RNA–Protein interactions for RNA: ENST00000478555.1

MFSD4A-205, Transcript of major facilitator superfamily domain containing 4A, humanhuman

TSL 2

Gene MFSD4A, Length 3,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD4A-205ENST00000478555 PELP1Q8IZL8 1130 aaKnown RBP12.88□□□□□ -0.35
MFSD4A-205ENST00000478555 MYT1Q01538 1121 aa12.62□□□□□ -0.39
MFSD4A-205ENST00000478555 HRCP23327 699 aa12.31□□□□□ -0.44
MFSD4A-205ENST00000478555 TTBK1Q5TCY1 1321 aaPredicted RBP12.08□□□□□ -0.48
MFSD4A-205ENST00000478555 SCAF1Q9H7N4 1312 aaKnown RBP11.9□□□□□ -0.5
MFSD4A-205ENST00000478555 NISCHQ9Y2I1 1504 aa11.84□□□□□ -0.51
MFSD4A-205ENST00000478555 PPARGC1BQ86YN6 1023 aaKnown RBP11.83□□□□□ -0.52
MFSD4A-205ENST00000478555 PCGF6Q9BYE7 350 aa11.61□□□□□ -0.55
MFSD4A-205ENST00000478555 PRKCSHP14314 528 aaPredicted RBP11.53□□□□□ -0.56
MFSD4A-205ENST00000478555 BCL11AQ9H165 835 aa11.5□□□□□ -0.57
MFSD4A-205ENST00000478555 ACIN1Q9UKV3 1341 aaKnown RBP11.48□□□□□ -0.57
MFSD4A-205ENST00000478555 MYO15BQ96JP2 1530 aa11.43□□□□□ -0.58
MFSD4A-205ENST00000478555 ZEB1P37275 1124 aaPredicted RBP11.42□□□□□ -0.58
MFSD4A-205ENST00000478555 CENPBP07199 599 aaPredicted RBP11.39□□□□□ -0.59
MFSD4A-205ENST00000478555 ERICH6Q7L0X2 663 aa11.38□□□□□ -0.59
MFSD4A-205ENST00000478555 FAM9AQ8IZU1 332 aaPredicted RBP11.37□□□□□ -0.59
MFSD4A-205ENST00000478555 DCAF1Q9Y4B6 1507 aa11.36□□□□□ -0.59
MFSD4A-205ENST00000478555 NEUROD1Q13562 356 aa11.35□□□□□ -0.59
MFSD4A-205ENST00000478555 GTF3C3Q9Y5Q9 886 aa11.34□□□□□ -0.59
MFSD4A-205ENST00000478555 APLP2Q06481 763 aa11.33□□□□□ -0.6
MFSD4A-205ENST00000478555 CCDC180Q9P1Z9 1646 aa11.31□□□□□ -0.6
MFSD4A-205ENST00000478555 TRIM26Q12899 539 aaPredicted RBP11.24□□□□□ -0.61
MFSD4A-205ENST00000478555 ANP32EQ9BTT0 268 aa11.17□□□□□ -0.62
MFSD4A-205ENST00000478555 CHIC1Q5VXU3 224 aa11.09□□□□□ -0.63
MFSD4A-205ENST00000478555 CSRNP3Q8WYN3 585 aa10.99□□□□□ -0.65
MFSD4A-205ENST00000478555 DIEXFQ68CQ4 756 aaKnown RBP10.92□□□□□ -0.66
MFSD4A-205ENST00000478555 SUPT5HO00267 1087 aaKnown RBP10.89□□□□□ -0.67
MFSD4A-205ENST00000478555 CLSPNQ9HAW4 1339 aa10.86□□□□□ -0.67
MFSD4A-205ENST00000478555 TSHZ2Q9NRE2 1034 aa10.83□□□□□ -0.68
MFSD4A-205ENST00000478555 SLC24A1O60721 1099 aa10.78□□□□□ -0.68
MFSD4A-205ENST00000478555 TRIM41Q8WV44 630 aa10.78□□□□□ -0.68
MFSD4A-205ENST00000478555 LOC105371045A0A1W2PR82 267 aa10.77□□□□□ -0.69
MFSD4A-205ENST00000478555 SUPT16HQ9Y5B9 1047 aaKnown RBP10.7□□□□□ -0.7
MFSD4A-205ENST00000478555 UBE2Q2Q8WVN8 375 aa10.7□□□□□ -0.7
MFSD4A-205ENST00000478555 ANO8Q9HCE9 1232 aaPredicted RBP10.67□□□□□ -0.7
MFSD4A-205ENST00000478555 SHROOM4Q9ULL8 1493 aa10.66□□□□□ -0.7
MFSD4A-205ENST00000478555 YTHDC1Q96MU7 727 aaKnown RBP10.63□□□□□ -0.71
MFSD4A-205ENST00000478555 MYT1LQ9UL68 1186 aa10.63□□□□□ -0.71
MFSD4A-205ENST00000478555 ZNF316A6NFI3 1004 aaPredicted RBP10.61□□□□□ -0.71
MFSD4A-205ENST00000478555 ERICH6BQ5W0A0 696 aa10.59□□□□□ -0.71
MFSD4A-205ENST00000478555 CCER1Q8TC90 406 aaPredicted RBP10.58□□□□□ -0.72
MFSD4A-205ENST00000478555 DAXXQ9UER7 740 aaPredicted RBP10.58□□□□□ -0.72
MFSD4A-205ENST00000478555 EIF5BO60841 1220 aaKnown RBP10.57□□□□□ -0.72
MFSD4A-205ENST00000478555 MIER1Q8N108 512 aa10.56□□□□□ -0.72
MFSD4A-205ENST00000478555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.54□□□□□ -0.72
MFSD4A-205ENST00000478555 RBM19Q9Y4C8 960 aaKnown RBP10.5□□□□□ -0.73
MFSD4A-205ENST00000478555 AEBP2Q6ZN18 517 aaPredicted RBP10.49□□□□□ -0.73
MFSD4A-205ENST00000478555 SALL2Q9Y467 1007 aaPredicted RBP10.49□□□□□ -0.73
MFSD4A-205ENST00000478555 MSH5O43196 834 aa10.47□□□□□ -0.73
MFSD4A-205ENST00000478555 DEKP35659 375 aaKnown RBP10.44□□□□□ -0.74
MFSD4A-205ENST00000478555 FANCIQ9NVI1 1328 aa10.43□□□□□ -0.74
MFSD4A-205ENST00000478555 PKNOX2Q96KN3 472 aa10.37□□□□□ -0.75
MFSD4A-205ENST00000478555 CCDC136Q96JN2 1154 aa10.35□□□□□ -0.75
MFSD4A-205ENST00000478555 PLEKHG5O94827 1062 aa10.26□□□□□ -0.77
MFSD4A-205ENST00000478555 PODXL2Q9NZ53 605 aa10.24□□□□□ -0.77
MFSD4A-205ENST00000478555 FKBP8Q14318 412 aa10.22□□□□□ -0.77
MFSD4A-205ENST00000478555 BCANQ96GW7 911 aa10.21□□□□□ -0.78
MFSD4A-205ENST00000478555 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.21□□□□□ -0.78
MFSD4A-205ENST00000478555 ZCCHC6Q5VYS8 1495 aaKnown RBP10.2□□□□□ -0.78
MFSD4A-205ENST00000478555 IL27Q8NEV9 243 aa10.18□□□□□ -0.78
MFSD4A-205ENST00000478555 NEFLP07196 543 aa10.14□□□□□ -0.79
MFSD4A-205ENST00000478555 WRNQ14191 1432 aaPredicted RBP eCLIP10.13□□□□□ -0.79
MFSD4A-205ENST00000478555 C11orf95C9JLR9 678 aaPredicted RBP10.12□□□□□ -0.79
MFSD4A-205ENST00000478555 CDK11AQ9UQ88 783 aaPredicted RBP10.11□□□□□ -0.79
MFSD4A-205ENST00000478555 NOP58Q9Y2X3 529 aaKnown RBP10.09□□□□□ -0.79
MFSD4A-205ENST00000478555 ITGAEP38570 1179 aa10.08□□□□□ -0.8
MFSD4A-205ENST00000478555 GLIPR1L2Q4G1C9 344 aa10.08□□□□□ -0.8
MFSD4A-205ENST00000478555 RTN4Q9NQC3 1192 aaKnown RBP10.07□□□□□ -0.8
MFSD4A-205ENST00000478555 WASHC2AQ641Q2 1341 aa10.05□□□□□ -0.8
MFSD4A-205ENST00000478555 RSPH6AQ9H0K4 717 aa10.04□□□□□ -0.8
MFSD4A-205ENST00000478555 NBR1Q14596 966 aa10.04□□□□□ -0.8
MFSD4A-205ENST00000478555 ZMYND15Q9H091 742 aa10.04□□□□□ -0.8
MFSD4A-205ENST00000478555 WASHC2CQ9Y4E1 1318 aa10.03□□□□□ -0.8
MFSD4A-205ENST00000478555 RTL5Q5HYW3 569 aaPredicted RBP10.03□□□□□ -0.8
MFSD4A-205ENST00000478555 PAK3O75914 559 aaPredicted RBP9.99□□□□□ -0.81
MFSD4A-205ENST00000478555 KCNH8Q96L42 1107 aa9.97□□□□□ -0.81
MFSD4A-205ENST00000478555 USP35Q9P2H5 1018 aa9.97□□□□□ -0.81
MFSD4A-205ENST00000478555 VSIG10Q8N0Z9 540 aa9.94□□□□□ -0.82
MFSD4A-205ENST00000478555 IPO9Q96P70 1041 aaKnown RBP9.92□□□□□ -0.82
MFSD4A-205ENST00000478555 FGD1P98174 961 aa9.91□□□□□ -0.82
MFSD4A-205ENST00000478555 TIMELESSQ9UNS1 1208 aa9.9□□□□□ -0.83
MFSD4A-205ENST00000478555 PPP4R2Q9NY27 417 aa9.89□□□□□ -0.83
MFSD4A-205ENST00000478555 CCER2I3L3R5 266 aa9.89□□□□□ -0.83
MFSD4A-205ENST00000478555 FAM43AQ8N2R8 423 aa9.88□□□□□ -0.83
MFSD4A-205ENST00000478555 AAMPQ13685 434 aa9.87□□□□□ -0.83
MFSD4A-205ENST00000478555 ZBTB47Q9UFB7 747 aaPredicted RBP9.87□□□□□ -0.83
MFSD4A-205ENST00000478555 PDE4CQ08493 712 aa9.87□□□□□ -0.83
MFSD4A-205ENST00000478555 BRPF3Q9ULD4 1205 aa9.86□□□□□ -0.83
MFSD4A-205ENST00000478555 EHMT2Q96KQ7 1210 aa9.85□□□□□ -0.83
MFSD4A-205ENST00000478555 ANP32AP39687 249 aaKnown RBP9.85□□□□□ -0.83
MFSD4A-205ENST00000478555 RBM10P98175 930 aaKnown RBP9.84□□□□□ -0.83
MFSD4A-205ENST00000478555 RRP9O43818 475 aaKnown RBP9.83□□□□□ -0.84
MFSD4A-205ENST00000478555 CEP162Q5TB80 1403 aa9.82□□□□□ -0.84
MFSD4A-205ENST00000478555 DHX57Q6P158 1386 aaKnown RBP9.81□□□□□ -0.84
MFSD4A-205ENST00000478555 PDIA4P13667 645 aaKnown RBP9.81□□□□□ -0.84
MFSD4A-205ENST00000478555 NEFMP07197 916 aa9.81□□□□□ -0.84
MFSD4A-205ENST00000478555 EEA1Q15075 1411 aa9.8□□□□□ -0.84
MFSD4A-205ENST00000478555 GSE1Q14687 1217 aa9.8□□□□□ -0.84
MFSD4A-205ENST00000478555 TRIM52Q96A61 297 aa9.8□□□□□ -0.84
MFSD4A-205ENST00000478555 NACADO15069 1562 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms