RNA–Protein interactions for RNA: ENST00000479635.1

VSIG1-204, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

TSL 3

Gene VSIG1, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-204ENST00000479635 AEBP2Q6ZN18 517 aaPredicted RBP23.54■■□□□ 1.36
VSIG1-204ENST00000479635 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
VSIG1-204ENST00000479635 SENP3Q9H4L4 574 aaPredicted RBP20.14■□□□□ 0.81
VSIG1-204ENST00000479635 PHF23Q9BUL5 403 aaPredicted RBP19.85■□□□□ 0.77
VSIG1-204ENST00000479635 FOXD1Q16676 465 aa18.82■□□□□ 0.6
VSIG1-204ENST00000479635 POTEDQ86YR6 584 aa17.92■□□□□ 0.46
VSIG1-204ENST00000479635 MSH5O43196 834 aa17.74■□□□□ 0.43
VSIG1-204ENST00000479635 PIAS4Q8N2W9 510 aaPredicted RBP17.54■□□□□ 0.4
VSIG1-204ENST00000479635 PLPPR3Q6T4P5 718 aa17.45■□□□□ 0.38
VSIG1-204ENST00000479635 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
VSIG1-204ENST00000479635 ADRA2BP18089 450 aa17.29■□□□□ 0.36
VSIG1-204ENST00000479635 MAPK8IP2Q13387 824 aaPredicted RBP15.99■□□□□ 0.15
VSIG1-204ENST00000479635 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
VSIG1-204ENST00000479635 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
VSIG1-204ENST00000479635 CACNB1Q02641 598 aaPredicted RBP15.5■□□□□ 0.07
VSIG1-204ENST00000479635 DCAF8L1A6NGE4 600 aa15.39■□□□□ 0.05
VSIG1-204ENST00000479635 PPP4R3CPQ6ZMV5 832 aa15.26■□□□□ 0.03
VSIG1-204ENST00000479635 HOXD11P31277 338 aaPredicted RBP15.16■□□□□ 0.02
VSIG1-204ENST00000479635 RNF39Q9H2S5 420 aa15.09■□□□□ 0.01
VSIG1-204ENST00000479635 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
VSIG1-204ENST00000479635 RNF216Q9NWF9 866 aaPredicted RBP14.97□□□□□ -0.01
VSIG1-204ENST00000479635 C1QBPQ07021 282 aaKnown RBP14.85□□□□□ -0.03
VSIG1-204ENST00000479635 DNAJC5BQ9UF47 199 aa14.65□□□□□ -0.06
VSIG1-204ENST00000479635 NCBP3Q53F19 620 aaKnown RBP14.57□□□□□ -0.08
VSIG1-204ENST00000479635 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.08
VSIG1-204ENST00000479635 NPM3O75607 178 aaKnown RBP14.35□□□□□ -0.11
VSIG1-204ENST00000479635 U3KPZ7 1027 aaPredicted RBP14.13□□□□□ -0.15
VSIG1-204ENST00000479635 CAPN15O75808 1086 aa14.09□□□□□ -0.15
VSIG1-204ENST00000479635 SPINK5Q9NQ38 1064 aaPredicted RBP14.07□□□□□ -0.16
VSIG1-204ENST00000479635 DSG3P32926 999 aa14.03□□□□□ -0.16
VSIG1-204ENST00000479635 POTEHQ6S545 545 aa13.99□□□□□ -0.17
VSIG1-204ENST00000479635 TRHP20396 242 aaPredicted RBP13.8□□□□□ -0.2
VSIG1-204ENST00000479635 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
VSIG1-204ENST00000479635 KCNA4P22459 653 aa13.78□□□□□ -0.2
VSIG1-204ENST00000479635 ABCB7O75027 752 aa13.75□□□□□ -0.21
VSIG1-204ENST00000479635 APLP2Q06481 763 aa13.72□□□□□ -0.21
VSIG1-204ENST00000479635 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
VSIG1-204ENST00000479635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.62□□□□□ -0.23
VSIG1-204ENST00000479635 HNRNPUL2Q1KMD3 747 aaKnown RBP13.62□□□□□ -0.23
VSIG1-204ENST00000479635 SAMD1Q6SPF0 538 aaPredicted RBP13.53□□□□□ -0.24
VSIG1-204ENST00000479635 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
VSIG1-204ENST00000479635 POLA2Q14181 598 aa13.31□□□□□ -0.28
VSIG1-204ENST00000479635 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
VSIG1-204ENST00000479635 CHRDL2Q6WN34 429 aa13.26□□□□□ -0.29
VSIG1-204ENST00000479635 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
VSIG1-204ENST00000479635 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
VSIG1-204ENST00000479635 ZBTB12Q9Y330 459 aaPredicted RBP12.98□□□□□ -0.33
VSIG1-204ENST00000479635 SLC4A1APQ9BWU0 796 aaKnown RBP12.96□□□□□ -0.33
VSIG1-204ENST00000479635 FOXD4L1Q9NU39 408 aa12.96□□□□□ -0.33
VSIG1-204ENST00000479635 SP7Q8TDD2 431 aaPredicted RBP12.94□□□□□ -0.34
VSIG1-204ENST00000479635 REM2Q8IYK8 340 aaPredicted RBP12.91□□□□□ -0.34
VSIG1-204ENST00000479635 OSCARQ8IYS5 282 aa12.91□□□□□ -0.34
VSIG1-204ENST00000479635 PIP4P2Q8N4L2 257 aa12.87□□□□□ -0.35
VSIG1-204ENST00000479635 HAX1O00165 279 aa12.78□□□□□ -0.36
VSIG1-204ENST00000479635 PITPNM1O00562 1244 aa12.78□□□□□ -0.36
VSIG1-204ENST00000479635 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.38
VSIG1-204ENST00000479635 ZBTB22O15209 634 aa12.65□□□□□ -0.38
VSIG1-204ENST00000479635 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
VSIG1-204ENST00000479635 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
VSIG1-204ENST00000479635 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
VSIG1-204ENST00000479635 FBLN2P98095 1184 aa12.55□□□□□ -0.4
VSIG1-204ENST00000479635 EVX2Q03828 476 aa12.55□□□□□ -0.4
VSIG1-204ENST00000479635 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
VSIG1-204ENST00000479635 CLEC11AQ9Y240 323 aa12.5□□□□□ -0.41
VSIG1-204ENST00000479635 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
VSIG1-204ENST00000479635 SPDYE1Q8NFV5 336 aaPredicted RBP12.43□□□□□ -0.42
VSIG1-204ENST00000479635 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
VSIG1-204ENST00000479635 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
VSIG1-204ENST00000479635 SSUH2Q9Y2M2 353 aa12.32□□□□□ -0.44
VSIG1-204ENST00000479635 C19orf67A6NJJ6 358 aa12.31□□□□□ -0.44
VSIG1-204ENST00000479635 CHADLQ6NUI6 762 aa12.28□□□□□ -0.44
VSIG1-204ENST00000479635 GABBR2O75899 941 aa12.25□□□□□ -0.45
VSIG1-204ENST00000479635 PRR29P0C7W0 189 aa12.21□□□□□ -0.45
VSIG1-204ENST00000479635 PABPN1Q86U42 306 aaKnown RBP eCLIP12.19□□□□□ -0.46
VSIG1-204ENST00000479635 LHX8Q68G74 356 aa12.15□□□□□ -0.46
VSIG1-204ENST00000479635 CD44P16070 742 aaKnown RBP12.05□□□□□ -0.48
VSIG1-204ENST00000479635 FARP1Q9Y4F1 1045 aaPredicted RBP12.02□□□□□ -0.49
VSIG1-204ENST00000479635 POTEIP0CG38 1075 aa11.97□□□□□ -0.49
VSIG1-204ENST00000479635 DCBLD2Q96PD2 775 aa11.89□□□□□ -0.51
VSIG1-204ENST00000479635 CLCN6P51797 869 aa11.88□□□□□ -0.51
VSIG1-204ENST00000479635 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
VSIG1-204ENST00000479635 ZNF579Q8NAF0 562 aaKnown RBP11.8□□□□□ -0.52
VSIG1-204ENST00000479635 CREBZFQ9NS37 354 aa11.78□□□□□ -0.52
VSIG1-204ENST00000479635 STAG3Q9UJ98 1225 aa11.76□□□□□ -0.53
VSIG1-204ENST00000479635 CSRNP3Q8WYN3 585 aa11.75□□□□□ -0.53
VSIG1-204ENST00000479635 PLSCR2Q9NRY7 297 aa11.73□□□□□ -0.53
VSIG1-204ENST00000479635 GALR2O43603 387 aaPredicted RBP11.72□□□□□ -0.53
VSIG1-204ENST00000479635 PAK3O75914 559 aaPredicted RBP11.67□□□□□ -0.54
VSIG1-204ENST00000479635 SPDYE4A6NLX3 237 aa11.65□□□□□ -0.54
VSIG1-204ENST00000479635 PHF12Q96QT6 1004 aa11.64□□□□□ -0.55
VSIG1-204ENST00000479635 OTUD5Q96G74 571 aa11.6□□□□□ -0.55
VSIG1-204ENST00000479635 POTEB2H3BUK9 544 aa11.58□□□□□ -0.56
VSIG1-204ENST00000479635 NPM1P06748 294 aaKnown RBP eCLIP11.58□□□□□ -0.56
VSIG1-204ENST00000479635 PELP1Q8IZL8 1130 aaKnown RBP11.51□□□□□ -0.57
VSIG1-204ENST00000479635 MNX1P50219 401 aaPredicted RBP11.5□□□□□ -0.57
VSIG1-204ENST00000479635 EHMT2Q96KQ7 1210 aa11.5□□□□□ -0.57
VSIG1-204ENST00000479635 POTEMA6NI47 508 aa11.47□□□□□ -0.57
VSIG1-204ENST00000479635 MS4A3Q96HJ5 214 aa11.46□□□□□ -0.57
VSIG1-204ENST00000479635 METRNQ9UJH8 293 aa11.44□□□□□ -0.58
VSIG1-204ENST00000479635 POTEGQ6S5H5 508 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms