RNA–Protein interactions for RNA: ENST00000479043.1

ANKRD28-210, Transcript of ankyrin repeat domain 28, humanhuman

TSL 4

Gene ANKRD28, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-210ENST00000479043 AEBP2Q6ZN18 517 aaPredicted RBP28.23■■■□□ 2.11
ANKRD28-210ENST00000479043 CHIC1Q5VXU3 224 aa26.34■■□□□ 1.81
ANKRD28-210ENST00000479043 SENP3Q9H4L4 574 aaPredicted RBP24.14■■□□□ 1.45
ANKRD28-210ENST00000479043 PHF23Q9BUL5 403 aaPredicted RBP23.75■■□□□ 1.39
ANKRD28-210ENST00000479043 FOXD1Q16676 465 aa22.57■■□□□ 1.2
ANKRD28-210ENST00000479043 POTEDQ86YR6 584 aa21.7■■□□□ 1.06
ANKRD28-210ENST00000479043 MSH5O43196 834 aa21.31■■□□□ 1
ANKRD28-210ENST00000479043 PIAS4Q8N2W9 510 aaPredicted RBP20.94■□□□□ 0.94
ANKRD28-210ENST00000479043 PLPPR3Q6T4P5 718 aa20.75■□□□□ 0.91
ANKRD28-210ENST00000479043 PPP6R1Q9UPN7 881 aa20.72■□□□□ 0.91
ANKRD28-210ENST00000479043 ADRA2BP18089 450 aa20.6■□□□□ 0.89
ANKRD28-210ENST00000479043 MAPK8IP2Q13387 824 aaPredicted RBP19.08■□□□□ 0.64
ANKRD28-210ENST00000479043 DMRT2Q9Y5R5 561 aa19.08■□□□□ 0.64
ANKRD28-210ENST00000479043 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
ANKRD28-210ENST00000479043 CACNB1Q02641 598 aaPredicted RBP18.57■□□□□ 0.56
ANKRD28-210ENST00000479043 DCAF8L1A6NGE4 600 aa18.24■□□□□ 0.51
ANKRD28-210ENST00000479043 HOXD11P31277 338 aaPredicted RBP18.18■□□□□ 0.5
ANKRD28-210ENST00000479043 RNF39Q9H2S5 420 aa18.16■□□□□ 0.5
ANKRD28-210ENST00000479043 PPP4R3CPQ6ZMV5 832 aa18.12■□□□□ 0.49
ANKRD28-210ENST00000479043 CNKSR2Q8WXI2 1034 aa17.91■□□□□ 0.46
ANKRD28-210ENST00000479043 RNF216Q9NWF9 866 aaPredicted RBP17.89■□□□□ 0.45
ANKRD28-210ENST00000479043 C1QBPQ07021 282 aaKnown RBP17.85■□□□□ 0.45
ANKRD28-210ENST00000479043 DNAJC5BQ9UF47 199 aa17.68■□□□□ 0.42
ANKRD28-210ENST00000479043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.35
ANKRD28-210ENST00000479043 NCBP3Q53F19 620 aaKnown RBP17.25■□□□□ 0.35
ANKRD28-210ENST00000479043 NPM3O75607 178 aaKnown RBP17.04■□□□□ 0.32
ANKRD28-210ENST00000479043 POTEHQ6S545 545 aa16.89■□□□□ 0.29
ANKRD28-210ENST00000479043 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
ANKRD28-210ENST00000479043 DSG3P32926 999 aa16.83■□□□□ 0.28
ANKRD28-210ENST00000479043 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
ANKRD28-210ENST00000479043 CAPN15O75808 1086 aa16.74■□□□□ 0.27
ANKRD28-210ENST00000479043 SLC4A2P04920 1241 aa16.41■□□□□ 0.22
ANKRD28-210ENST00000479043 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
ANKRD28-210ENST00000479043 ZNF219Q9P2Y4 722 aaPredicted RBP16.33■□□□□ 0.2
ANKRD28-210ENST00000479043 ABCB7O75027 752 aa16.32■□□□□ 0.2
ANKRD28-210ENST00000479043 APLP2Q06481 763 aa16.32■□□□□ 0.2
ANKRD28-210ENST00000479043 KCNA4P22459 653 aa16.24■□□□□ 0.19
ANKRD28-210ENST00000479043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.2■□□□□ 0.18
ANKRD28-210ENST00000479043 HNRNPUL2Q1KMD3 747 aaKnown RBP16.2■□□□□ 0.18
ANKRD28-210ENST00000479043 SAMD1Q6SPF0 538 aaPredicted RBP16.08■□□□□ 0.16
ANKRD28-210ENST00000479043 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
ANKRD28-210ENST00000479043 CHRDL2Q6WN34 429 aa15.9■□□□□ 0.14
ANKRD28-210ENST00000479043 POLA2Q14181 598 aa15.82■□□□□ 0.12
ANKRD28-210ENST00000479043 MYCNP04198 464 aaPredicted RBP15.76■□□□□ 0.11
ANKRD28-210ENST00000479043 SP7Q8TDD2 431 aaPredicted RBP15.6■□□□□ 0.09
ANKRD28-210ENST00000479043 AKT1S1Q96B36 256 aa15.57■□□□□ 0.08
ANKRD28-210ENST00000479043 ZBTB12Q9Y330 459 aaPredicted RBP15.46■□□□□ 0.07
ANKRD28-210ENST00000479043 ATF5Q9Y2D1 282 aaPredicted RBP15.45■□□□□ 0.06
ANKRD28-210ENST00000479043 REM2Q8IYK8 340 aaPredicted RBP15.43■□□□□ 0.06
ANKRD28-210ENST00000479043 PIP4P2Q8N4L2 257 aa15.43■□□□□ 0.06
ANKRD28-210ENST00000479043 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
ANKRD28-210ENST00000479043 FOXD4L1Q9NU39 408 aa15.3■□□□□ 0.04
ANKRD28-210ENST00000479043 PITPNM1O00562 1244 aa15.27■□□□□ 0.04
ANKRD28-210ENST00000479043 FXR2P51116 673 aaKnown RBP eCLIP15.26■□□□□ 0.03
ANKRD28-210ENST00000479043 HAX1O00165 279 aa15.25■□□□□ 0.03
ANKRD28-210ENST00000479043 SLC4A1APQ9BWU0 796 aaKnown RBP15.2■□□□□ 0.02
ANKRD28-210ENST00000479043 EVX2Q03828 476 aa15.07■□□□□ 0
ANKRD28-210ENST00000479043 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
ANKRD28-210ENST00000479043 ZBTB22O15209 634 aa14.94□□□□□ -0.02
ANKRD28-210ENST00000479043 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
ANKRD28-210ENST00000479043 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
ANKRD28-210ENST00000479043 ATXN8OSP0DMR3 200 aa14.9□□□□□ -0.02
ANKRD28-210ENST00000479043 PRKAR2AP13861 404 aaKnown RBP14.86□□□□□ -0.03
ANKRD28-210ENST00000479043 FBLN2P98095 1184 aa14.84□□□□□ -0.03
ANKRD28-210ENST00000479043 SPDYE1Q8NFV5 336 aaPredicted RBP14.8□□□□□ -0.04
ANKRD28-210ENST00000479043 C19orf67A6NJJ6 358 aa14.79□□□□□ -0.04
ANKRD28-210ENST00000479043 CLEC11AQ9Y240 323 aa14.78□□□□□ -0.04
ANKRD28-210ENST00000479043 MKRN4PQ13434 485 aaPredicted RBP14.72□□□□□ -0.05
ANKRD28-210ENST00000479043 SSUH2Q9Y2M2 353 aa14.71□□□□□ -0.05
ANKRD28-210ENST00000479043 GABBR2O75899 941 aa14.68□□□□□ -0.06
ANKRD28-210ENST00000479043 ZNF692Q9BU19 519 aaPredicted RBP14.66□□□□□ -0.06
ANKRD28-210ENST00000479043 LHX8Q68G74 356 aa14.61□□□□□ -0.07
ANKRD28-210ENST00000479043 CHADLQ6NUI6 762 aa14.57□□□□□ -0.08
ANKRD28-210ENST00000479043 PRR29P0C7W0 189 aa14.47□□□□□ -0.09
ANKRD28-210ENST00000479043 PABPN1Q86U42 306 aaKnown RBP eCLIP14.44□□□□□ -0.1
ANKRD28-210ENST00000479043 POTEIP0CG38 1075 aa14.39□□□□□ -0.11
ANKRD28-210ENST00000479043 CD44P16070 742 aaKnown RBP14.35□□□□□ -0.11
ANKRD28-210ENST00000479043 FARP1Q9Y4F1 1045 aaPredicted RBP14.31□□□□□ -0.12
ANKRD28-210ENST00000479043 CLCN6P51797 869 aa14.28□□□□□ -0.12
ANKRD28-210ENST00000479043 DCBLD2Q96PD2 775 aa14.14□□□□□ -0.15
ANKRD28-210ENST00000479043 ZNF579Q8NAF0 562 aaKnown RBP14.13□□□□□ -0.15
ANKRD28-210ENST00000479043 ZRANB1Q9UGI0 708 aa14.06□□□□□ -0.16
ANKRD28-210ENST00000479043 PLSCR2Q9NRY7 297 aa14.05□□□□□ -0.16
ANKRD28-210ENST00000479043 CREBZFQ9NS37 354 aa14.03□□□□□ -0.16
ANKRD28-210ENST00000479043 GALR2O43603 387 aaPredicted RBP13.99□□□□□ -0.17
ANKRD28-210ENST00000479043 OTUD5Q96G74 571 aa13.96□□□□□ -0.17
ANKRD28-210ENST00000479043 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
ANKRD28-210ENST00000479043 POTEB2H3BUK9 544 aa13.91□□□□□ -0.18
ANKRD28-210ENST00000479043 PHF12Q96QT6 1004 aa13.83□□□□□ -0.2
ANKRD28-210ENST00000479043 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
ANKRD28-210ENST00000479043 POTEMA6NI47 508 aa13.78□□□□□ -0.2
ANKRD28-210ENST00000479043 PELP1Q8IZL8 1130 aaKnown RBP13.77□□□□□ -0.21
ANKRD28-210ENST00000479043 CSRNP3Q8WYN3 585 aa13.77□□□□□ -0.21
ANKRD28-210ENST00000479043 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
ANKRD28-210ENST00000479043 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
ANKRD28-210ENST00000479043 POTEGQ6S5H5 508 aa13.72□□□□□ -0.21
ANKRD28-210ENST00000479043 NPM1P06748 294 aaKnown RBP eCLIP13.71□□□□□ -0.21
ANKRD28-210ENST00000479043 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
ANKRD28-210ENST00000479043 METRNQ9UJH8 293 aa13.65□□□□□ -0.22
ANKRD28-210ENST00000479043 MS4A3Q96HJ5 214 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms