RNA–Protein interactions for RNA: ENST00000477926.1

CPA3-202, Transcript of carboxypeptidase A3, humanhuman

TSL 3

Gene CPA3, Length 546 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA3-202ENST00000477926 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
CPA3-202ENST00000477926 AEBP2Q6ZN18 517 aaPredicted RBP24.16■■□□□ 1.46
CPA3-202ENST00000477926 PHF23Q9BUL5 403 aaPredicted RBP21.34■■□□□ 1.01
CPA3-202ENST00000477926 SENP3Q9H4L4 574 aaPredicted RBP20.42■□□□□ 0.86
CPA3-202ENST00000477926 PLPPR3Q6T4P5 718 aa19.92■□□□□ 0.78
CPA3-202ENST00000477926 FOXD1Q16676 465 aa18.87■□□□□ 0.61
CPA3-202ENST00000477926 ADRA2BP18089 450 aa18.64■□□□□ 0.57
CPA3-202ENST00000477926 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
CPA3-202ENST00000477926 PIAS4Q8N2W9 510 aaPredicted RBP17.93■□□□□ 0.46
CPA3-202ENST00000477926 KCNA4P22459 653 aa17.88■□□□□ 0.45
CPA3-202ENST00000477926 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
CPA3-202ENST00000477926 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
CPA3-202ENST00000477926 EHMT2Q96KQ7 1210 aa17.31■□□□□ 0.36
CPA3-202ENST00000477926 MSH5O43196 834 aa17.18■□□□□ 0.34
CPA3-202ENST00000477926 SLC4A1APQ9BWU0 796 aaKnown RBP17.14■□□□□ 0.33
CPA3-202ENST00000477926 SCAF1Q9H7N4 1312 aaKnown RBP17.09■□□□□ 0.33
CPA3-202ENST00000477926 NPM3O75607 178 aaKnown RBP17.08■□□□□ 0.32
CPA3-202ENST00000477926 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
CPA3-202ENST00000477926 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
CPA3-202ENST00000477926 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
CPA3-202ENST00000477926 RNF216Q9NWF9 866 aaPredicted RBP16.53■□□□□ 0.24
CPA3-202ENST00000477926 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
CPA3-202ENST00000477926 ZBTB22O15209 634 aa16.45■□□□□ 0.22
CPA3-202ENST00000477926 DMRT2Q9Y5R5 561 aa16.4■□□□□ 0.22
CPA3-202ENST00000477926 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
CPA3-202ENST00000477926 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
CPA3-202ENST00000477926 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
CPA3-202ENST00000477926 MYCNP04198 464 aaPredicted RBP15.76■□□□□ 0.11
CPA3-202ENST00000477926 POTEDQ86YR6 584 aa15.73■□□□□ 0.11
CPA3-202ENST00000477926 ATXN8OSP0DMR3 200 aa15.7■□□□□ 0.1
CPA3-202ENST00000477926 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
CPA3-202ENST00000477926 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.53■□□□□ 0.08
CPA3-202ENST00000477926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
CPA3-202ENST00000477926 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
CPA3-202ENST00000477926 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
CPA3-202ENST00000477926 U3KPZ7 1027 aaPredicted RBP15.33■□□□□ 0.04
CPA3-202ENST00000477926 ATF5Q9Y2D1 282 aaPredicted RBP15.3■□□□□ 0.04
CPA3-202ENST00000477926 FKBP8Q14318 412 aa15.2■□□□□ 0.02
CPA3-202ENST00000477926 APLP2Q06481 763 aa15.06■□□□□ 0
CPA3-202ENST00000477926 ZNF219Q9P2Y4 722 aaPredicted RBP15.01□□□□□ -0.01
CPA3-202ENST00000477926 AMER1Q5JTC6 1135 aaPredicted RBP14.92□□□□□ -0.02
CPA3-202ENST00000477926 RTN4Q9NQC3 1192 aaKnown RBP14.88□□□□□ -0.03
CPA3-202ENST00000477926 RNF39Q9H2S5 420 aa14.78□□□□□ -0.04
CPA3-202ENST00000477926 TRHP20396 242 aaPredicted RBP14.72□□□□□ -0.05
CPA3-202ENST00000477926 SPINK5Q9NQ38 1064 aaPredicted RBP14.72□□□□□ -0.05
CPA3-202ENST00000477926 MKRN4PQ13434 485 aaPredicted RBP14.66□□□□□ -0.06
CPA3-202ENST00000477926 C1QBPQ07021 282 aaKnown RBP14.65□□□□□ -0.06
CPA3-202ENST00000477926 CAPN15O75808 1086 aa14.64□□□□□ -0.07
CPA3-202ENST00000477926 SPDYE4A6NLX3 237 aa14.63□□□□□ -0.07
CPA3-202ENST00000477926 POLA2Q14181 598 aa14.63□□□□□ -0.07
CPA3-202ENST00000477926 FBLN2P98095 1184 aa14.62□□□□□ -0.07
CPA3-202ENST00000477926 FBXO3Q9UK99 471 aa14.53□□□□□ -0.08
CPA3-202ENST00000477926 PROM2Q8N271 834 aa14.48□□□□□ -0.09
CPA3-202ENST00000477926 ZBTB12Q9Y330 459 aaPredicted RBP14.43□□□□□ -0.1
CPA3-202ENST00000477926 SLC24A1O60721 1099 aa14.42□□□□□ -0.1
CPA3-202ENST00000477926 ABCB7O75027 752 aa14.4□□□□□ -0.1
CPA3-202ENST00000477926 VASPP50552 380 aaPredicted RBP14.28□□□□□ -0.12
CPA3-202ENST00000477926 DSG3P32926 999 aa14.27□□□□□ -0.13
CPA3-202ENST00000477926 IFNLR1Q8IU57 520 aaPredicted RBP14.15□□□□□ -0.14
CPA3-202ENST00000477926 ZNF692Q9BU19 519 aaPredicted RBP14.13□□□□□ -0.15
CPA3-202ENST00000477926 SPDYE2BA6NHP3 402 aa14.09□□□□□ -0.15
CPA3-202ENST00000477926 SPDYE6P0CI01 402 aa14.09□□□□□ -0.15
CPA3-202ENST00000477926 SPDYE2Q495Y8 402 aa14.09□□□□□ -0.15
CPA3-202ENST00000477926 OSCARQ8IYS5 282 aa14.07□□□□□ -0.16
CPA3-202ENST00000477926 SSUH2Q9Y2M2 353 aa14.04□□□□□ -0.16
CPA3-202ENST00000477926 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
CPA3-202ENST00000477926 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.17
CPA3-202ENST00000477926 CACNB1Q02641 598 aaPredicted RBP13.95□□□□□ -0.18
CPA3-202ENST00000477926 KLHL34Q8N239 644 aa13.92□□□□□ -0.18
CPA3-202ENST00000477926 PKD2Q13563 968 aa13.91□□□□□ -0.18
CPA3-202ENST00000477926 SPOCK2Q92563 424 aa13.89□□□□□ -0.19
CPA3-202ENST00000477926 PLCD3Q8N3E9 789 aa13.86□□□□□ -0.19
CPA3-202ENST00000477926 MIER1Q8N108 512 aa13.82□□□□□ -0.2
CPA3-202ENST00000477926 DCAF8L2P0C7V8 631 aa13.81□□□□□ -0.2
CPA3-202ENST00000477926 PLCB2Q00722 1185 aa13.78□□□□□ -0.2
CPA3-202ENST00000477926 PLEKHG5O94827 1062 aa13.71□□□□□ -0.21
CPA3-202ENST00000477926 ECM2O94769 699 aaPredicted RBP13.7□□□□□ -0.22
CPA3-202ENST00000477926 ZBTB47Q9UFB7 747 aaPredicted RBP13.68□□□□□ -0.22
CPA3-202ENST00000477926 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
CPA3-202ENST00000477926 HAP1P54257 671 aaPredicted RBP13.56□□□□□ -0.24
CPA3-202ENST00000477926 CIZ1Q9ULV3 898 aaPredicted RBP13.56□□□□□ -0.24
CPA3-202ENST00000477926 RGL2O15211 777 aa13.55□□□□□ -0.24
CPA3-202ENST00000477926 BBXQ8WY36 941 aaPredicted RBP13.55□□□□□ -0.24
CPA3-202ENST00000477926 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
CPA3-202ENST00000477926 SPDYE1Q8NFV5 336 aaPredicted RBP13.53□□□□□ -0.24
CPA3-202ENST00000477926 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.52□□□□□ -0.25
CPA3-202ENST00000477926 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
CPA3-202ENST00000477926 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
CPA3-202ENST00000477926 GSE1Q14687 1217 aa13.43□□□□□ -0.26
CPA3-202ENST00000477926 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
CPA3-202ENST00000477926 PRR29P0C7W0 189 aa13.41□□□□□ -0.26
CPA3-202ENST00000477926 REM2Q8IYK8 340 aaPredicted RBP13.41□□□□□ -0.26
CPA3-202ENST00000477926 VSIG10Q8N0Z9 540 aa13.41□□□□□ -0.26
CPA3-202ENST00000477926 NUBP1P53384 320 aa13.4□□□□□ -0.26
CPA3-202ENST00000477926 PAXIP1Q6ZW49 1069 aaPredicted RBP13.39□□□□□ -0.27
CPA3-202ENST00000477926 CREBZFQ9NS37 354 aa13.37□□□□□ -0.27
CPA3-202ENST00000477926 CHGAP10645 457 aaKnown RBP13.36□□□□□ -0.27
CPA3-202ENST00000477926 CFAP44Q96MT7 982 aa13.36□□□□□ -0.27
CPA3-202ENST00000477926 DCAF8Q5TAQ9 597 aa13.34□□□□□ -0.27
CPA3-202ENST00000477926 SPRYD3Q8NCJ5 442 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms