RNA–Protein interactions for RNA: ENST00000478538.1

ITGB3BP-211, Transcript of integrin subunit beta 3 binding protein, humanhuman

TSL 3

Gene ITGB3BP, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3BP-211ENST00000478538 AEBP2Q6ZN18 517 aaPredicted RBP19.89■□□□□ 0.77
ITGB3BP-211ENST00000478538 CHIC1Q5VXU3 224 aa18.46■□□□□ 0.55
ITGB3BP-211ENST00000478538 SENP3Q9H4L4 574 aaPredicted RBP16.94■□□□□ 0.3
ITGB3BP-211ENST00000478538 PHF23Q9BUL5 403 aaPredicted RBP16.67■□□□□ 0.26
ITGB3BP-211ENST00000478538 FOXD1Q16676 465 aa15.92■□□□□ 0.14
ITGB3BP-211ENST00000478538 POTEDQ86YR6 584 aa15.61■□□□□ 0.09
ITGB3BP-211ENST00000478538 MSH5O43196 834 aa15.01□□□□□ -0.01
ITGB3BP-211ENST00000478538 PIAS4Q8N2W9 510 aaPredicted RBP14.74□□□□□ -0.05
ITGB3BP-211ENST00000478538 PPP6R1Q9UPN7 881 aa14.52□□□□□ -0.09
ITGB3BP-211ENST00000478538 ADRA2BP18089 450 aa14.43□□□□□ -0.1
ITGB3BP-211ENST00000478538 PLPPR3Q6T4P5 718 aa14.36□□□□□ -0.11
ITGB3BP-211ENST00000478538 MAPK8IP2Q13387 824 aaPredicted RBP13.43□□□□□ -0.26
ITGB3BP-211ENST00000478538 DMRT2Q9Y5R5 561 aa13.38□□□□□ -0.27
ITGB3BP-211ENST00000478538 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
ITGB3BP-211ENST00000478538 SCAF1Q9H7N4 1312 aaKnown RBP13.05□□□□□ -0.32
ITGB3BP-211ENST00000478538 DCAF8L1A6NGE4 600 aa12.88□□□□□ -0.35
ITGB3BP-211ENST00000478538 RNF39Q9H2S5 420 aa12.8□□□□□ -0.36
ITGB3BP-211ENST00000478538 HOXD11P31277 338 aaPredicted RBP12.67□□□□□ -0.38
ITGB3BP-211ENST00000478538 KCNA4P22459 653 aa12.65□□□□□ -0.38
ITGB3BP-211ENST00000478538 PPP4R3CPQ6ZMV5 832 aa12.56□□□□□ -0.4
ITGB3BP-211ENST00000478538 C1QBPQ07021 282 aaKnown RBP12.53□□□□□ -0.4
ITGB3BP-211ENST00000478538 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
ITGB3BP-211ENST00000478538 CNKSR2Q8WXI2 1034 aa12.4□□□□□ -0.42
ITGB3BP-211ENST00000478538 EHMT2Q96KQ7 1210 aa12.24□□□□□ -0.45
ITGB3BP-211ENST00000478538 DNAJC5BQ9UF47 199 aa12.23□□□□□ -0.45
ITGB3BP-211ENST00000478538 NCBP3Q53F19 620 aaKnown RBP12.22□□□□□ -0.45
ITGB3BP-211ENST00000478538 POTEHQ6S545 545 aa12.11□□□□□ -0.47
ITGB3BP-211ENST00000478538 SLC4A1APQ9BWU0 796 aaKnown RBP12.11□□□□□ -0.47
ITGB3BP-211ENST00000478538 NPM3O75607 178 aaKnown RBP12.07□□□□□ -0.48
ITGB3BP-211ENST00000478538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.06□□□□□ -0.48
ITGB3BP-211ENST00000478538 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
ITGB3BP-211ENST00000478538 DSG3P32926 999 aa11.83□□□□□ -0.52
ITGB3BP-211ENST00000478538 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
ITGB3BP-211ENST00000478538 U3KPZ7 1027 aaPredicted RBP11.82□□□□□ -0.52
ITGB3BP-211ENST00000478538 CAPN15O75808 1086 aa11.77□□□□□ -0.53
ITGB3BP-211ENST00000478538 ZBTB22O15209 634 aa11.67□□□□□ -0.54
ITGB3BP-211ENST00000478538 FOXD4L1Q9NU39 408 aa11.53□□□□□ -0.56
ITGB3BP-211ENST00000478538 ABCB7O75027 752 aa11.52□□□□□ -0.57
ITGB3BP-211ENST00000478538 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
ITGB3BP-211ENST00000478538 SLC4A2P04920 1241 aa11.39□□□□□ -0.59
ITGB3BP-211ENST00000478538 ZNF219Q9P2Y4 722 aaPredicted RBP11.37□□□□□ -0.59
ITGB3BP-211ENST00000478538 APLP2Q06481 763 aa11.27□□□□□ -0.61
ITGB3BP-211ENST00000478538 CHRDL2Q6WN34 429 aa11.24□□□□□ -0.61
ITGB3BP-211ENST00000478538 RBM42Q9BTD8 480 aaKnown RBP11.22□□□□□ -0.61
ITGB3BP-211ENST00000478538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.16□□□□□ -0.62
ITGB3BP-211ENST00000478538 MYCNP04198 464 aaPredicted RBP11.16□□□□□ -0.62
ITGB3BP-211ENST00000478538 HNRNPUL2Q1KMD3 747 aaKnown RBP11.16□□□□□ -0.62
ITGB3BP-211ENST00000478538 SAMD1Q6SPF0 538 aaPredicted RBP11.11□□□□□ -0.63
ITGB3BP-211ENST00000478538 SP7Q8TDD2 431 aaPredicted RBP11.1□□□□□ -0.63
ITGB3BP-211ENST00000478538 ATXN8OSP0DMR3 200 aa11.09□□□□□ -0.63
ITGB3BP-211ENST00000478538 POLA2Q14181 598 aa11.03□□□□□ -0.64
ITGB3BP-211ENST00000478538 PIP4P2Q8N4L2 257 aa10.89□□□□□ -0.67
ITGB3BP-211ENST00000478538 AKT1S1Q96B36 256 aa10.87□□□□□ -0.67
ITGB3BP-211ENST00000478538 REM2Q8IYK8 340 aaPredicted RBP10.82□□□□□ -0.68
ITGB3BP-211ENST00000478538 HAX1O00165 279 aa10.8□□□□□ -0.68
ITGB3BP-211ENST00000478538 ATF5Q9Y2D1 282 aaPredicted RBP10.8□□□□□ -0.68
ITGB3BP-211ENST00000478538 OSCARQ8IYS5 282 aa10.76□□□□□ -0.69
ITGB3BP-211ENST00000478538 PITPNM1O00562 1244 aa10.75□□□□□ -0.69
ITGB3BP-211ENST00000478538 FKBP8Q14318 412 aa10.74□□□□□ -0.69
ITGB3BP-211ENST00000478538 FXR2P51116 673 aaKnown RBP eCLIP10.71□□□□□ -0.69
ITGB3BP-211ENST00000478538 EVX2Q03828 476 aa10.71□□□□□ -0.69
ITGB3BP-211ENST00000478538 ZBTB12Q9Y330 459 aaPredicted RBP10.68□□□□□ -0.7
ITGB3BP-211ENST00000478538 AMER1Q5JTC6 1135 aaPredicted RBP10.58□□□□□ -0.72
ITGB3BP-211ENST00000478538 RTN4Q9NQC3 1192 aaKnown RBP10.55□□□□□ -0.72
ITGB3BP-211ENST00000478538 PRKAR2AP13861 404 aaKnown RBP10.44□□□□□ -0.74
ITGB3BP-211ENST00000478538 C19orf67A6NJJ6 358 aa10.39□□□□□ -0.75
ITGB3BP-211ENST00000478538 LHX8Q68G74 356 aa10.39□□□□□ -0.75
ITGB3BP-211ENST00000478538 MKRN4PQ13434 485 aaPredicted RBP10.38□□□□□ -0.75
ITGB3BP-211ENST00000478538 GABBR2O75899 941 aa10.37□□□□□ -0.75
ITGB3BP-211ENST00000478538 CLEC11AQ9Y240 323 aa10.36□□□□□ -0.75
ITGB3BP-211ENST00000478538 SPDYE2BA6NHP3 402 aa10.34□□□□□ -0.75
ITGB3BP-211ENST00000478538 SPDYE6P0CI01 402 aa10.34□□□□□ -0.75
ITGB3BP-211ENST00000478538 SPDYE2Q495Y8 402 aa10.34□□□□□ -0.75
ITGB3BP-211ENST00000478538 SPDYE4A6NLX3 237 aa10.32□□□□□ -0.76
ITGB3BP-211ENST00000478538 FBLN2P98095 1184 aa10.3□□□□□ -0.76
ITGB3BP-211ENST00000478538 PROM2Q8N271 834 aa10.29□□□□□ -0.76
ITGB3BP-211ENST00000478538 SPDYE1Q8NFV5 336 aaPredicted RBP10.29□□□□□ -0.76
ITGB3BP-211ENST00000478538 CHADLQ6NUI6 762 aa10.26□□□□□ -0.77
ITGB3BP-211ENST00000478538 SLC24A1O60721 1099 aa10.24□□□□□ -0.77
ITGB3BP-211ENST00000478538 FBXO3Q9UK99 471 aa10.24□□□□□ -0.77
ITGB3BP-211ENST00000478538 POTEIP0CG38 1075 aa10.2□□□□□ -0.78
ITGB3BP-211ENST00000478538 PLSCR2Q9NRY7 297 aa10.2□□□□□ -0.78
ITGB3BP-211ENST00000478538 SSUH2Q9Y2M2 353 aa10.19□□□□□ -0.78
ITGB3BP-211ENST00000478538 ZNF692Q9BU19 519 aaPredicted RBP10.16□□□□□ -0.78
ITGB3BP-211ENST00000478538 VASPP50552 380 aaPredicted RBP10.12□□□□□ -0.79
ITGB3BP-211ENST00000478538 CD44P16070 742 aaKnown RBP10.08□□□□□ -0.8
ITGB3BP-211ENST00000478538 PRR29P0C7W0 189 aa10.07□□□□□ -0.8
ITGB3BP-211ENST00000478538 PABPN1Q86U42 306 aaKnown RBP eCLIP10.03□□□□□ -0.8
ITGB3BP-211ENST00000478538 IFNLR1Q8IU57 520 aaPredicted RBP10□□□□□ -0.81
ITGB3BP-211ENST00000478538 FARP1Q9Y4F1 1045 aaPredicted RBP9.99□□□□□ -0.81
ITGB3BP-211ENST00000478538 DCBLD2Q96PD2 775 aa9.95□□□□□ -0.82
ITGB3BP-211ENST00000478538 OTUD5Q96G74 571 aa9.9□□□□□ -0.82
ITGB3BP-211ENST00000478538 CLCN6P51797 869 aa9.88□□□□□ -0.83
ITGB3BP-211ENST00000478538 ZNF579Q8NAF0 562 aaKnown RBP9.88□□□□□ -0.83
ITGB3BP-211ENST00000478538 POTEB2H3BUK9 544 aa9.87□□□□□ -0.83
ITGB3BP-211ENST00000478538 GALR2O43603 387 aaPredicted RBP9.86□□□□□ -0.83
ITGB3BP-211ENST00000478538 STAG3Q9UJ98 1225 aa9.86□□□□□ -0.83
ITGB3BP-211ENST00000478538 POTEMA6NI47 508 aa9.85□□□□□ -0.83
ITGB3BP-211ENST00000478538 ZRANB1Q9UGI0 708 aa9.85□□□□□ -0.83
ITGB3BP-211ENST00000478538 PKD2Q13563 968 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms