RNA–Protein interactions for RNA: ENST00000479325.1

RUNX1-215, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-215ENST00000479325 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
RUNX1-215ENST00000479325 CHIC1Q5VXU3 224 aa24.82■■□□□ 1.56
RUNX1-215ENST00000479325 SENP3Q9H4L4 574 aaPredicted RBP22.81■■□□□ 1.24
RUNX1-215ENST00000479325 PHF23Q9BUL5 403 aaPredicted RBP22.35■■□□□ 1.17
RUNX1-215ENST00000479325 POTEDQ86YR6 584 aa21.48■■□□□ 1.03
RUNX1-215ENST00000479325 FOXD1Q16676 465 aa21.29■■□□□ 1
RUNX1-215ENST00000479325 MSH5O43196 834 aa20.41■□□□□ 0.86
RUNX1-215ENST00000479325 PIAS4Q8N2W9 510 aaPredicted RBP19.72■□□□□ 0.75
RUNX1-215ENST00000479325 PPP6R1Q9UPN7 881 aa19.13■□□□□ 0.65
RUNX1-215ENST00000479325 ADRA2BP18089 450 aa19.05■□□□□ 0.64
RUNX1-215ENST00000479325 PLPPR3Q6T4P5 718 aa18.97■□□□□ 0.63
RUNX1-215ENST00000479325 CACNB1Q02641 598 aaPredicted RBP18.13■□□□□ 0.49
RUNX1-215ENST00000479325 DMRT2Q9Y5R5 561 aa17.88■□□□□ 0.45
RUNX1-215ENST00000479325 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
RUNX1-215ENST00000479325 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
RUNX1-215ENST00000479325 DCAF8L1A6NGE4 600 aa17.32■□□□□ 0.36
RUNX1-215ENST00000479325 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
RUNX1-215ENST00000479325 C1QBPQ07021 282 aaKnown RBP17.01■□□□□ 0.31
RUNX1-215ENST00000479325 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
RUNX1-215ENST00000479325 POTEHQ6S545 545 aa16.68■□□□□ 0.26
RUNX1-215ENST00000479325 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
RUNX1-215ENST00000479325 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
RUNX1-215ENST00000479325 PPP4R3CPQ6ZMV5 832 aa16.47■□□□□ 0.23
RUNX1-215ENST00000479325 CNKSR2Q8WXI2 1034 aa16.41■□□□□ 0.22
RUNX1-215ENST00000479325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.18
RUNX1-215ENST00000479325 DSG3P32926 999 aa15.82■□□□□ 0.12
RUNX1-215ENST00000479325 CAPN15O75808 1086 aa15.78■□□□□ 0.12
RUNX1-215ENST00000479325 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
RUNX1-215ENST00000479325 SPINK5Q9NQ38 1064 aaPredicted RBP15.65■□□□□ 0.1
RUNX1-215ENST00000479325 U3KPZ7 1027 aaPredicted RBP15.57■□□□□ 0.08
RUNX1-215ENST00000479325 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
RUNX1-215ENST00000479325 NPM3O75607 178 aaKnown RBP15.27■□□□□ 0.04
RUNX1-215ENST00000479325 ABCB7O75027 752 aa15.26■□□□□ 0.03
RUNX1-215ENST00000479325 APLP2Q06481 763 aa15.24■□□□□ 0.03
RUNX1-215ENST00000479325 RBM42Q9BTD8 480 aaKnown RBP15.23■□□□□ 0.03
RUNX1-215ENST00000479325 CHRDL2Q6WN34 429 aa15.22■□□□□ 0.03
RUNX1-215ENST00000479325 ZNF219Q9P2Y4 722 aaPredicted RBP15.22■□□□□ 0.03
RUNX1-215ENST00000479325 SP7Q8TDD2 431 aaPredicted RBP15.18■□□□□ 0.02
RUNX1-215ENST00000479325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.96□□□□□ -0.01
RUNX1-215ENST00000479325 HNRNPUL2Q1KMD3 747 aaKnown RBP14.96□□□□□ -0.01
RUNX1-215ENST00000479325 SLC4A2P04920 1241 aa14.8□□□□□ -0.04
RUNX1-215ENST00000479325 SAMD1Q6SPF0 538 aaPredicted RBP14.79□□□□□ -0.04
RUNX1-215ENST00000479325 HAX1O00165 279 aa14.71□□□□□ -0.05
RUNX1-215ENST00000479325 AKT1S1Q96B36 256 aa14.64□□□□□ -0.07
RUNX1-215ENST00000479325 POLA2Q14181 598 aa14.63□□□□□ -0.07
RUNX1-215ENST00000479325 PIP4P2Q8N4L2 257 aa14.62□□□□□ -0.07
RUNX1-215ENST00000479325 REM2Q8IYK8 340 aaPredicted RBP14.47□□□□□ -0.09
RUNX1-215ENST00000479325 FXR2P51116 673 aaKnown RBP eCLIP14.38□□□□□ -0.11
RUNX1-215ENST00000479325 ZBTB12Q9Y330 459 aaPredicted RBP14.31□□□□□ -0.12
RUNX1-215ENST00000479325 PITPNM1O00562 1244 aa14.3□□□□□ -0.12
RUNX1-215ENST00000479325 EVX2Q03828 476 aa14.3□□□□□ -0.12
RUNX1-215ENST00000479325 LHX8Q68G74 356 aa14.26□□□□□ -0.13
RUNX1-215ENST00000479325 MYCNP04198 464 aaPredicted RBP14.21□□□□□ -0.13
RUNX1-215ENST00000479325 PLSCR2Q9NRY7 297 aa14.21□□□□□ -0.13
RUNX1-215ENST00000479325 OSCARQ8IYS5 282 aa14.14□□□□□ -0.15
RUNX1-215ENST00000479325 KCNA4P22459 653 aa14.13□□□□□ -0.15
RUNX1-215ENST00000479325 GABBR2O75899 941 aa14.02□□□□□ -0.17
RUNX1-215ENST00000479325 PRKAR2AP13861 404 aaKnown RBP13.97□□□□□ -0.17
RUNX1-215ENST00000479325 C19orf67A6NJJ6 358 aa13.96□□□□□ -0.17
RUNX1-215ENST00000479325 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
RUNX1-215ENST00000479325 CLEC11AQ9Y240 323 aa13.82□□□□□ -0.2
RUNX1-215ENST00000479325 SPDYE1Q8NFV5 336 aaPredicted RBP13.77□□□□□ -0.21
RUNX1-215ENST00000479325 SPDYE2BA6NHP3 402 aa13.75□□□□□ -0.21
RUNX1-215ENST00000479325 SPDYE6P0CI01 402 aa13.75□□□□□ -0.21
RUNX1-215ENST00000479325 SPDYE2Q495Y8 402 aa13.75□□□□□ -0.21
RUNX1-215ENST00000479325 POTEIP0CG38 1075 aa13.62□□□□□ -0.23
RUNX1-215ENST00000479325 CLCN6P51797 869 aa13.57□□□□□ -0.24
RUNX1-215ENST00000479325 CHADLQ6NUI6 762 aa13.57□□□□□ -0.24
RUNX1-215ENST00000479325 NISCHQ9Y2I1 1504 aa13.57□□□□□ -0.24
RUNX1-215ENST00000479325 FBLN2P98095 1184 aa13.56□□□□□ -0.24
RUNX1-215ENST00000479325 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
RUNX1-215ENST00000479325 DCBLD2Q96PD2 775 aa13.52□□□□□ -0.25
RUNX1-215ENST00000479325 CD44P16070 742 aaKnown RBP13.47□□□□□ -0.25
RUNX1-215ENST00000479325 POTEMA6NI47 508 aa13.46□□□□□ -0.25
RUNX1-215ENST00000479325 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
RUNX1-215ENST00000479325 ZNF692Q9BU19 519 aaPredicted RBP13.46□□□□□ -0.25
RUNX1-215ENST00000479325 POTEGQ6S5H5 508 aa13.39□□□□□ -0.27
RUNX1-215ENST00000479325 PCDH10Q9P2E7 1040 aa13.38□□□□□ -0.27
RUNX1-215ENST00000479325 SSUH2Q9Y2M2 353 aa13.38□□□□□ -0.27
RUNX1-215ENST00000479325 OTUD5Q96G74 571 aa13.35□□□□□ -0.27
RUNX1-215ENST00000479325 FARP1Q9Y4F1 1045 aaPredicted RBP13.3□□□□□ -0.28
RUNX1-215ENST00000479325 ATXN8OSP0DMR3 200 aa13.23□□□□□ -0.29
RUNX1-215ENST00000479325 SLC4A1APQ9BWU0 796 aaKnown RBP13.2□□□□□ -0.3
RUNX1-215ENST00000479325 PABPN1Q86U42 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
RUNX1-215ENST00000479325 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
RUNX1-215ENST00000479325 MKRN4PQ13434 485 aaPredicted RBP13.16□□□□□ -0.3
RUNX1-215ENST00000479325 ZRANB1Q9UGI0 708 aa13.16□□□□□ -0.3
RUNX1-215ENST00000479325 POTEB2H3BUK9 544 aa13.15□□□□□ -0.3
RUNX1-215ENST00000479325 GALR2O43603 387 aaPredicted RBP13.07□□□□□ -0.32
RUNX1-215ENST00000479325 ZBTB22O15209 634 aa13□□□□□ -0.33
RUNX1-215ENST00000479325 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
RUNX1-215ENST00000479325 FAM163AQ96GL9 167 aaPredicted RBP12.96□□□□□ -0.33
RUNX1-215ENST00000479325 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
RUNX1-215ENST00000479325 PELP1Q8IZL8 1130 aaKnown RBP12.88□□□□□ -0.35
RUNX1-215ENST00000479325 METRNQ9UJH8 293 aa12.86□□□□□ -0.35
RUNX1-215ENST00000479325 C7P10643 843 aa12.84□□□□□ -0.35
RUNX1-215ENST00000479325 SLC39A7Q92504 469 aa12.84□□□□□ -0.35
RUNX1-215ENST00000479325 LCE2DQ5TA82 110 aaPredicted RBP12.82□□□□□ -0.36
RUNX1-215ENST00000479325 SCUBE2Q9NQ36 999 aa12.82□□□□□ -0.36
RUNX1-215ENST00000479325 PHF12Q96QT6 1004 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms