RNA–Protein interactions for RNA: ENST00000479230.5

GNL3-208, Transcript of G protein nucleolar 3, humanhuman

TSL 4

Gene GNL3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNL3-208ENST00000479230 AEBP2Q6ZN18 517 aaPredicted RBP31.87■■■□□ 2.69
GNL3-208ENST00000479230 CHIC1Q5VXU3 224 aa30.76■■■□□ 2.51
GNL3-208ENST00000479230 PHF23Q9BUL5 403 aaPredicted RBP27.08■■□□□ 1.93
GNL3-208ENST00000479230 SENP3Q9H4L4 574 aaPredicted RBP26.99■■□□□ 1.91
GNL3-208ENST00000479230 FOXD1Q16676 465 aa25.16■■□□□ 1.62
GNL3-208ENST00000479230 PLPPR3Q6T4P5 718 aa24.8■■□□□ 1.56
GNL3-208ENST00000479230 PPP6R1Q9UPN7 881 aa24■■□□□ 1.43
GNL3-208ENST00000479230 ADRA2BP18089 450 aa23.95■■□□□ 1.42
GNL3-208ENST00000479230 PIAS4Q8N2W9 510 aaPredicted RBP23.63■■□□□ 1.37
GNL3-208ENST00000479230 MSH5O43196 834 aa23.23■■□□□ 1.31
GNL3-208ENST00000479230 PPP4R3CPQ6ZMV5 832 aa21.86■■□□□ 1.09
GNL3-208ENST00000479230 MAPK8IP2Q13387 824 aaPredicted RBP21.84■■□□□ 1.09
GNL3-208ENST00000479230 POTEDQ86YR6 584 aa21.78■■□□□ 1.08
GNL3-208ENST00000479230 SCAF1Q9H7N4 1312 aaKnown RBP21.78■■□□□ 1.08
GNL3-208ENST00000479230 DMRT2Q9Y5R5 561 aa21.52■■□□□ 1.04
GNL3-208ENST00000479230 CNKSR2Q8WXI2 1034 aa21.28■■□□□ 1
GNL3-208ENST00000479230 NCBP3Q53F19 620 aaKnown RBP21.12■□□□□ 0.97
GNL3-208ENST00000479230 KCNA4P22459 653 aa21.04■□□□□ 0.96
GNL3-208ENST00000479230 HOXD11P31277 338 aaPredicted RBP20.95■□□□□ 0.94
GNL3-208ENST00000479230 RNF216Q9NWF9 866 aaPredicted RBP20.94■□□□□ 0.94
GNL3-208ENST00000479230 NPM3O75607 178 aaKnown RBP20.9■□□□□ 0.94
GNL3-208ENST00000479230 DCAF8L1A6NGE4 600 aa20.63■□□□□ 0.89
GNL3-208ENST00000479230 DNAJC5BQ9UF47 199 aa20.26■□□□□ 0.83
GNL3-208ENST00000479230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.96■□□□□ 0.795e-15■■■□□ 19.2
GNL3-208ENST00000479230 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
GNL3-208ENST00000479230 RNF39Q9H2S5 420 aa19.93■□□□□ 0.78
GNL3-208ENST00000479230 SLC4A2P04920 1241 aa19.83■□□□□ 0.77
GNL3-208ENST00000479230 U3KPZ7 1027 aaPredicted RBP19.65■□□□□ 0.74
GNL3-208ENST00000479230 CACNB1Q02641 598 aaPredicted RBP19.62■□□□□ 0.73
GNL3-208ENST00000479230 C1QBPQ07021 282 aaKnown RBP19.62■□□□□ 0.73
GNL3-208ENST00000479230 ZBTB22O15209 634 aa19.4■□□□□ 0.7
GNL3-208ENST00000479230 FOXD4L1Q9NU39 408 aa19.4■□□□□ 0.7
GNL3-208ENST00000479230 MYCNP04198 464 aaPredicted RBP19.28■□□□□ 0.68
GNL3-208ENST00000479230 SPINK5Q9NQ38 1064 aaPredicted RBP19.22■□□□□ 0.67
GNL3-208ENST00000479230 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
GNL3-208ENST00000479230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.17■□□□□ 0.66
GNL3-208ENST00000479230 HNRNPUL2Q1KMD3 747 aaKnown RBP19.17■□□□□ 0.66
GNL3-208ENST00000479230 SAMD1Q6SPF0 538 aaPredicted RBP19.12■□□□□ 0.65
GNL3-208ENST00000479230 CAPN15O75808 1086 aa19.11■□□□□ 0.65
GNL3-208ENST00000479230 APLP2Q06481 763 aa19.03■□□□□ 0.64
GNL3-208ENST00000479230 CSRNP3Q8WYN3 585 aa18.99■□□□□ 0.63
GNL3-208ENST00000479230 TRHP20396 242 aaPredicted RBP18.95■□□□□ 0.62
GNL3-208ENST00000479230 ZNF219Q9P2Y4 722 aaPredicted RBP18.88■□□□□ 0.61
GNL3-208ENST00000479230 ATF5Q9Y2D1 282 aaPredicted RBP18.88■□□□□ 0.61
GNL3-208ENST00000479230 DSG3P32926 999 aa18.87■□□□□ 0.61
GNL3-208ENST00000479230 ABCB7O75027 752 aa18.76■□□□□ 0.59
GNL3-208ENST00000479230 ATXN8OSP0DMR3 200 aa18.7■□□□□ 0.58
GNL3-208ENST00000479230 POLA2Q14181 598 aa18.56■□□□□ 0.56
GNL3-208ENST00000479230 ZBTB12Q9Y330 459 aaPredicted RBP18.16■□□□□ 0.5
GNL3-208ENST00000479230 MKRN4PQ13434 485 aaPredicted RBP18.03■□□□□ 0.48
GNL3-208ENST00000479230 OSCARQ8IYS5 282 aa17.99■□□□□ 0.47
GNL3-208ENST00000479230 FBLN2P98095 1184 aa17.98■□□□□ 0.47
GNL3-208ENST00000479230 RBM42Q9BTD8 480 aaKnown RBP17.91■□□□□ 0.46
GNL3-208ENST00000479230 SPDYE2BA6NHP3 402 aa17.68■□□□□ 0.42
GNL3-208ENST00000479230 SPDYE6P0CI01 402 aa17.68■□□□□ 0.42
GNL3-208ENST00000479230 SPDYE2Q495Y8 402 aa17.68■□□□□ 0.42
GNL3-208ENST00000479230 AKT1S1Q96B36 256 aa17.65■□□□□ 0.42
GNL3-208ENST00000479230 ZNF692Q9BU19 519 aaPredicted RBP17.58■□□□□ 0.4
GNL3-208ENST00000479230 SSUH2Q9Y2M2 353 aa17.54■□□□□ 0.4
GNL3-208ENST00000479230 REM2Q8IYK8 340 aaPredicted RBP17.52■□□□□ 0.4
GNL3-208ENST00000479230 SPDYE4A6NLX3 237 aa17.41■□□□□ 0.38
GNL3-208ENST00000479230 PABPN1Q86U42 306 aaKnown RBP eCLIP17.36■□□□□ 0.37
GNL3-208ENST00000479230 PITPNM1O00562 1244 aa17.35■□□□□ 0.37
GNL3-208ENST00000479230 CHRDL2Q6WN34 429 aa17.35■□□□□ 0.37
GNL3-208ENST00000479230 SPDYE1Q8NFV5 336 aaPredicted RBP17.22■□□□□ 0.35
GNL3-208ENST00000479230 CLEC11AQ9Y240 323 aa17.21■□□□□ 0.35
GNL3-208ENST00000479230 FKBP8Q14318 412 aa17.17■□□□□ 0.34
GNL3-208ENST00000479230 POTEHQ6S545 545 aa17.16■□□□□ 0.34
GNL3-208ENST00000479230 PROM2Q8N271 834 aa17.1■□□□□ 0.33
GNL3-208ENST00000479230 PIP4P2Q8N4L2 257 aa17.09■□□□□ 0.33
GNL3-208ENST00000479230 FXR2P51116 673 aaKnown RBP eCLIP17.06■□□□□ 0.32
GNL3-208ENST00000479230 PRR29P0C7W0 189 aa16.98■□□□□ 0.31
GNL3-208ENST00000479230 STAG3Q9UJ98 1225 aa16.93■□□□□ 0.3
GNL3-208ENST00000479230 PRKAR2AP13861 404 aaKnown RBP16.89■□□□□ 0.29
GNL3-208ENST00000479230 CHADLQ6NUI6 762 aa16.87■□□□□ 0.29
GNL3-208ENST00000479230 CREBZFQ9NS37 354 aa16.74■□□□□ 0.27
GNL3-208ENST00000479230 FARP1Q9Y4F1 1045 aaPredicted RBP16.62■□□□□ 0.25
GNL3-208ENST00000479230 HAX1O00165 279 aa16.59■□□□□ 0.25
GNL3-208ENST00000479230 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
GNL3-208ENST00000479230 MNX1P50219 401 aaPredicted RBP16.54■□□□□ 0.24
GNL3-208ENST00000479230 MIER1Q8N108 512 aa16.53■□□□□ 0.24
GNL3-208ENST00000479230 EVX2Q03828 476 aa16.5■□□□□ 0.23
GNL3-208ENST00000479230 C19orf67A6NJJ6 358 aa16.49■□□□□ 0.23
GNL3-208ENST00000479230 PLCD3Q8N3E9 789 aa16.47■□□□□ 0.23
GNL3-208ENST00000479230 VASPP50552 380 aaPredicted RBP16.41■□□□□ 0.22
GNL3-208ENST00000479230 PLEKHG5O94827 1062 aa16.4■□□□□ 0.22
GNL3-208ENST00000479230 CD44P16070 742 aaKnown RBP16.38■□□□□ 0.21
GNL3-208ENST00000479230 NPM1P06748 294 aaKnown RBP eCLIP16.37■□□□□ 0.21
GNL3-208ENST00000479230 SP7Q8TDD2 431 aaPredicted RBP16.35■□□□□ 0.21
GNL3-208ENST00000479230 ZBTB47Q9UFB7 747 aaPredicted RBP16.24■□□□□ 0.19
GNL3-208ENST00000479230 ZRANB1Q9UGI0 708 aa16.24■□□□□ 0.19
GNL3-208ENST00000479230 RASEFQ8IZ41 740 aa16.2■□□□□ 0.18
GNL3-208ENST00000479230 IFNLR1Q8IU57 520 aaPredicted RBP16.19■□□□□ 0.18
GNL3-208ENST00000479230 PAK3O75914 559 aaPredicted RBP16.17■□□□□ 0.18
GNL3-208ENST00000479230 NUBP1P53384 320 aa16.17■□□□□ 0.18
GNL3-208ENST00000479230 KLHL34Q8N239 644 aa16.17■□□□□ 0.18
GNL3-208ENST00000479230 TSPYL2Q9H2G4 693 aaPredicted RBP16.17■□□□□ 0.18
GNL3-208ENST00000479230 ZNF579Q8NAF0 562 aaKnown RBP16.15■□□□□ 0.18
GNL3-208ENST00000479230 GABBR2O75899 941 aa16.11■□□□□ 0.17
GNL3-208ENST00000479230 PHF12Q96QT6 1004 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms