RNA–Protein interactions for RNA: ENST00000479012.1

LNPK-208, Transcript of lunapark, ER junction formation factor, humanhuman

TSL 1 (best)

Gene LNPK, Length 774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNPK-208ENST00000479012 AEBP2Q6ZN18 517 aaPredicted RBP38.99■■■■□ 3.83
LNPK-208ENST00000479012 CHIC1Q5VXU3 224 aa37.63■■■■□ 3.61
LNPK-208ENST00000479012 PHF23Q9BUL5 403 aaPredicted RBP33.09■■■□□ 2.89
LNPK-208ENST00000479012 SENP3Q9H4L4 574 aaPredicted RBP33.07■■■□□ 2.88
LNPK-208ENST00000479012 FOXD1Q16676 465 aa30.8■■■□□ 2.52
LNPK-208ENST00000479012 PLPPR3Q6T4P5 718 aa30.3■■■□□ 2.44
LNPK-208ENST00000479012 PPP6R1Q9UPN7 881 aa29.33■■■□□ 2.29
LNPK-208ENST00000479012 ADRA2BP18089 450 aa29.21■■■□□ 2.27
LNPK-208ENST00000479012 PIAS4Q8N2W9 510 aaPredicted RBP28.82■■■□□ 2.2
LNPK-208ENST00000479012 MSH5O43196 834 aa28.5■■■□□ 2.15
LNPK-208ENST00000479012 POTEDQ86YR6 584 aa26.75■■□□□ 1.87
LNPK-208ENST00000479012 SCAF1Q9H7N4 1312 aaKnown RBP26.67■■□□□ 1.86
LNPK-208ENST00000479012 PPP4R3CPQ6ZMV5 832 aa26.66■■□□□ 1.86
LNPK-208ENST00000479012 MAPK8IP2Q13387 824 aaPredicted RBP26.65■■□□□ 1.86
LNPK-208ENST00000479012 DMRT2Q9Y5R5 561 aa26.37■■□□□ 1.81
LNPK-208ENST00000479012 CNKSR2Q8WXI2 1034 aa26.02■■□□□ 1.76
LNPK-208ENST00000479012 NCBP3Q53F19 620 aaKnown RBP25.78■■□□□ 1.72
LNPK-208ENST00000479012 HOXD11P31277 338 aaPredicted RBP25.7■■□□□ 1.7
LNPK-208ENST00000479012 RNF216Q9NWF9 866 aaPredicted RBP25.64■■□□□ 1.7
LNPK-208ENST00000479012 KCNA4P22459 653 aa25.56■■□□□ 1.68
LNPK-208ENST00000479012 NPM3O75607 178 aaKnown RBP25.48■■□□□ 1.67
LNPK-208ENST00000479012 DCAF8L1A6NGE4 600 aa25.03■■□□□ 1.6
LNPK-208ENST00000479012 DNAJC5BQ9UF47 199 aa24.99■■□□□ 1.59
LNPK-208ENST00000479012 RNF39Q9H2S5 420 aa24.44■■□□□ 1.5
LNPK-208ENST00000479012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.32■■□□□ 1.48
LNPK-208ENST00000479012 SLC4A2P04920 1241 aa24.22■■□□□ 1.47
LNPK-208ENST00000479012 SLC4A1APQ9BWU0 796 aaKnown RBP24.2■■□□□ 1.46
LNPK-208ENST00000479012 C1QBPQ07021 282 aaKnown RBP24.1■■□□□ 1.45
LNPK-208ENST00000479012 U3KPZ7 1027 aaPredicted RBP24■■□□□ 1.43
LNPK-208ENST00000479012 CACNB1Q02641 598 aaPredicted RBP23.99■■□□□ 1.43
LNPK-208ENST00000479012 FOXD4L1Q9NU39 408 aa23.62■■□□□ 1.37
LNPK-208ENST00000479012 ZBTB22O15209 634 aa23.56■■□□□ 1.36
LNPK-208ENST00000479012 MYCNP04198 464 aaPredicted RBP23.51■■□□□ 1.35
LNPK-208ENST00000479012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.46■■□□□ 1.35
LNPK-208ENST00000479012 HNRNPUL2Q1KMD3 747 aaKnown RBP23.46■■□□□ 1.35
LNPK-208ENST00000479012 SPINK5Q9NQ38 1064 aaPredicted RBP23.42■■□□□ 1.34
LNPK-208ENST00000479012 SAMD1Q6SPF0 538 aaPredicted RBP23.38■■□□□ 1.33
LNPK-208ENST00000479012 APLP2Q06481 763 aa23.28■■□□□ 1.32
LNPK-208ENST00000479012 CAPN15O75808 1086 aa23.25■■□□□ 1.31
LNPK-208ENST00000479012 DSG3P32926 999 aa23.1■■□□□ 1.29
LNPK-208ENST00000479012 ZNF219Q9P2Y4 722 aaPredicted RBP23.07■■□□□ 1.28
LNPK-208ENST00000479012 CSRNP3Q8WYN3 585 aa23.06■■□□□ 1.28
LNPK-208ENST00000479012 TRHP20396 242 aaPredicted RBP23.03■■□□□ 1.28
LNPK-208ENST00000479012 ATF5Q9Y2D1 282 aaPredicted RBP22.98■■□□□ 1.27
LNPK-208ENST00000479012 EHMT2Q96KQ7 1210 aa22.94■■□□□ 1.26
LNPK-208ENST00000479012 ATXN8OSP0DMR3 200 aa22.9■■□□□ 1.26
LNPK-208ENST00000479012 ABCB7O75027 752 aa22.78■■□□□ 1.24
LNPK-208ENST00000479012 POLA2Q14181 598 aa22.64■■□□□ 1.21
LNPK-208ENST00000479012 ZBTB12Q9Y330 459 aaPredicted RBP22.21■■□□□ 1.15
LNPK-208ENST00000479012 MKRN4PQ13434 485 aaPredicted RBP21.98■■□□□ 1.11
LNPK-208ENST00000479012 RBM42Q9BTD8 480 aaKnown RBP21.94■■□□□ 1.1
LNPK-208ENST00000479012 FBLN2P98095 1184 aa21.91■■□□□ 1.1
LNPK-208ENST00000479012 OSCARQ8IYS5 282 aa21.86■■□□□ 1.09
LNPK-208ENST00000479012 SPDYE2BA6NHP3 402 aa21.63■■□□□ 1.05
LNPK-208ENST00000479012 SPDYE6P0CI01 402 aa21.63■■□□□ 1.05
LNPK-208ENST00000479012 SPDYE2Q495Y8 402 aa21.63■■□□□ 1.05
LNPK-208ENST00000479012 AKT1S1Q96B36 256 aa21.63■■□□□ 1.05
LNPK-208ENST00000479012 SSUH2Q9Y2M2 353 aa21.46■■□□□ 1.03
LNPK-208ENST00000479012 REM2Q8IYK8 340 aaPredicted RBP21.43■■□□□ 1.02
LNPK-208ENST00000479012 ZNF692Q9BU19 519 aaPredicted RBP21.41■■□□□ 1.02
LNPK-208ENST00000479012 CHRDL2Q6WN34 429 aa21.22■□□□□ 0.99
LNPK-208ENST00000479012 SPDYE4A6NLX3 237 aa21.17■□□□□ 0.98
LNPK-208ENST00000479012 PITPNM1O00562 1244 aa21.17■□□□□ 0.98
LNPK-208ENST00000479012 PABPN1Q86U42 306 aaKnown RBP eCLIP21.13■□□□□ 0.97
LNPK-208ENST00000479012 POTEHQ6S545 545 aa21.06■□□□□ 0.96
LNPK-208ENST00000479012 SPDYE1Q8NFV5 336 aaPredicted RBP21.05■□□□□ 0.96
LNPK-208ENST00000479012 FXR2P51116 673 aaKnown RBP eCLIP20.93■□□□□ 0.94
LNPK-208ENST00000479012 PROM2Q8N271 834 aa20.93■□□□□ 0.94
LNPK-208ENST00000479012 PIP4P2Q8N4L2 257 aa20.89■□□□□ 0.93
LNPK-208ENST00000479012 CLEC11AQ9Y240 323 aa20.89■□□□□ 0.93
LNPK-208ENST00000479012 FKBP8Q14318 412 aa20.75■□□□□ 0.91
LNPK-208ENST00000479012 PRR29P0C7W0 189 aa20.7■□□□□ 0.9
LNPK-208ENST00000479012 STAG3Q9UJ98 1225 aa20.7■□□□□ 0.9
LNPK-208ENST00000479012 PRKAR2AP13861 404 aaKnown RBP20.59■□□□□ 0.89
LNPK-208ENST00000479012 CHADLQ6NUI6 762 aa20.49■□□□□ 0.87
LNPK-208ENST00000479012 CREBZFQ9NS37 354 aa20.44■□□□□ 0.86
LNPK-208ENST00000479012 FARP1Q9Y4F1 1045 aaPredicted RBP20.31■□□□□ 0.84
LNPK-208ENST00000479012 HAX1O00165 279 aa20.25■□□□□ 0.83
LNPK-208ENST00000479012 MNX1P50219 401 aaPredicted RBP20.24■□□□□ 0.83
LNPK-208ENST00000479012 C19orf67A6NJJ6 358 aa20.22■□□□□ 0.83
LNPK-208ENST00000479012 EVX2Q03828 476 aa20.18■□□□□ 0.82
LNPK-208ENST00000479012 FBXO3Q9UK99 471 aa20.14■□□□□ 0.81
LNPK-208ENST00000479012 MIER1Q8N108 512 aa20.08■□□□□ 0.81
LNPK-208ENST00000479012 SP7Q8TDD2 431 aaPredicted RBP20.04■□□□□ 0.8
LNPK-208ENST00000479012 NPM1P06748 294 aaKnown RBP eCLIP19.98■□□□□ 0.79
LNPK-208ENST00000479012 CD44P16070 742 aaKnown RBP19.97■□□□□ 0.79
LNPK-208ENST00000479012 PLCD3Q8N3E9 789 aa19.96■□□□□ 0.79
LNPK-208ENST00000479012 PLEKHG5O94827 1062 aa19.93■□□□□ 0.78
LNPK-208ENST00000479012 VASPP50552 380 aaPredicted RBP19.91■□□□□ 0.78
LNPK-208ENST00000479012 ZBTB47Q9UFB7 747 aaPredicted RBP19.81■□□□□ 0.76
LNPK-208ENST00000479012 ZRANB1Q9UGI0 708 aa19.78■□□□□ 0.76
LNPK-208ENST00000479012 ZNF579Q8NAF0 562 aaKnown RBP19.76■□□□□ 0.75
LNPK-208ENST00000479012 NUBP1P53384 320 aa19.74■□□□□ 0.75
LNPK-208ENST00000479012 GABBR2O75899 941 aa19.72■□□□□ 0.75
LNPK-208ENST00000479012 RASEFQ8IZ41 740 aa19.71■□□□□ 0.75
LNPK-208ENST00000479012 PAK3O75914 559 aaPredicted RBP19.69■□□□□ 0.74
LNPK-208ENST00000479012 CLCN6P51797 869 aa19.66■□□□□ 0.74
LNPK-208ENST00000479012 IFNLR1Q8IU57 520 aaPredicted RBP19.66■□□□□ 0.74
LNPK-208ENST00000479012 TSPYL2Q9H2G4 693 aaPredicted RBP19.62■□□□□ 0.73
LNPK-208ENST00000479012 CCDC61Q9Y6R9 512 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms