RNA–Protein interactions for RNA: ENST00000479541.1

RNF216-208, Transcript of ring finger protein 216, humanhuman

TSL 4

Gene RNF216, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216-208ENST00000479541 AEBP2Q6ZN18 517 aaPredicted RBP23.77■■□□□ 1.4
RNF216-208ENST00000479541 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
RNF216-208ENST00000479541 SENP3Q9H4L4 574 aaPredicted RBP20.22■□□□□ 0.83
RNF216-208ENST00000479541 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
RNF216-208ENST00000479541 FOXD1Q16676 465 aa18.8■□□□□ 0.6
RNF216-208ENST00000479541 PLPPR3Q6T4P5 718 aa18.56■□□□□ 0.56
RNF216-208ENST00000479541 PPP6R1Q9UPN7 881 aa17.92■□□□□ 0.46
RNF216-208ENST00000479541 ADRA2BP18089 450 aa17.91■□□□□ 0.46
RNF216-208ENST00000479541 PIAS4Q8N2W9 510 aaPredicted RBP17.7■□□□□ 0.42
RNF216-208ENST00000479541 MSH5O43196 834 aa17.43■□□□□ 0.38
RNF216-208ENST00000479541 POTEDQ86YR6 584 aa16.76■□□□□ 0.27
RNF216-208ENST00000479541 SCAF1Q9H7N4 1312 aaKnown RBP16.39■□□□□ 0.21
RNF216-208ENST00000479541 PPP4R3CPQ6ZMV5 832 aa16.34■□□□□ 0.21
RNF216-208ENST00000479541 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
RNF216-208ENST00000479541 DMRT2Q9Y5R5 561 aa16.09■□□□□ 0.17
RNF216-208ENST00000479541 CNKSR2Q8WXI2 1034 aa15.92■□□□□ 0.14
RNF216-208ENST00000479541 NCBP3Q53F19 620 aaKnown RBP15.86■□□□□ 0.13
RNF216-208ENST00000479541 KCNA4P22459 653 aa15.68■□□□□ 0.1
RNF216-208ENST00000479541 RNF216Q9NWF9 866 aaPredicted RBP15.65■□□□□ 0.1
RNF216-208ENST00000479541 HOXD11P31277 338 aaPredicted RBP15.64■□□□□ 0.09
RNF216-208ENST00000479541 NPM3O75607 178 aaKnown RBP15.59■□□□□ 0.09
RNF216-208ENST00000479541 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
RNF216-208ENST00000479541 DNAJC5BQ9UF47 199 aa15.07■□□□□ 0
RNF216-208ENST00000479541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.01
RNF216-208ENST00000479541 SLC4A1APQ9BWU0 796 aaKnown RBP14.9□□□□□ -0.02
RNF216-208ENST00000479541 RNF39Q9H2S5 420 aa14.9□□□□□ -0.02
RNF216-208ENST00000479541 SLC4A2P04920 1241 aa14.77□□□□□ -0.05
RNF216-208ENST00000479541 CACNB1Q02641 598 aaPredicted RBP14.77□□□□□ -0.05
RNF216-208ENST00000479541 C1QBPQ07021 282 aaKnown RBP14.72□□□□□ -0.05
RNF216-208ENST00000479541 U3KPZ7 1027 aaPredicted RBP14.66□□□□□ -0.06
RNF216-208ENST00000479541 FOXD4L1Q9NU39 408 aa14.48□□□□□ -0.09
RNF216-208ENST00000479541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.4□□□□□ -0.1
RNF216-208ENST00000479541 MYCNP04198 464 aaPredicted RBP14.4□□□□□ -0.1
RNF216-208ENST00000479541 HNRNPUL2Q1KMD3 747 aaKnown RBP14.4□□□□□ -0.1
RNF216-208ENST00000479541 ZBTB22O15209 634 aa14.39□□□□□ -0.11
RNF216-208ENST00000479541 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
RNF216-208ENST00000479541 CAPN15O75808 1086 aa14.35□□□□□ -0.11
RNF216-208ENST00000479541 SAMD1Q6SPF0 538 aaPredicted RBP14.35□□□□□ -0.11
RNF216-208ENST00000479541 APLP2Q06481 763 aa14.32□□□□□ -0.12
RNF216-208ENST00000479541 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
RNF216-208ENST00000479541 EHMT2Q96KQ7 1210 aa14.22□□□□□ -0.13
RNF216-208ENST00000479541 ZNF219Q9P2Y4 722 aaPredicted RBP14.15□□□□□ -0.14
RNF216-208ENST00000479541 CSRNP3Q8WYN3 585 aa14.12□□□□□ -0.15
RNF216-208ENST00000479541 DSG3P32926 999 aa14.1□□□□□ -0.15
RNF216-208ENST00000479541 ATF5Q9Y2D1 282 aaPredicted RBP14.06□□□□□ -0.16
RNF216-208ENST00000479541 ABCB7O75027 752 aa14.05□□□□□ -0.16
RNF216-208ENST00000479541 ATXN8OSP0DMR3 200 aa13.98□□□□□ -0.17
RNF216-208ENST00000479541 POLA2Q14181 598 aa13.92□□□□□ -0.18
RNF216-208ENST00000479541 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
RNF216-208ENST00000479541 FBLN2P98095 1184 aa13.51□□□□□ -0.25
RNF216-208ENST00000479541 RBM42Q9BTD8 480 aaKnown RBP13.45□□□□□ -0.26
RNF216-208ENST00000479541 OSCARQ8IYS5 282 aa13.43□□□□□ -0.26
RNF216-208ENST00000479541 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
RNF216-208ENST00000479541 SPDYE2BA6NHP3 402 aa13.24□□□□□ -0.29
RNF216-208ENST00000479541 SPDYE6P0CI01 402 aa13.24□□□□□ -0.29
RNF216-208ENST00000479541 SPDYE2Q495Y8 402 aa13.24□□□□□ -0.29
RNF216-208ENST00000479541 AKT1S1Q96B36 256 aa13.24□□□□□ -0.29
RNF216-208ENST00000479541 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
RNF216-208ENST00000479541 POTEHQ6S545 545 aa13.13□□□□□ -0.31
RNF216-208ENST00000479541 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
RNF216-208ENST00000479541 SSUH2Q9Y2M2 353 aa13.08□□□□□ -0.32
RNF216-208ENST00000479541 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
RNF216-208ENST00000479541 CHRDL2Q6WN34 429 aa13.01□□□□□ -0.33
RNF216-208ENST00000479541 PABPN1Q86U42 306 aaKnown RBP eCLIP13.01□□□□□ -0.33
RNF216-208ENST00000479541 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
RNF216-208ENST00000479541 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
RNF216-208ENST00000479541 SPDYE1Q8NFV5 336 aaPredicted RBP12.93□□□□□ -0.34
RNF216-208ENST00000479541 FKBP8Q14318 412 aa12.82□□□□□ -0.36
RNF216-208ENST00000479541 PIP4P2Q8N4L2 257 aa12.79□□□□□ -0.36
RNF216-208ENST00000479541 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
RNF216-208ENST00000479541 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
RNF216-208ENST00000479541 STAG3Q9UJ98 1225 aa12.73□□□□□ -0.37
RNF216-208ENST00000479541 PROM2Q8N271 834 aa12.69□□□□□ -0.38
RNF216-208ENST00000479541 PRKAR2AP13861 404 aaKnown RBP12.66□□□□□ -0.38
RNF216-208ENST00000479541 CHADLQ6NUI6 762 aa12.63□□□□□ -0.39
RNF216-208ENST00000479541 HAX1O00165 279 aa12.5□□□□□ -0.41
RNF216-208ENST00000479541 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
RNF216-208ENST00000479541 FARP1Q9Y4F1 1045 aaPredicted RBP12.46□□□□□ -0.41
RNF216-208ENST00000479541 MIER1Q8N108 512 aa12.44□□□□□ -0.42
RNF216-208ENST00000479541 FBXO3Q9UK99 471 aa12.42□□□□□ -0.42
RNF216-208ENST00000479541 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
RNF216-208ENST00000479541 PLCD3Q8N3E9 789 aa12.38□□□□□ -0.43
RNF216-208ENST00000479541 C19orf67A6NJJ6 358 aa12.33□□□□□ -0.44
RNF216-208ENST00000479541 EVX2Q03828 476 aa12.33□□□□□ -0.44
RNF216-208ENST00000479541 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
RNF216-208ENST00000479541 MNX1P50219 401 aaPredicted RBP12.31□□□□□ -0.44
RNF216-208ENST00000479541 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
RNF216-208ENST00000479541 SP7Q8TDD2 431 aaPredicted RBP12.27□□□□□ -0.45
RNF216-208ENST00000479541 VASPP50552 380 aaPredicted RBP12.24□□□□□ -0.45
RNF216-208ENST00000479541 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
RNF216-208ENST00000479541 ZRANB1Q9UGI0 708 aa12.2□□□□□ -0.46
RNF216-208ENST00000479541 PAK3O75914 559 aaPredicted RBP12.19□□□□□ -0.46
RNF216-208ENST00000479541 KLHL34Q8N239 644 aa12.17□□□□□ -0.46
RNF216-208ENST00000479541 TSPYL2Q9H2G4 693 aaPredicted RBP12.14□□□□□ -0.47
RNF216-208ENST00000479541 RASEFQ8IZ41 740 aa12.09□□□□□ -0.47
RNF216-208ENST00000479541 GABBR2O75899 941 aa12.08□□□□□ -0.48
RNF216-208ENST00000479541 NUBP1P53384 320 aa12.07□□□□□ -0.48
RNF216-208ENST00000479541 ZNF579Q8NAF0 562 aaKnown RBP12.07□□□□□ -0.48
RNF216-208ENST00000479541 IFNLR1Q8IU57 520 aaPredicted RBP12.06□□□□□ -0.48
RNF216-208ENST00000479541 PHF12Q96QT6 1004 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms