RNA–Protein interactions for RNA: ENST00000478160.1

NMD3-209, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 3

Gene NMD3, Length 606 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-209ENST00000478160 AEBP2Q6ZN18 517 aaPredicted RBP25.3■■□□□ 1.64
NMD3-209ENST00000478160 CHIC1Q5VXU3 224 aa23.62■■□□□ 1.37
NMD3-209ENST00000478160 SENP3Q9H4L4 574 aaPredicted RBP21.62■■□□□ 1.05
NMD3-209ENST00000478160 PHF23Q9BUL5 403 aaPredicted RBP21.32■■□□□ 1
NMD3-209ENST00000478160 FOXD1Q16676 465 aa20.25■□□□□ 0.83
NMD3-209ENST00000478160 POTEDQ86YR6 584 aa19.49■□□□□ 0.71
NMD3-209ENST00000478160 MSH5O43196 834 aa19.09■□□□□ 0.65
NMD3-209ENST00000478160 PIAS4Q8N2W9 510 aaPredicted RBP18.83■□□□□ 0.6
NMD3-209ENST00000478160 PLPPR3Q6T4P5 718 aa18.59■□□□□ 0.57
NMD3-209ENST00000478160 PPP6R1Q9UPN7 881 aa18.59■□□□□ 0.57
NMD3-209ENST00000478160 ADRA2BP18089 450 aa18.53■□□□□ 0.56
NMD3-209ENST00000478160 MAPK8IP2Q13387 824 aaPredicted RBP17.18■□□□□ 0.34
NMD3-209ENST00000478160 DMRT2Q9Y5R5 561 aa17.07■□□□□ 0.32
NMD3-209ENST00000478160 SCAF1Q9H7N4 1312 aaKnown RBP16.9■□□□□ 0.3
NMD3-209ENST00000478160 CACNB1Q02641 598 aaPredicted RBP16.76■□□□□ 0.27
NMD3-209ENST00000478160 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
NMD3-209ENST00000478160 PPP4R3CPQ6ZMV5 832 aa16.26■□□□□ 0.19
NMD3-209ENST00000478160 RNF39Q9H2S5 420 aa16.25■□□□□ 0.19
NMD3-209ENST00000478160 HOXD11P31277 338 aaPredicted RBP16.23■□□□□ 0.19
NMD3-209ENST00000478160 CNKSR2Q8WXI2 1034 aa16.04■□□□□ 0.16
NMD3-209ENST00000478160 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
NMD3-209ENST00000478160 C1QBPQ07021 282 aaKnown RBP15.98■□□□□ 0.15
NMD3-209ENST00000478160 DNAJC5BQ9UF47 199 aa15.68■□□□□ 0.1
NMD3-209ENST00000478160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.57■□□□□ 0.08
NMD3-209ENST00000478160 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
NMD3-209ENST00000478160 NPM3O75607 178 aaKnown RBP15.26■□□□□ 0.03
NMD3-209ENST00000478160 POTEHQ6S545 545 aa15.18■□□□□ 0.02
NMD3-209ENST00000478160 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
NMD3-209ENST00000478160 CAPN15O75808 1086 aa15.13■□□□□ 0.01
NMD3-209ENST00000478160 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
NMD3-209ENST00000478160 DSG3P32926 999 aa15.08■□□□□ 0
NMD3-209ENST00000478160 TRHP20396 242 aaPredicted RBP14.79□□□□□ -0.04
NMD3-209ENST00000478160 ABCB7O75027 752 aa14.74□□□□□ -0.05
NMD3-209ENST00000478160 SLC4A2P04920 1241 aa14.7□□□□□ -0.06
NMD3-209ENST00000478160 APLP2Q06481 763 aa14.64□□□□□ -0.07
NMD3-209ENST00000478160 ZNF219Q9P2Y4 722 aaPredicted RBP14.64□□□□□ -0.07
NMD3-209ENST00000478160 KCNA4P22459 653 aa14.58□□□□□ -0.08
NMD3-209ENST00000478160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
NMD3-209ENST00000478160 HNRNPUL2Q1KMD3 747 aaKnown RBP14.51□□□□□ -0.09
NMD3-209ENST00000478160 SAMD1Q6SPF0 538 aaPredicted RBP14.42□□□□□ -0.1
NMD3-209ENST00000478160 RBM42Q9BTD8 480 aaKnown RBP14.39□□□□□ -0.11
NMD3-209ENST00000478160 CHRDL2Q6WN34 429 aa14.29□□□□□ -0.12
NMD3-209ENST00000478160 POLA2Q14181 598 aa14.24□□□□□ -0.13
NMD3-209ENST00000478160 MYCNP04198 464 aaPredicted RBP14.11□□□□□ -0.15
NMD3-209ENST00000478160 SP7Q8TDD2 431 aaPredicted RBP14□□□□□ -0.17
NMD3-209ENST00000478160 AKT1S1Q96B36 256 aa13.95□□□□□ -0.18
NMD3-209ENST00000478160 ATF5Q9Y2D1 282 aaPredicted RBP13.87□□□□□ -0.19
NMD3-209ENST00000478160 REM2Q8IYK8 340 aaPredicted RBP13.86□□□□□ -0.19
NMD3-209ENST00000478160 PIP4P2Q8N4L2 257 aa13.85□□□□□ -0.19
NMD3-209ENST00000478160 ZBTB12Q9Y330 459 aaPredicted RBP13.84□□□□□ -0.19
NMD3-209ENST00000478160 OSCARQ8IYS5 282 aa13.8□□□□□ -0.2
NMD3-209ENST00000478160 HAX1O00165 279 aa13.79□□□□□ -0.2
NMD3-209ENST00000478160 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
NMD3-209ENST00000478160 FOXD4L1Q9NU39 408 aa13.72□□□□□ -0.21
NMD3-209ENST00000478160 SLC4A1APQ9BWU0 796 aaKnown RBP13.67□□□□□ -0.22
NMD3-209ENST00000478160 FXR2P51116 673 aaKnown RBP eCLIP13.65□□□□□ -0.22
NMD3-209ENST00000478160 EVX2Q03828 476 aa13.56□□□□□ -0.24
NMD3-209ENST00000478160 SPDYE2BA6NHP3 402 aa13.38□□□□□ -0.27
NMD3-209ENST00000478160 SPDYE6P0CI01 402 aa13.38□□□□□ -0.27
NMD3-209ENST00000478160 PRKAR2AP13861 404 aaKnown RBP13.38□□□□□ -0.27
NMD3-209ENST00000478160 SPDYE2Q495Y8 402 aa13.38□□□□□ -0.27
NMD3-209ENST00000478160 CLEC11AQ9Y240 323 aa13.38□□□□□ -0.27
NMD3-209ENST00000478160 ZBTB22O15209 634 aa13.37□□□□□ -0.27
NMD3-209ENST00000478160 FBLN2P98095 1184 aa13.35□□□□□ -0.27
NMD3-209ENST00000478160 SPDYE1Q8NFV5 336 aaPredicted RBP13.29□□□□□ -0.28
NMD3-209ENST00000478160 ATXN8OSP0DMR3 200 aa13.28□□□□□ -0.28
NMD3-209ENST00000478160 C19orf67A6NJJ6 358 aa13.24□□□□□ -0.29
NMD3-209ENST00000478160 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
NMD3-209ENST00000478160 GABBR2O75899 941 aa13.2□□□□□ -0.3
NMD3-209ENST00000478160 MKRN4PQ13434 485 aaPredicted RBP13.18□□□□□ -0.3
NMD3-209ENST00000478160 CHADLQ6NUI6 762 aa13.16□□□□□ -0.3
NMD3-209ENST00000478160 LHX8Q68G74 356 aa13.15□□□□□ -0.3
NMD3-209ENST00000478160 SSUH2Q9Y2M2 353 aa13.13□□□□□ -0.31
NMD3-209ENST00000478160 PRR29P0C7W0 189 aa13.05□□□□□ -0.32
NMD3-209ENST00000478160 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
NMD3-209ENST00000478160 CD44P16070 742 aaKnown RBP12.92□□□□□ -0.34
NMD3-209ENST00000478160 POTEIP0CG38 1075 aa12.91□□□□□ -0.34
NMD3-209ENST00000478160 FARP1Q9Y4F1 1045 aaPredicted RBP12.86□□□□□ -0.35
NMD3-209ENST00000478160 PLSCR2Q9NRY7 297 aa12.8□□□□□ -0.36
NMD3-209ENST00000478160 DCBLD2Q96PD2 775 aa12.78□□□□□ -0.36
NMD3-209ENST00000478160 CLCN6P51797 869 aa12.72□□□□□ -0.37
NMD3-209ENST00000478160 EHMT2Q96KQ7 1210 aa12.71□□□□□ -0.37
NMD3-209ENST00000478160 ZRANB1Q9UGI0 708 aa12.69□□□□□ -0.38
NMD3-209ENST00000478160 ZNF579Q8NAF0 562 aaKnown RBP12.64□□□□□ -0.39
NMD3-209ENST00000478160 GALR2O43603 387 aaPredicted RBP12.59□□□□□ -0.39
NMD3-209ENST00000478160 CREBZFQ9NS37 354 aa12.58□□□□□ -0.4
NMD3-209ENST00000478160 OTUD5Q96G74 571 aa12.52□□□□□ -0.41
NMD3-209ENST00000478160 POTEB2H3BUK9 544 aa12.49□□□□□ -0.41
NMD3-209ENST00000478160 STAG3Q9UJ98 1225 aa12.49□□□□□ -0.41
NMD3-209ENST00000478160 PHF12Q96QT6 1004 aa12.47□□□□□ -0.41
NMD3-209ENST00000478160 PAK3O75914 559 aaPredicted RBP12.46□□□□□ -0.41
NMD3-209ENST00000478160 POTEMA6NI47 508 aa12.41□□□□□ -0.42
NMD3-209ENST00000478160 PELP1Q8IZL8 1130 aaKnown RBP12.39□□□□□ -0.43
NMD3-209ENST00000478160 POTEGQ6S5H5 508 aa12.37□□□□□ -0.43
NMD3-209ENST00000478160 CSRNP3Q8WYN3 585 aa12.35□□□□□ -0.43
NMD3-209ENST00000478160 SPDYE4A6NLX3 237 aa12.34□□□□□ -0.43
NMD3-209ENST00000478160 NPM1P06748 294 aaKnown RBP eCLIP12.33□□□□□ -0.44
NMD3-209ENST00000478160 METRNQ9UJH8 293 aa12.28□□□□□ -0.44
NMD3-209ENST00000478160 MNX1P50219 401 aaPredicted RBP12.27□□□□□ -0.45
NMD3-209ENST00000478160 MS4A3Q96HJ5 214 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms