8N4L2 257 aa14.71□□□□□ -0.05
ERCC6-207ENST00000479652 HAX1O00165 279 aa14.61□□□□□ -0.07
ERCC6-207ENST00000479652 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
ERCC6-207ENST00000479652 FXR2P51116 673 aaKnown RBP eCLIP14.51□□□□□ -0.09
ERCC6-207ENST00000479652 ZBTB22O15209 634 aa14.43□□□□□ -0.1
ERCC6-207ENST00000479652 EVX2Q03828 476 aa14.38□□□□□ -0.11
ERCC6-207ENST00000479652 SPDYE2BA6NHP3 402 aa14.3□□□□□ -0.12
ERCC6-207ENST00000479652 SPDYE6P0CI01 402 aa14.3□□□□□ -0.12
ERCC6-207ENST00000479652 FBLN2P98095 1184 aa14.3□□□□□ -0.12
ERCC6-207ENST00000479652 SPDYE2Q495Y8 402 aa14.3□□□□□ -0.12
ERCC6-207ENST00000479652 ATXN8OSP0DMR3 200 aa14.29□□□□□ -0.12
ERCC6-207ENST00000479652 CLEC11AQ9Y240 323 aa14.28□□□□□ -0.12
ERCC6-207ENST00000479652 PRKAR2AP13861 404 aaKnown RBP14.24□□□□□ -0.13
ERCC6-207ENST00000479652 SPDYE1Q8NFV5 336 aaPredicted RBP14.18□□□□□ -0.14
ERCC6-207ENST00000479652 MKRN4PQ13434 485 aaPredicted RBP14.14□□□□□ -0.15
ERCC6-207ENST00000479652 ZNF692Q9BU19 519 aaPredicted RBP14.14□□□□□ -0.15
ERCC6-207ENST00000479652 C19orf67A6NJJ6 358 aa14.07□□□□□ -0.16
ERCC6-207ENST00000479652 SSUH2Q9Y2M2 353 aa14.05□□□□□ -0.16
ERCC6-207ENST00000479652 CHADLQ6NUI6 762 aa14.04□□□□□ -0.16
ERCC6-207ENST00000479652 GABBR2O75899 941 aa14.01□□□□□ -0.17
ERCC6-207ENST00000479652 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
ERCC6-207ENST00000479652 PABPN1Q86U42 306 aaKnown RBP eCLIP13.91□□□□□ -0.18
ERCC6-207ENST00000479652 LHX8Q68G74 356 aa13.89□□□□□ -0.19
ERCC6-207ENST00000479652 CD44P16070 742 aaKnown RBP13.75□□□□□ -0.21
ERCC6-207ENST00000479652 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
ERCC6-207ENST00000479652 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
ERCC6-207ENST00000479652 DCBLD2Q96PD2 775 aa13.57□□□□□ -0.24
ERCC6-207ENST00000479652 CLCN6P51797 869 aa13.53□□□□□ -0.24
ERCC6-207ENST00000479652 ZRANB1Q9UGI0 708 aa13.52□□□□□ -0.25
ERCC6-207ENST00000479652 ZNF579Q8NAF0 562 aaKnown RBP13.46□□□□□ -0.25
ERCC6-207ENST00000479652 CREBZFQ9NS37 354 aa13.46□□□□□ -0.25
ERCC6-207ENST00000479652 PLSCR2Q9NRY7 297 aa13.42□□□□□ -0.26
ERCC6-207ENST00000479652 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
ERCC6-207ENST00000479652 GALR2O43603 387 aaPredicted RBP13.4□□□□□ -0.26
ERCC6-207ENST00000479652 STAG3Q9UJ98 1225 aa13.39□□□□□ -0.27
ERCC6-207ENST00000479652 PHF12Q96QT6 1004 aa13.3□□□□□ -0.28
ERCC6-207ENST00000479652 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
ERCC6-207ENST00000479652 SPDYE4A6NLX3 237 aa13.28□□□□□ -0.28
ERCC6-207ENST00000479652 OTUD5Q96G74 571 aa13.27□□□□□ -0.29
ERCC6-207ENST00000479652 POTEB2H3BUK9 544 aa13.26□□□□□ -0.29
ERCC6-207ENST00000479652 NPM1P06748 294 aaKnown RBP eCLIP13.19□□□□□ -0.3
ERCC6-207ENST00000479652 PELP1Q8IZL8 1130 aaKnown RBP13.18□□□□□ -0.3
ERCC6-207ENST00000479652 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
ERCC6-207ENST00000479652 POTEMA6NI47 508 aa13.11□□□□□ -0.31
ERCC6-207ENST00000479652 EHMT2Q96KQ7 1210 aa13.1□□□□□ -0.31
ERCC6-207ENST00000479652 MS4A3Q96HJ5 214 aa13.09□□□□□ -0.31
ERCC6-207ENST00000479652 POTEGQ6S5H5 508 aa13.06□□□□□ -0.32
ERCC6-207ENST00000479652 METRNQ9UJH8 293 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms